data_6MFC # _model_server_result.job_id YS-kGTMMZF_OZNF0OjE0RQ _model_server_result.datetime_utc '2024-11-13 17:05:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mfc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 6MFC # _exptl.entry_id 6MFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MFC _cell.length_a 138.334 _cell.length_b 145.7 _cell.length_c 78.006 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 166 n n C1 C2 GOL sing 167 n n C1 H11 GOL sing 168 n n C1 H12 GOL sing 169 n n O1 HO1 GOL sing 170 n n C2 O2 GOL sing 171 n n C2 C3 GOL sing 172 n n C2 H2 GOL sing 173 n n O2 HO2 GOL sing 174 n n C3 O3 GOL sing 175 n n C3 H31 GOL sing 176 n n C3 H32 GOL sing 177 n n O3 HO3 GOL sing 178 n n # _atom_sites.entry_id 6MFC _atom_sites.fract_transf_matrix[1][1] 0.007229 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 801 3 GOL GOL . D 2 GOL B 1 802 4 GOL GOL . E 3 1PE B 1 803 2 1PE 1PE . F 2 GOL A 1 801 2 GOL GOL . G 3 1PE A 1 802 1 1PE 1PE . H 4 HOH B 1 901 79 HOH HOH . H 4 HOH B 2 902 2 HOH HOH . H 4 HOH B 3 903 101 HOH HOH . H 4 HOH B 4 904 93 HOH HOH . H 4 HOH B 5 905 52 HOH HOH . H 4 HOH B 6 906 8 HOH HOH . H 4 HOH B 7 907 11 HOH HOH . H 4 HOH B 8 908 84 HOH HOH . H 4 HOH B 9 909 97 HOH HOH . H 4 HOH B 10 910 64 HOH HOH . H 4 HOH B 11 911 87 HOH HOH . H 4 HOH B 12 912 6 HOH HOH . H 4 HOH B 13 913 102 HOH HOH . H 4 HOH B 14 914 100 HOH HOH . H 4 HOH B 15 915 5 HOH HOH . H 4 HOH B 16 916 36 HOH HOH . H 4 HOH B 17 917 24 HOH HOH . H 4 HOH B 18 918 96 HOH HOH . H 4 HOH B 19 919 98 HOH HOH . H 4 HOH B 20 920 56 HOH HOH . H 4 HOH B 21 921 33 HOH HOH . H 4 HOH B 22 922 31 HOH HOH . H 4 HOH B 23 923 58 HOH HOH . H 4 HOH B 24 924 38 HOH HOH . I 4 HOH A 1 901 99 HOH HOH . I 4 HOH A 2 902 78 HOH HOH . I 4 HOH A 3 903 80 HOH HOH . I 4 HOH A 4 904 104 HOH HOH . I 4 HOH A 5 905 14 HOH HOH . I 4 HOH A 6 906 32 HOH HOH . I 4 HOH A 7 907 42 HOH HOH . I 4 HOH A 8 908 10 HOH HOH . I 4 HOH A 9 909 92 HOH HOH . I 4 HOH A 10 910 70 HOH HOH . I 4 HOH A 11 911 23 HOH HOH . I 4 HOH A 12 912 7 HOH HOH . I 4 HOH A 13 913 103 HOH HOH . I 4 HOH A 14 914 67 HOH HOH . I 4 HOH A 15 915 65 HOH HOH . I 4 HOH A 16 916 75 HOH HOH . I 4 HOH A 17 917 77 HOH HOH . I 4 HOH A 18 918 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 22.705 7.262 -11.899 1 131.06 ? C1 GOL 802 B 1 HETATM 2 O O1 GOL . . . D 2 21.643 6.819 -12.684 1 135.46 ? O1 GOL 802 B 1 HETATM 3 C C2 GOL . . . D 2 23.893 6.317 -12.181 1 125.85 ? C2 GOL 802 B 1 HETATM 4 O O2 GOL . . . D 2 24.983 6.591 -11.366 1 121.9 ? O2 GOL 802 B 1 HETATM 5 C C3 GOL . . . D 2 24.209 6.523 -13.682 1 127.69 ? C3 GOL 802 B 1 HETATM 6 O O3 GOL . . . D 2 24.238 7.896 -13.905 1 133.96 ? O3 GOL 802 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #