data_6MFY # _model_server_result.job_id 1ifUO4n9Y4uAmn5wOJcDkg _model_server_result.datetime_utc '2024-11-26 21:44:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mfy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1801}' # _entry.id 6MFY # _exptl.entry_id 6MFY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.348 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-PHOSPHOPANTETHEINE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MFY _cell.length_a 89.863 _cell.length_b 141.114 _cell.length_c 171.532 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MFY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 731 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 729 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P24 _struct_conn.ptnr2_label_comp_id PNS _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PNS _struct_conn.ptnr2_auth_seq_id 1801 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.645 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H23 N2 O7 P S' _chem_comp.formula_weight 358.348 _chem_comp.id PNS _chem_comp.mon_nstd_flag . _chem_comp.name "4'-PHOSPHOPANTETHEINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 P24 PNS sing 260 n n O23 HOP1 PNS sing 261 n n P24 O25 PNS sing 262 n n P24 O26 PNS doub 263 n n P24 O27 PNS sing 264 n n O25 HOP2 PNS sing 265 n n O27 C28 PNS sing 266 n n C28 C29 PNS sing 267 n n C28 H282 PNS sing 268 n n C28 H281 PNS sing 269 n n C29 C30 PNS sing 270 n n C29 C31 PNS sing 271 n n C29 C32 PNS sing 272 n n C30 H303 PNS sing 273 n n C30 H302 PNS sing 274 n n C30 H301 PNS sing 275 n n C31 H313 PNS sing 276 n n C31 H312 PNS sing 277 n n C31 H311 PNS sing 278 n n C32 O33 PNS sing 279 n n C32 C34 PNS sing 280 n n C32 H32 PNS sing 281 n n O33 H33 PNS sing 282 n n C34 O35 PNS doub 283 n n C34 N36 PNS sing 284 n n N36 C37 PNS sing 285 n n N36 H36 PNS sing 286 n n C37 C38 PNS sing 287 n n C37 H372 PNS sing 288 n n C37 H371 PNS sing 289 n n C38 C39 PNS sing 290 n n C38 H382 PNS sing 291 n n C38 H381 PNS sing 292 n n C39 O40 PNS doub 293 n n C39 N41 PNS sing 294 n n N41 C42 PNS sing 295 n n N41 H41 PNS sing 296 n n C42 C43 PNS sing 297 n n C42 H422 PNS sing 298 n n C42 H421 PNS sing 299 n n C43 S44 PNS sing 300 n n C43 H431 PNS sing 301 n n C43 H432 PNS sing 302 n n S44 H44 PNS sing 303 n n # _atom_sites.entry_id 6MFY _atom_sites.fract_transf_matrix[1][1] 0.011128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007086 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PNS A 1 1801 2000 PNS PNS . C 3 PO4 A 1 1802 1 PO4 PO4 . D 3 PO4 A 1 1803 2 PO4 PO4 . E 3 PO4 A 1 1804 3 PO4 PO4 . F 3 PO4 A 1 1805 5 PO4 PO4 . G 3 PO4 A 1 1806 6 PO4 PO4 . H 3 PO4 A 1 1807 7 PO4 PO4 . I 3 PO4 A 1 1808 8 PO4 PO4 . J 3 PO4 A 1 1809 9 PO4 PO4 . K 3 PO4 A 1 1810 10 PO4 PO4 . L 3 PO4 A 1 1811 11 PO4 PO4 . M 4 HOH A 1 1901 95 HOH HOH . M 4 HOH A 2 1902 16 HOH HOH . M 4 HOH A 3 1903 33 HOH HOH . M 4 HOH A 4 1904 6 HOH HOH . M 4 HOH A 5 1905 76 HOH HOH . M 4 HOH A 6 1906 89 HOH HOH . M 4 HOH A 7 1907 25 HOH HOH . M 4 HOH A 8 1908 57 HOH HOH . M 4 HOH A 9 1909 91 HOH HOH . M 4 HOH A 10 1910 63 HOH HOH . M 4 HOH A 11 1911 82 HOH HOH . M 4 HOH A 12 1912 26 HOH HOH . M 4 HOH A 13 1913 68 HOH HOH . M 4 HOH A 14 1914 50 HOH HOH . M 4 HOH A 15 1915 69 HOH HOH . M 4 HOH A 16 1916 7 HOH HOH . M 4 HOH A 17 1917 12 HOH HOH . M 4 HOH A 18 1918 15 HOH HOH . M 4 HOH A 19 1919 73 HOH HOH . M 4 HOH A 20 1920 1 HOH HOH . M 4 HOH A 21 1921 30 HOH HOH . M 4 HOH A 22 1922 54 HOH HOH . M 4 HOH A 23 1923 18 HOH HOH . M 4 HOH A 24 1924 32 HOH HOH . M 4 HOH A 25 1925 85 HOH HOH . M 4 HOH A 26 1926 8 HOH HOH . M 4 HOH A 27 1927 14 HOH HOH . M 4 HOH A 28 1928 67 HOH HOH . M 4 HOH A 29 1929 61 HOH HOH . M 4 HOH A 30 1930 88 HOH HOH . M 4 HOH A 31 1931 9 HOH HOH . M 4 HOH A 32 1932 74 HOH HOH . M 4 HOH A 33 1933 5 HOH HOH . M 4 HOH A 34 1934 59 HOH HOH . M 4 HOH A 35 1935 49 HOH HOH . M 4 HOH A 36 1936 87 HOH HOH . M 4 HOH A 37 1937 47 HOH HOH . M 4 HOH A 38 1938 35 HOH HOH . M 4 HOH A 39 1939 13 HOH HOH . M 4 HOH A 40 1940 36 HOH HOH . M 4 HOH A 41 1941 3 HOH HOH . M 4 HOH A 42 1942 52 HOH HOH . M 4 HOH A 43 1943 37 HOH HOH . M 4 HOH A 44 1944 34 HOH HOH . M 4 HOH A 45 1945 80 HOH HOH . M 4 HOH A 46 1946 81 HOH HOH . M 4 HOH A 47 1947 99 HOH HOH . M 4 HOH A 48 1948 72 HOH HOH . M 4 HOH A 49 1949 27 HOH HOH . M 4 HOH A 50 1950 46 HOH HOH . M 4 HOH A 51 1951 84 HOH HOH . M 4 HOH A 52 1952 48 HOH HOH . M 4 HOH A 53 1953 56 HOH HOH . M 4 HOH A 54 1954 20 HOH HOH . M 4 HOH A 55 1955 83 HOH HOH . M 4 HOH A 56 1956 2 HOH HOH . M 4 HOH A 57 1957 66 HOH HOH . M 4 HOH A 58 1958 79 HOH HOH . M 4 HOH A 59 1959 64 HOH HOH . M 4 HOH A 60 1960 58 HOH HOH . M 4 HOH A 61 1961 53 HOH HOH . M 4 HOH A 62 1962 21 HOH HOH . M 4 HOH A 63 1963 4 HOH HOH . M 4 HOH A 64 1964 70 HOH HOH . M 4 HOH A 65 1965 28 HOH HOH . M 4 HOH A 66 1966 41 HOH HOH . M 4 HOH A 67 1967 55 HOH HOH . M 4 HOH A 68 1968 39 HOH HOH . M 4 HOH A 69 1969 40 HOH HOH . M 4 HOH A 70 1970 94 HOH HOH . M 4 HOH A 71 1971 97 HOH HOH . M 4 HOH A 72 1972 23 HOH HOH . M 4 HOH A 73 1973 44 HOH HOH . M 4 HOH A 74 1974 10 HOH HOH . M 4 HOH A 75 1975 78 HOH HOH . M 4 HOH A 76 1976 45 HOH HOH . M 4 HOH A 77 1977 17 HOH HOH . M 4 HOH A 78 1978 62 HOH HOH . M 4 HOH A 79 1979 31 HOH HOH . M 4 HOH A 80 1980 90 HOH HOH . M 4 HOH A 81 1981 92 HOH HOH . M 4 HOH A 82 1982 60 HOH HOH . M 4 HOH A 83 1983 29 HOH HOH . M 4 HOH A 84 1984 22 HOH HOH . M 4 HOH A 85 1985 19 HOH HOH . M 4 HOH A 86 1986 71 HOH HOH . M 4 HOH A 87 1987 24 HOH HOH . M 4 HOH A 88 1988 86 HOH HOH . M 4 HOH A 89 1989 98 HOH HOH . M 4 HOH A 90 1990 11 HOH HOH . M 4 HOH A 91 1991 93 HOH HOH . M 4 HOH A 92 1992 38 HOH HOH . M 4 HOH A 93 1993 43 HOH HOH . M 4 HOH A 94 1994 42 HOH HOH . M 4 HOH A 95 1995 77 HOH HOH . M 4 HOH A 96 1996 102 HOH HOH . M 4 HOH A 97 1997 100 HOH HOH . M 4 HOH A 98 1998 96 HOH HOH . M 4 HOH A 99 1999 51 HOH HOH . M 4 HOH A 100 2000 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O23 PNS . . . B 2 199.598 34.958 -26.018 1 47.93 ? O23 PNS 1801 A 1 HETATM 2 P P24 PNS . . . B 2 200.529 36.083 -26.696 1 45.36 ? P24 PNS 1801 A 1 HETATM 3 O O26 PNS . . . B 2 199.613 37.245 -27.331 1 47.15 -1 O26 PNS 1801 A 1 HETATM 4 O O27 PNS . . . B 2 201.519 36.696 -25.581 1 46.02 ? O27 PNS 1801 A 1 HETATM 5 C C28 PNS . . . B 2 202.62 37.455 -25.996 1 47.18 ? C28 PNS 1801 A 1 HETATM 6 C C29 PNS . . . B 2 203.665 37.498 -24.879 1 49.83 ? C29 PNS 1801 A 1 HETATM 7 C C30 PNS . . . B 2 204.621 38.663 -25.128 1 49.24 ? C30 PNS 1801 A 1 HETATM 8 C C31 PNS . . . B 2 202.964 37.698 -23.536 1 47.22 ? C31 PNS 1801 A 1 HETATM 9 C C32 PNS . . . B 2 204.437 36.179 -24.862 1 52.28 ? C32 PNS 1801 A 1 HETATM 10 O O33 PNS . . . B 2 204.98 35.939 -26.13 1 56.1 ? O33 PNS 1801 A 1 HETATM 11 C C34 PNS . . . B 2 205.575 36.236 -23.843 1 52.42 ? C34 PNS 1801 A 1 HETATM 12 O O35 PNS . . . B 2 206.686 36.407 -24.22 1 51.18 ? O35 PNS 1801 A 1 HETATM 13 N N36 PNS . . . B 2 205.303 36.081 -22.423 1 49.92 ? N36 PNS 1801 A 1 HETATM 14 C C37 PNS . . . B 2 206.397 36.133 -21.47 1 48.79 ? C37 PNS 1801 A 1 HETATM 15 C C38 PNS . . . B 2 206.074 37.102 -20.335 1 46.6 ? C38 PNS 1801 A 1 HETATM 16 C C39 PNS . . . B 2 207.295 37.189 -19.424 1 47.48 ? C39 PNS 1801 A 1 HETATM 17 O O40 PNS . . . B 2 208.301 36.653 -19.75 1 48.18 ? O40 PNS 1801 A 1 HETATM 18 N N41 PNS . . . B 2 207.247 37.911 -18.166 1 50.02 ? N41 PNS 1801 A 1 HETATM 19 C C42 PNS . . . B 2 208.443 37.948 -17.347 1 50.77 ? C42 PNS 1801 A 1 HETATM 20 C C43 PNS . . . B 2 208.378 39.069 -16.315 1 54.36 ? C43 PNS 1801 A 1 HETATM 21 S S44 PNS . . . B 2 209.994 39.201 -15.491 1 53.98 ? S44 PNS 1801 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 21 #