data_6ME9 # _model_server_result.job_id xYMm77noPq9xLzFTv3Qc1w _model_server_result.datetime_utc '2024-11-23 02:19:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6me9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2201}' # _entry.id 6ME9 # _exptl.entry_id 6ME9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 259.343 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[(8S)-1,6,7,8-tetrahydro-2H-indeno[5,4-b]furan-8-yl]ethyl}propanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.2 _cell.angle_gamma 90 _cell.entry_id 6ME9 _cell.length_a 69.4 _cell.length_b 145.7 _cell.length_c 77.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ME9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 189 A CYS 113 1_555 A SG CYS 266 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 189 B CYS 113 1_555 B SG CYS 266 B CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 A SG CYS 313 A CYS 1005 1_555 D ZN ZN . A ZN 2202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc2 A SG CYS 316 A CYS 1008 1_555 D ZN ZN . A ZN 2202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc3 A SG CYS 346 A CYS 1038 1_555 D ZN ZN . A ZN 2202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc4 A SG CYS 349 A CYS 1041 1_555 D ZN ZN . A ZN 2202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? # _chem_comp.formula 'C16 H21 N O2' _chem_comp.formula_weight 259.343 _chem_comp.id JEV _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[(8S)-1,6,7,8-tetrahydro-2H-indeno[5,4-b]furan-8-yl]ethyl}propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ramelteon # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C3 JEV doub 171 n n C1 C2 JEV sing 172 n n C3 C2 JEV sing 173 n n C3 N1 JEV sing 174 n n C4 N1 JEV sing 175 n n C4 C5 JEV sing 176 n n C5 C6 JEV sing 177 n n C7 C6 JEV sing 178 n n C7 C8 JEV sing 179 n n C6 C16 JEV sing 180 n n C8 C9 JEV sing 181 n n C16 C9 JEV doub 182 n y C16 C13 JEV sing 183 n y C9 C10 JEV sing 184 n y C13 C14 JEV sing 185 n n C13 C12 JEV doub 186 n y C10 C11 JEV doub 187 n y C14 C15 JEV sing 188 n n C12 C11 JEV sing 189 n y C12 O1 JEV sing 190 n n C15 O1 JEV sing 191 n n C4 H1 JEV sing 192 n n C4 H2 JEV sing 193 n n C2 H3 JEV sing 194 n n C2 H4 JEV sing 195 n n C1 H5 JEV sing 196 n n C1 H6 JEV sing 197 n n C1 H7 JEV sing 198 n n C7 H8 JEV sing 199 n n C7 H9 JEV sing 200 n n C8 H10 JEV sing 201 n n C8 H11 JEV sing 202 n n C10 H12 JEV sing 203 n n C11 H13 JEV sing 204 n n C15 H14 JEV sing 205 n n C15 H15 JEV sing 206 n n C14 H16 JEV sing 207 n n C14 H17 JEV sing 208 n n C6 H18 JEV sing 209 n n C5 H19 JEV sing 210 n n C5 H20 JEV sing 211 n n N1 H21 JEV sing 212 n n # _atom_sites.entry_id 6ME9 _atom_sites.fract_transf_matrix[1][1] 0.014409 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004186 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JEV A 1 2201 1 JEV RES . D 3 ZN A 1 2202 3 ZN ZN . E 2 JEV B 1 2201 2 JEV RES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 JEV . . . C 2 31.627 -32.027 132.431 1 93.71 ? C4 JEV 2201 A 1 HETATM 2 C C3 JEV . . . C 2 29.865 -33.765 132.234 1 95.45 ? C3 JEV 2201 A 1 HETATM 3 C C2 JEV . . . C 2 28.511 -34.221 132.779 1 95.56 ? C2 JEV 2201 A 1 HETATM 4 O O2 JEV . . . C 2 30.421 -34.397 131.333 1 96.15 ? O2 JEV 2201 A 1 HETATM 5 C C1 JEV . . . C 2 27.398 -33.735 131.847 1 95.12 ? C1 JEV 2201 A 1 HETATM 6 O O1 JEV . . . C 2 32.698 -32.824 138.557 1 96.01 ? O1 JEV 2201 A 1 HETATM 7 C C7 JEV . . . C 2 35.005 -31.522 133.21 1 94.55 ? C7 JEV 2201 A 1 HETATM 8 C C8 JEV . . . C 2 35.933 -32.357 134.07 1 94.84 ? C8 JEV 2201 A 1 HETATM 9 C C9 JEV . . . C 2 35.293 -32.546 135.299 1 94.59 ? C9 JEV 2201 A 1 HETATM 10 C C10 JEV . . . C 2 35.8 -33.028 136.506 1 94.19 ? C10 JEV 2201 A 1 HETATM 11 C C11 JEV . . . C 2 34.98 -33.123 137.627 1 94.78 ? C11 JEV 2201 A 1 HETATM 12 C C12 JEV . . . C 2 33.627 -32.775 137.557 1 95.45 ? C12 JEV 2201 A 1 HETATM 13 C C15 JEV . . . C 2 31.533 -32.119 138.087 1 95.56 ? C15 JEV 2201 A 1 HETATM 14 C C14 JEV . . . C 2 31.678 -32.068 136.575 1 95.13 ? C14 JEV 2201 A 1 HETATM 15 C C13 JEV . . . C 2 33.123 -32.33 136.351 1 95.03 ? C13 JEV 2201 A 1 HETATM 16 C C16 JEV . . . C 2 33.939 -32.22 135.214 1 94.64 ? C16 JEV 2201 A 1 HETATM 17 C C6 JEV . . . C 2 33.644 -31.729 133.828 1 94.21 ? C6 JEV 2201 A 1 HETATM 18 C C5 JEV . . . C 2 32.821 -32.75 133.044 1 93.41 ? C5 JEV 2201 A 1 HETATM 19 N N1 JEV . . . C 2 30.367 -32.67 132.835 1 94.39 ? N1 JEV 2201 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 48 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #