data_6ME5 # _model_server_result.job_id ZXtvNxB1Um6pgHoIOvMMSw _model_server_result.datetime_utc '2024-11-04 18:12:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6me5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 6ME5 # _exptl.entry_id 6ME5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.301 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[2-(7-methoxynaphthalen-1-yl)ethyl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ME5 _cell.length_a 122.2 _cell.length_b 122.2 _cell.length_c 122.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ME5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 91 A CYS 100 1_555 A SG CYS 168 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 A C ASP 212 A ASP 1003 1_555 A N YCM 213 A YCM 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C YCM 213 A YCM 1004 1_555 A N SER 214 A SER 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? # _chem_comp.formula 'C15 H17 N O2' _chem_comp.formula_weight 243.301 _chem_comp.id AWY _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[2-(7-methoxynaphthalen-1-yl)ethyl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C13 AWY doub 70 n y C14 C9 AWY sing 71 n y C8 C9 AWY doub 72 n y C8 C7 AWY sing 73 n y C13 C12 AWY sing 74 n y C9 C10 AWY sing 75 n y C7 C6 AWY doub 76 n y C12 O2 AWY sing 77 n n C12 C11 AWY doub 78 n y O2 C15 AWY sing 79 n n C10 C11 AWY sing 80 n y C10 C5 AWY doub 81 n y C6 C5 AWY sing 82 n y C5 C4 AWY sing 83 n n C4 C3 AWY sing 84 n n C3 N1 AWY sing 85 n n N1 C2 AWY sing 86 n n C2 C1 AWY sing 87 n n C2 O1 AWY doub 88 n n N1 H1 AWY sing 89 n n C4 H2 AWY sing 90 n n C4 H3 AWY sing 91 n n C6 H4 AWY sing 92 n n C7 H5 AWY sing 93 n n C8 H6 AWY sing 94 n n C13 H7 AWY sing 95 n n C15 H8 AWY sing 96 n n C15 H9 AWY sing 97 n n C15 H10 AWY sing 98 n n C1 H11 AWY sing 99 n n C1 H12 AWY sing 100 n n C1 H13 AWY sing 101 n n C3 H14 AWY sing 102 n n C3 H15 AWY sing 103 n n C11 H16 AWY sing 104 n n C14 H17 AWY sing 105 n n # _atom_sites.entry_id 6ME5 _atom_sites.fract_transf_matrix[1][1] 0.008183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AWY A 1 1201 999 AWY RES . C 3 OLA A 1 1202 1202 OLA OLA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AWY . . . B 2 24.602 -20.525 47.283 1 105.67 ? N1 AWY 1201 A 1 HETATM 2 C C4 AWY . . . B 2 23.801 -22.77 46.659 1 106.11 ? C4 AWY 1201 A 1 HETATM 3 C C5 AWY . . . B 2 23.949 -24.012 47.311 1 105.84 ? C5 AWY 1201 A 1 HETATM 4 C C6 AWY . . . B 2 22.788 -24.744 47.624 1 104.71 ? C6 AWY 1201 A 1 HETATM 5 C C7 AWY . . . B 2 22.881 -25.975 48.28 1 104.01 ? C7 AWY 1201 A 1 HETATM 6 C C8 AWY . . . B 2 24.134 -26.489 48.629 1 104.06 ? C8 AWY 1201 A 1 HETATM 7 C C10 AWY . . . B 2 25.22 -24.549 47.638 1 105.38 ? C10 AWY 1201 A 1 HETATM 8 C C13 AWY . . . B 2 27.722 -25.642 48.355 1 104.31 ? C13 AWY 1201 A 1 HETATM 9 C C15 AWY . . . B 2 28.823 -22.339 47.193 1 105.83 ? C15 AWY 1201 A 1 HETATM 10 C C1 AWY . . . B 2 25.278 -18.305 46.623 1 106.7 ? C1 AWY 1201 A 1 HETATM 11 C C2 AWY . . . B 2 24.171 -19.271 47.039 1 106.11 ? C2 AWY 1201 A 1 HETATM 12 O O1 AWY . . . B 2 23.001 -18.883 47.116 1 105.73 ? O1 AWY 1201 A 1 HETATM 13 C C3 AWY . . . B 2 23.709 -21.623 47.684 1 106.11 ? C3 AWY 1201 A 1 HETATM 14 C C9 AWY . . . B 2 25.3 -25.789 48.308 1 104.51 ? C9 AWY 1201 A 1 HETATM 15 C C11 AWY . . . B 2 26.418 -23.878 47.334 1 105.09 ? C11 AWY 1201 A 1 HETATM 16 C C12 AWY . . . B 2 27.667 -24.401 47.711 1 105.08 ? C12 AWY 1201 A 1 HETATM 17 C C14 AWY . . . B 2 26.541 -26.312 48.685 1 104.25 ? C14 AWY 1201 A 1 HETATM 18 O O2 AWY . . . B 2 28.857 -23.766 47.402 1 105.83 ? O2 AWY 1201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 18 #