data_6MFW # _model_server_result.job_id zFq9A8f5Epg1D-iC1gJ4jQ _model_server_result.datetime_utc '2024-11-23 08:53:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mfw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1304}' # _entry.id 6MFW # _exptl.entry_id 6MFW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 117.146 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description VALINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MFW _cell.length_a 66.37 _cell.length_b 133.87 _cell.length_c 162.099 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MFW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 731 A SER 729 1_555 B P18 JQG . A JQG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? metalc ? metalc1 D O2G APC . A APC 1303 1_555 G MG MG . A MG 1306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 D O1B APC . A APC 1303 1_555 G MG MG . A MG 1306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc3 G MG MG . A MG 1306 1_555 H O HOH . A HOH 1420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc4 G MG MG . A MG 1306 1_555 H O HOH . A HOH 1484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc5 G MG MG . A MG 1306 1_555 H O HOH . A HOH 1532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? # _chem_comp.formula 'C5 H11 N O2' _chem_comp.formula_weight 117.146 _chem_comp.id VAL _chem_comp.mon_nstd_flag y _chem_comp.name VALINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA VAL sing 534 n n N H VAL sing 535 n n N H2 VAL sing 536 n n CA C VAL sing 537 n n CA CB VAL sing 538 n n CA HA VAL sing 539 n n C O VAL doub 540 n n C OXT VAL sing 541 n n CB CG1 VAL sing 542 n n CB CG2 VAL sing 543 n n CB HB VAL sing 544 n n CG1 HG11 VAL sing 545 n n CG1 HG12 VAL sing 546 n n CG1 HG13 VAL sing 547 n n CG2 HG21 VAL sing 548 n n CG2 HG22 VAL sing 549 n n CG2 HG23 VAL sing 550 n n OXT HXT VAL sing 551 n n # _atom_sites.entry_id 6MFW _atom_sites.fract_transf_matrix[1][1] 0.015067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00747 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006169 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JQG A 1 1301 2000 JQG FPE . C 3 FON A 1 1302 2001 FON FON . D 4 APC A 1 1303 2002 APC APC . E 5 VAL A 1 1304 2003 VAL VAL . F 6 PO4 A 1 1305 1 PO4 PO4 . G 7 MG A 1 1306 2 MG MG . H 8 HOH A 1 1401 121 HOH HOH . H 8 HOH A 2 1402 34 HOH HOH . H 8 HOH A 3 1403 60 HOH HOH . H 8 HOH A 4 1404 1 HOH HOH . H 8 HOH A 5 1405 155 HOH HOH . H 8 HOH A 6 1406 163 HOH HOH . H 8 HOH A 7 1407 112 HOH HOH . H 8 HOH A 8 1408 19 HOH HOH . H 8 HOH A 9 1409 180 HOH HOH . H 8 HOH A 10 1410 48 HOH HOH . H 8 HOH A 11 1411 7 HOH HOH . H 8 HOH A 12 1412 61 HOH HOH . H 8 HOH A 13 1413 20 HOH HOH . H 8 HOH A 14 1414 183 HOH HOH . H 8 HOH A 15 1415 114 HOH HOH . H 8 HOH A 16 1416 105 HOH HOH . H 8 HOH A 17 1417 29 HOH HOH . H 8 HOH A 18 1418 27 HOH HOH . H 8 HOH A 19 1419 135 HOH HOH . H 8 HOH A 20 1420 177 HOH HOH . H 8 HOH A 21 1421 16 HOH HOH . H 8 HOH A 22 1422 75 HOH HOH . H 8 HOH A 23 1423 179 HOH HOH . H 8 HOH A 24 1424 43 HOH HOH . H 8 HOH A 25 1425 6 HOH HOH . H 8 HOH A 26 1426 185 HOH HOH . H 8 HOH A 27 1427 147 HOH HOH . H 8 HOH A 28 1428 65 HOH HOH . H 8 HOH A 29 1429 52 HOH HOH . H 8 HOH A 30 1430 13 HOH HOH . H 8 HOH A 31 1431 139 HOH HOH . H 8 HOH A 32 1432 127 HOH HOH . H 8 HOH A 33 1433 146 HOH HOH . H 8 HOH A 34 1434 45 HOH HOH . H 8 HOH A 35 1435 2 HOH HOH . H 8 HOH A 36 1436 4 HOH HOH . H 8 HOH A 37 1437 148 HOH HOH . H 8 HOH A 38 1438 150 HOH HOH . H 8 HOH A 39 1439 78 HOH HOH . H 8 HOH A 40 1440 39 HOH HOH . H 8 HOH A 41 1441 84 HOH HOH . H 8 HOH A 42 1442 47 HOH HOH . H 8 HOH A 43 1443 136 HOH HOH . H 8 HOH A 44 1444 58 HOH HOH . H 8 HOH A 45 1445 74 HOH HOH . H 8 HOH A 46 1446 54 HOH HOH . H 8 HOH A 47 1447 108 HOH HOH . H 8 HOH A 48 1448 126 HOH HOH . H 8 HOH A 49 1449 32 HOH HOH . H 8 HOH A 50 1450 131 HOH HOH . H 8 HOH A 51 1451 73 HOH HOH . H 8 HOH A 52 1452 138 HOH HOH . H 8 HOH A 53 1453 101 HOH HOH . H 8 HOH A 54 1454 93 HOH HOH . H 8 HOH A 55 1455 41 HOH HOH . H 8 HOH A 56 1456 49 HOH HOH . H 8 HOH A 57 1457 143 HOH HOH . H 8 HOH A 58 1458 12 HOH HOH . H 8 HOH A 59 1459 113 HOH HOH . H 8 HOH A 60 1460 57 HOH HOH . H 8 HOH A 61 1461 149 HOH HOH . H 8 HOH A 62 1462 96 HOH HOH . H 8 HOH A 63 1463 24 HOH HOH . H 8 HOH A 64 1464 11 HOH HOH . H 8 HOH A 65 1465 28 HOH HOH . H 8 HOH A 66 1466 164 HOH HOH . H 8 HOH A 67 1467 165 HOH HOH . H 8 HOH A 68 1468 77 HOH HOH . H 8 HOH A 69 1469 76 HOH HOH . H 8 HOH A 70 1470 31 HOH HOH . H 8 HOH A 71 1471 46 HOH HOH . H 8 HOH A 72 1472 137 HOH HOH . H 8 HOH A 73 1473 5 HOH HOH . H 8 HOH A 74 1474 15 HOH HOH . H 8 HOH A 75 1475 117 HOH HOH . H 8 HOH A 76 1476 66 HOH HOH . H 8 HOH A 77 1477 82 HOH HOH . H 8 HOH A 78 1478 55 HOH HOH . H 8 HOH A 79 1479 53 HOH HOH . H 8 HOH A 80 1480 59 HOH HOH . H 8 HOH A 81 1481 33 HOH HOH . H 8 HOH A 82 1482 72 HOH HOH . H 8 HOH A 83 1483 22 HOH HOH . H 8 HOH A 84 1484 26 HOH HOH . H 8 HOH A 85 1485 124 HOH HOH . H 8 HOH A 86 1486 156 HOH HOH . H 8 HOH A 87 1487 86 HOH HOH . H 8 HOH A 88 1488 116 HOH HOH . H 8 HOH A 89 1489 71 HOH HOH . H 8 HOH A 90 1490 91 HOH HOH . H 8 HOH A 91 1491 133 HOH HOH . H 8 HOH A 92 1492 67 HOH HOH . H 8 HOH A 93 1493 175 HOH HOH . H 8 HOH A 94 1494 23 HOH HOH . H 8 HOH A 95 1495 44 HOH HOH . H 8 HOH A 96 1496 119 HOH HOH . H 8 HOH A 97 1497 161 HOH HOH . H 8 HOH A 98 1498 50 HOH HOH . H 8 HOH A 99 1499 17 HOH HOH . H 8 HOH A 100 1500 132 HOH HOH . H 8 HOH A 101 1501 69 HOH HOH . H 8 HOH A 102 1502 178 HOH HOH . H 8 HOH A 103 1503 9 HOH HOH . H 8 HOH A 104 1504 36 HOH HOH . H 8 HOH A 105 1505 81 HOH HOH . H 8 HOH A 106 1506 40 HOH HOH . H 8 HOH A 107 1507 70 HOH HOH . H 8 HOH A 108 1508 21 HOH HOH . H 8 HOH A 109 1509 176 HOH HOH . H 8 HOH A 110 1510 90 HOH HOH . H 8 HOH A 111 1511 142 HOH HOH . H 8 HOH A 112 1512 56 HOH HOH . H 8 HOH A 113 1513 158 HOH HOH . H 8 HOH A 114 1514 100 HOH HOH . H 8 HOH A 115 1515 151 HOH HOH . H 8 HOH A 116 1516 120 HOH HOH . H 8 HOH A 117 1517 122 HOH HOH . H 8 HOH A 118 1518 3 HOH HOH . H 8 HOH A 119 1519 92 HOH HOH . H 8 HOH A 120 1520 10 HOH HOH . H 8 HOH A 121 1521 153 HOH HOH . H 8 HOH A 122 1522 79 HOH HOH . H 8 HOH A 123 1523 18 HOH HOH . H 8 HOH A 124 1524 51 HOH HOH . H 8 HOH A 125 1525 125 HOH HOH . H 8 HOH A 126 1526 118 HOH HOH . H 8 HOH A 127 1527 109 HOH HOH . H 8 HOH A 128 1528 157 HOH HOH . H 8 HOH A 129 1529 35 HOH HOH . H 8 HOH A 130 1530 8 HOH HOH . H 8 HOH A 131 1531 14 HOH HOH . H 8 HOH A 132 1532 162 HOH HOH . H 8 HOH A 133 1533 128 HOH HOH . H 8 HOH A 134 1534 63 HOH HOH . H 8 HOH A 135 1535 85 HOH HOH . H 8 HOH A 136 1536 141 HOH HOH . H 8 HOH A 137 1537 87 HOH HOH . H 8 HOH A 138 1538 152 HOH HOH . H 8 HOH A 139 1539 182 HOH HOH . H 8 HOH A 140 1540 38 HOH HOH . H 8 HOH A 141 1541 107 HOH HOH . H 8 HOH A 142 1542 25 HOH HOH . H 8 HOH A 143 1543 42 HOH HOH . H 8 HOH A 144 1544 167 HOH HOH . H 8 HOH A 145 1545 170 HOH HOH . H 8 HOH A 146 1546 159 HOH HOH . H 8 HOH A 147 1547 169 HOH HOH . H 8 HOH A 148 1548 123 HOH HOH . H 8 HOH A 149 1549 103 HOH HOH . H 8 HOH A 150 1550 89 HOH HOH . H 8 HOH A 151 1551 160 HOH HOH . H 8 HOH A 152 1552 95 HOH HOH . H 8 HOH A 153 1553 30 HOH HOH . H 8 HOH A 154 1554 134 HOH HOH . H 8 HOH A 155 1555 97 HOH HOH . H 8 HOH A 156 1556 83 HOH HOH . H 8 HOH A 157 1557 184 HOH HOH . H 8 HOH A 158 1558 64 HOH HOH . H 8 HOH A 159 1559 168 HOH HOH . H 8 HOH A 160 1560 99 HOH HOH . H 8 HOH A 161 1561 88 HOH HOH . H 8 HOH A 162 1562 171 HOH HOH . H 8 HOH A 163 1563 154 HOH HOH . H 8 HOH A 164 1564 106 HOH HOH . H 8 HOH A 165 1565 172 HOH HOH . H 8 HOH A 166 1566 145 HOH HOH . H 8 HOH A 167 1567 111 HOH HOH . H 8 HOH A 168 1568 187 HOH HOH . H 8 HOH A 169 1569 186 HOH HOH . H 8 HOH A 170 1570 144 HOH HOH . H 8 HOH A 171 1571 104 HOH HOH . H 8 HOH A 172 1572 174 HOH HOH . H 8 HOH A 173 1573 37 HOH HOH . H 8 HOH A 174 1574 130 HOH HOH . H 8 HOH A 175 1575 80 HOH HOH . H 8 HOH A 176 1576 115 HOH HOH . H 8 HOH A 177 1577 110 HOH HOH . H 8 HOH A 178 1578 129 HOH HOH . H 8 HOH A 179 1579 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N VAL . . . E 5 10.048 -9.925 -12.472 1 62.58 ? N VAL 1304 A 1 HETATM 2 C CA VAL . . . E 5 11.334 -9.206 -12.722 1 51.17 ? CA VAL 1304 A 1 HETATM 3 C C VAL . . . E 5 12.496 -10.125 -12.328 1 63.36 ? C VAL 1304 A 1 HETATM 4 O O VAL . . . E 5 12.327 -11.346 -12.454 1 74.85 ? O VAL 1304 A 1 HETATM 5 C CB VAL . . . E 5 11.39 -7.871 -11.953 1 43.17 ? CB VAL 1304 A 1 HETATM 6 C CG1 VAL . . . E 5 10.22 -6.966 -12.308 1 56.33 ? CG1 VAL 1304 A 1 HETATM 7 C CG2 VAL . . . E 5 11.463 -8.089 -10.45 1 52.17 ? CG2 VAL 1304 A 1 HETATM 8 O OXT VAL . . . E 5 13.536 -9.618 -11.907 1 60.91 ? OXT VAL 1304 A 1 HETATM 9 H HA VAL . . . E 5 11.399 -9.018 -13.675 1 61.46 ? HA VAL 1304 A 1 HETATM 10 H HB VAL . . . E 5 12.22 -7.409 -12.228 1 51.87 ? HB VAL 1304 A 1 HETATM 11 H HG11 VAL . . . E 5 10.311 -6.119 -11.837 1 67.65 ? HG11 VAL 1304 A 1 HETATM 12 H HG12 VAL . . . E 5 10.214 -6.804 -13.267 1 67.65 ? HG12 VAL 1304 A 1 HETATM 13 H HG13 VAL . . . E 5 9.386 -7.394 -12.047 1 67.65 ? HG13 VAL 1304 A 1 HETATM 14 H HG21 VAL . . . E 5 11.18 -7.28 -9.99 1 62.67 ? HG21 VAL 1304 A 1 HETATM 15 H HG22 VAL . . . E 5 10.878 -8.825 -10.199 1 62.67 ? HG22 VAL 1304 A 1 HETATM 16 H HG23 VAL . . . E 5 12.378 -8.302 -10.196 1 62.67 ? HG23 VAL 1304 A 1 # _model_server_stats.io_time_ms 113 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 16 #