data_6MHD # _model_server_result.job_id mKoLmQipP5BnshdJmJNgeQ _model_server_result.datetime_utc '2024-12-03 17:26:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mhd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6MHD # _exptl.entry_id 6MHD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.401 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(3-methyl-1,2-oxazol-5-yl)methyl]-N-(4-phenyl-1,3-thiazol-2-yl)propanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.73 _cell.angle_gamma 90 _cell.entry_id 6MHD _cell.length_a 60.159 _cell.length_b 71.06 _cell.length_c 60.443 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MHD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 35 A CYS 32 1_555 C C2 JRD . A JRD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? covale ? covale2 B SG CYS 35 B CYS 32 1_555 F C2 JRD . B JRD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? # _chem_comp.formula 'C17 H17 N3 O2 S' _chem_comp.formula_weight 327.401 _chem_comp.id JRD _chem_comp.mon_nstd_flag . _chem_comp.name N-[(3-methyl-1,2-oxazol-5-yl)methyl]-N-(4-phenyl-1,3-thiazol-2-yl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C8 JRD sing 182 n n C7 C8 JRD sing 183 n y C7 C6 JRD doub 184 n y C8 N1 JRD doub 185 n y C6 C5 JRD sing 186 n n C6 O1 JRD sing 187 n y N1 O1 JRD sing 188 n y C5 N JRD sing 189 n n C1 C2 JRD sing 190 n n C1 C JRD sing 191 n n C N JRD sing 192 n n C O JRD doub 193 n n N C10 JRD sing 194 n n N2 C10 JRD doub 195 n y N2 C11 JRD sing 196 n y C10 S1 JRD sing 197 n y C13 C14 JRD doub 198 n y C13 C12 JRD sing 199 n y C14 C15 JRD sing 200 n y C11 C12 JRD sing 201 n n C11 C18 JRD doub 202 n y C12 C17 JRD doub 203 n y C15 C16 JRD doub 204 n y S1 C18 JRD sing 205 n y C17 C16 JRD sing 206 n y C1 H JRD sing 207 n n C1 H1 JRD sing 208 n n C2 H2 JRD sing 209 n n C2 H4 JRD sing 210 n n C5 H10 JRD sing 211 n n C5 H9 JRD sing 212 n n C9 H13 JRD sing 213 n n C9 H12 JRD sing 214 n n C9 H14 JRD sing 215 n n C7 H11 JRD sing 216 n n C18 H20 JRD sing 217 n n C17 H19 JRD sing 218 n n C16 H18 JRD sing 219 n n C15 H17 JRD sing 220 n n C14 H16 JRD sing 221 n n C13 H15 JRD sing 222 n n C2 H3 JRD sing 223 n n # _atom_sites.entry_id 6MHD _atom_sites.fract_transf_matrix[1][1] 0.016623 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007656 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JRD A 1 401 401 JRD 044 . D 3 MES A 1 402 1 MES MES . E 4 ACN A 1 403 1 ACN ACN . F 2 JRD B 1 301 402 JRD 044 . G 3 MES B 1 302 2 MES MES . H 4 ACN B 1 303 4 ACN ACN . I 5 HOH A 1 501 167 HOH HOH . I 5 HOH A 2 502 3 HOH HOH . I 5 HOH A 3 503 14 HOH HOH . I 5 HOH A 4 504 39 HOH HOH . I 5 HOH A 5 505 62 HOH HOH . I 5 HOH A 6 506 125 HOH HOH . I 5 HOH A 7 507 25 HOH HOH . I 5 HOH A 8 508 154 HOH HOH . I 5 HOH A 9 509 18 HOH HOH . I 5 HOH A 10 510 101 HOH HOH . I 5 HOH A 11 511 91 HOH HOH . I 5 HOH A 12 512 121 HOH HOH . I 5 HOH A 13 513 170 HOH HOH . I 5 HOH A 14 514 1 HOH HOH . I 5 HOH A 15 515 2 HOH HOH . I 5 HOH A 16 516 6 HOH HOH . I 5 HOH A 17 517 28 HOH HOH . I 5 HOH A 18 518 30 HOH HOH . I 5 HOH A 19 519 48 HOH HOH . I 5 HOH A 20 520 129 HOH HOH . I 5 HOH A 21 521 16 HOH HOH . I 5 HOH A 22 522 66 HOH HOH . I 5 HOH A 23 523 112 HOH HOH . I 5 HOH A 24 524 157 HOH HOH . I 5 HOH A 25 525 150 HOH HOH . I 5 HOH A 26 526 43 HOH HOH . I 5 HOH A 27 527 103 HOH HOH . I 5 HOH A 28 528 140 HOH HOH . I 5 HOH A 29 529 106 HOH HOH . I 5 HOH A 30 530 19 HOH HOH . I 5 HOH A 31 531 85 HOH HOH . I 5 HOH A 32 532 169 HOH HOH . I 5 HOH A 33 533 119 HOH HOH . I 5 HOH A 34 534 59 HOH HOH . I 5 HOH A 35 535 73 HOH HOH . I 5 HOH A 36 536 35 HOH HOH . I 5 HOH A 37 537 79 HOH HOH . I 5 HOH A 38 538 122 HOH HOH . I 5 HOH A 39 539 26 HOH HOH . I 5 HOH A 40 540 90 HOH HOH . I 5 HOH A 41 541 50 HOH HOH . I 5 HOH A 42 542 165 HOH HOH . I 5 HOH A 43 543 64 HOH HOH . I 5 HOH A 44 544 143 HOH HOH . I 5 HOH A 45 545 38 HOH HOH . I 5 HOH A 46 546 178 HOH HOH . I 5 HOH A 47 547 159 HOH HOH . I 5 HOH A 48 548 41 HOH HOH . I 5 HOH A 49 549 128 HOH HOH . I 5 HOH A 50 550 52 HOH HOH . I 5 HOH A 51 551 171 HOH HOH . I 5 HOH A 52 552 131 HOH HOH . I 5 HOH A 53 553 9 HOH HOH . I 5 HOH A 54 554 7 HOH HOH . I 5 HOH A 55 555 40 HOH HOH . I 5 HOH A 56 556 33 HOH HOH . I 5 HOH A 57 557 42 HOH HOH . I 5 HOH A 58 558 57 HOH HOH . I 5 HOH A 59 559 4 HOH HOH . I 5 HOH A 60 560 20 HOH HOH . I 5 HOH A 61 561 47 HOH HOH . I 5 HOH A 62 562 176 HOH HOH . I 5 HOH A 63 563 49 HOH HOH . I 5 HOH A 64 564 108 HOH HOH . I 5 HOH A 65 565 76 HOH HOH . I 5 HOH A 66 566 58 HOH HOH . I 5 HOH A 67 567 61 HOH HOH . I 5 HOH A 68 568 138 HOH HOH . I 5 HOH A 69 569 113 HOH HOH . I 5 HOH A 70 570 177 HOH HOH . I 5 HOH A 71 571 142 HOH HOH . I 5 HOH A 72 572 32 HOH HOH . I 5 HOH A 73 573 46 HOH HOH . I 5 HOH A 74 574 93 HOH HOH . I 5 HOH A 75 575 89 HOH HOH . I 5 HOH A 76 576 110 HOH HOH . I 5 HOH A 77 577 158 HOH HOH . I 5 HOH A 78 578 15 HOH HOH . I 5 HOH A 79 579 147 HOH HOH . I 5 HOH A 80 580 148 HOH HOH . I 5 HOH A 81 581 172 HOH HOH . I 5 HOH A 82 582 124 HOH HOH . I 5 HOH A 83 583 173 HOH HOH . I 5 HOH A 84 584 74 HOH HOH . I 5 HOH A 85 585 31 HOH HOH . I 5 HOH A 86 586 136 HOH HOH . I 5 HOH A 87 587 141 HOH HOH . I 5 HOH A 88 588 153 HOH HOH . I 5 HOH A 89 589 126 HOH HOH . I 5 HOH A 90 590 111 HOH HOH . J 5 HOH B 1 401 163 HOH HOH . J 5 HOH B 2 402 166 HOH HOH . J 5 HOH B 3 403 132 HOH HOH . J 5 HOH B 4 404 87 HOH HOH . J 5 HOH B 5 405 65 HOH HOH . J 5 HOH B 6 406 37 HOH HOH . J 5 HOH B 7 407 12 HOH HOH . J 5 HOH B 8 408 162 HOH HOH . J 5 HOH B 9 409 11 HOH HOH . J 5 HOH B 10 410 17 HOH HOH . J 5 HOH B 11 411 27 HOH HOH . J 5 HOH B 12 412 29 HOH HOH . J 5 HOH B 13 413 130 HOH HOH . J 5 HOH B 14 414 168 HOH HOH . J 5 HOH B 15 415 10 HOH HOH . J 5 HOH B 16 416 105 HOH HOH . J 5 HOH B 17 417 69 HOH HOH . J 5 HOH B 18 418 56 HOH HOH . J 5 HOH B 19 419 94 HOH HOH . J 5 HOH B 20 420 117 HOH HOH . J 5 HOH B 21 421 22 HOH HOH . J 5 HOH B 22 422 116 HOH HOH . J 5 HOH B 23 423 100 HOH HOH . J 5 HOH B 24 424 70 HOH HOH . J 5 HOH B 25 425 23 HOH HOH . J 5 HOH B 26 426 102 HOH HOH . J 5 HOH B 27 427 78 HOH HOH . J 5 HOH B 28 428 36 HOH HOH . J 5 HOH B 29 429 45 HOH HOH . J 5 HOH B 30 430 175 HOH HOH . J 5 HOH B 31 431 144 HOH HOH . J 5 HOH B 32 432 107 HOH HOH . J 5 HOH B 33 433 34 HOH HOH . J 5 HOH B 34 434 21 HOH HOH . J 5 HOH B 35 435 72 HOH HOH . J 5 HOH B 36 436 54 HOH HOH . J 5 HOH B 37 437 160 HOH HOH . J 5 HOH B 38 438 60 HOH HOH . J 5 HOH B 39 439 133 HOH HOH . J 5 HOH B 40 440 51 HOH HOH . J 5 HOH B 41 441 80 HOH HOH . J 5 HOH B 42 442 8 HOH HOH . J 5 HOH B 43 443 13 HOH HOH . J 5 HOH B 44 444 120 HOH HOH . J 5 HOH B 45 445 67 HOH HOH . J 5 HOH B 46 446 53 HOH HOH . J 5 HOH B 47 447 55 HOH HOH . J 5 HOH B 48 448 83 HOH HOH . J 5 HOH B 49 449 75 HOH HOH . J 5 HOH B 50 450 161 HOH HOH . J 5 HOH B 51 451 81 HOH HOH . J 5 HOH B 52 452 164 HOH HOH . J 5 HOH B 53 453 115 HOH HOH . J 5 HOH B 54 454 118 HOH HOH . J 5 HOH B 55 455 63 HOH HOH . J 5 HOH B 56 456 86 HOH HOH . J 5 HOH B 57 457 68 HOH HOH . J 5 HOH B 58 458 109 HOH HOH . J 5 HOH B 59 459 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O JRD . . . C 2 28.462 3.952 10.363 1 42.73 ? O JRD 401 A 1 HETATM 2 C C JRD . . . C 2 27.592 4.113 9.52 1 43.97 ? C JRD 401 A 1 HETATM 3 C C1 JRD . . . C 2 27.402 3.126 8.388 1 41.68 ? C1 JRD 401 A 1 HETATM 4 C C2 JRD . . . C 2 28.16 1.835 8.612 1 36.34 ? C2 JRD 401 A 1 HETATM 5 N N JRD . . . C 2 26.772 5.259 9.574 1 46.13 ? N JRD 401 A 1 HETATM 6 C C5 JRD . . . C 2 26.424 5.9 8.305 1 46.61 ? C5 JRD 401 A 1 HETATM 7 C C6 JRD . . . C 2 24.982 6.253 8.201 1 49.36 ? C6 JRD 401 A 1 HETATM 8 O O1 JRD . . . C 2 24.603 7.538 8.354 1 53.52 ? O1 JRD 401 A 1 HETATM 9 N N1 JRD . . . C 2 23.186 7.596 8.285 1 53.91 ? N1 JRD 401 A 1 HETATM 10 C C8 JRD . . . C 2 22.78 6.322 8.084 1 49.8 ? C8 JRD 401 A 1 HETATM 11 C C9 JRD . . . C 2 21.331 5.953 7.998 1 45.56 ? C9 JRD 401 A 1 HETATM 12 C C7 JRD . . . C 2 23.903 5.481 8.019 1 47.97 ? C7 JRD 401 A 1 HETATM 13 C C10 JRD . . . C 2 26.589 5.993 10.746 1 45.05 ? C10 JRD 401 A 1 HETATM 14 S S1 JRD . . . C 2 26.937 5.366 12.331 1 42.9 ? S1 JRD 401 A 1 HETATM 15 C C18 JRD . . . C 2 26.175 6.769 12.978 1 43.84 ? C18 JRD 401 A 1 HETATM 16 C C11 JRD . . . C 2 25.729 7.593 11.992 1 44.82 ? C11 JRD 401 A 1 HETATM 17 N N2 JRD . . . C 2 25.998 7.154 10.716 1 44.94 ? N2 JRD 401 A 1 HETATM 18 C C12 JRD . . . C 2 24.921 8.815 12.144 1 46.72 ? C12 JRD 401 A 1 HETATM 19 C C17 JRD . . . C 2 23.992 8.926 13.176 1 45.9 ? C17 JRD 401 A 1 HETATM 20 C C16 JRD . . . C 2 23.07 9.959 13.18 1 45.52 ? C16 JRD 401 A 1 HETATM 21 C C15 JRD . . . C 2 23.116 10.94 12.212 1 45.6 ? C15 JRD 401 A 1 HETATM 22 C C14 JRD . . . C 2 24.057 10.867 11.208 1 45.87 ? C14 JRD 401 A 1 HETATM 23 C C13 JRD . . . C 2 24.948 9.809 11.161 1 45.94 ? C13 JRD 401 A 1 HETATM 24 H H JRD . . . C 2 26.359 2.919 8.155 1 43.98 ? H JRD 401 A 1 HETATM 25 H H1 JRD . . . C 2 27.791 3.598 7.488 1 43.98 ? H1 JRD 401 A 1 HETATM 26 H H2 JRD . . . C 2 29.199 2.017 8.881 1 43.98 ? H2 JRD 401 A 1 HETATM 27 H H4 JRD . . . C 2 28.199 1.264 7.687 1 43.98 ? H4 JRD 401 A 1 HETATM 28 H H10 JRD . . . C 2 26.966 6.838 8.203 1 43.98 ? H10 JRD 401 A 1 HETATM 29 H H9 JRD . . . C 2 26.675 5.355 7.398 1 43.98 ? H9 JRD 401 A 1 HETATM 30 H H13 JRD . . . C 2 21.174 4.885 7.853 1 43.98 ? H13 JRD 401 A 1 HETATM 31 H H12 JRD . . . C 2 20.851 6.47 7.168 1 43.98 ? H12 JRD 401 A 1 HETATM 32 H H14 JRD . . . C 2 20.798 6.256 8.898 1 43.98 ? H14 JRD 401 A 1 HETATM 33 H H11 JRD . . . C 2 23.892 4.407 7.85 1 43.98 ? H11 JRD 401 A 1 HETATM 34 H H20 JRD . . . C 2 26.088 6.933 14.05 1 43.98 ? H20 JRD 401 A 1 HETATM 35 H H19 JRD . . . C 2 24.004 8.21 13.996 1 43.98 ? H19 JRD 401 A 1 HETATM 36 H H18 JRD . . . C 2 22.243 9.939 13.885 1 43.98 ? H18 JRD 401 A 1 HETATM 37 H H17 JRD . . . C 2 22.408 11.764 12.249 1 43.98 ? H17 JRD 401 A 1 HETATM 38 H H16 JRD . . . C 2 24.105 11.643 10.444 1 43.98 ? H16 JRD 401 A 1 HETATM 39 H H15 JRD . . . C 2 25.647 9.751 10.329 1 43.98 ? H15 JRD 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 39 #