data_6MHM
#
_model_server_result.job_id            emVI--evgOG_XtMgH3-pSQ 
_model_server_result.datetime_utc      '2024-10-25 20:25:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mhm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":408}' 
#
_entry.id    6MHM 
#
_exptl.entry_id    6MHM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              145.199 
_entity.id                          7 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'hexylcarbamic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          120.73 
_cell.angle_gamma         90 
_cell.entry_id            6MHM 
_cell.length_a            153.718 
_cell.length_b            68.65 
_cell.length_c            98.386 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MHM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J,K,L,M,N,O,P,AA,BA 1 1 
C,D,G,H,Q,R,S,T,U,V,W,X,Y,Z,CA,DA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 M N N 
? 7 V N N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
3 oligosaccharide 
4 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 3 3 2 NAG NAG C1 O1 . O4 HO4 . sing 
3 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
3 n E NAG 1 E 1 NAG B 401 NAG 
3 n E NAG 2 E 2 NAG B 402 NAG 
3 n E NAG 3 E 3 NAG B 403 NAG 
4 n F NAG 1 F 1 NAG B 404 NAG 
4 n F NAG 2 F 2 NAG B 405 NAG 
3 n G NAG 1 G 1 NAG D 401 NAG 
3 n G NAG 2 G 2 NAG D 402 NAG 
3 n G NAG 3 G 3 NAG D 403 NAG 
4 n H NAG 1 H 1 NAG D 405 NAG 
4 n H NAG 2 H 2 NAG D 406 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 20 A CYS 31 1_555 B SG CYS 198 B CYS 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 B SG CYS 246 B CYS 388 1_555 B SG CYS 250 B CYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 C SG CYS 20 C CYS 31 1_555 D SG CYS 198 D CYS 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 D SG CYS 246 D CYS 388 1_555 D SG CYS 250 D CYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 B SG CYS 1 B CYS 143 1_555 M C07 JRY . B JRY 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? 
covale ? covale2 B ND2 ASN 31 B ASN 173 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale3 B ND2 ASN 117 B ASN 259 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
covale ? covale4 B ND2 ASN 144 B ASN 286 1_555 L C1 NAG . B NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale5 D SG CYS 1 D CYS 143 1_555 V C07 JRY . D JRY 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? 
covale ? covale6 D ND2 ASN 31 D ASN 173 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale7 D ND2 ASN 117 D ASN 259 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale8 D ND2 ASN 144 D ASN 286 1_555 T C1 NAG . D NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale9 D ND2 ASN 200 D ASN 342 1_555 U C1 NAG . D NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? 
covale ? covale10 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale11 E O4 NAG . E NAG 2 1_555 E C1 NAG . E NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? 
covale ? covale12 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
covale ? covale13 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale14 G O4 NAG . G NAG 2 1_555 G C1 NAG . G NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? 
covale ? covale15 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
#
_chem_comp.formula           'C7 H15 N O2' 
_chem_comp.formula_weight    145.199 
_chem_comp.id                JRY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'hexylcarbamic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C07 O15 JRY doub 173 n n 
C07 N08 JRY sing 174 n n 
C09 N08 JRY sing 175 n n 
C09 C10 JRY sing 176 n n 
C10 C11 JRY sing 177 n n 
C11 C12 JRY sing 178 n n 
C12 C13 JRY sing 179 n n 
C13 C14 JRY sing 180 n n 
C07 O1 JRY sing 181 n n 
C09 H1 JRY sing 182 n n 
C10 H2 JRY sing 183 n n 
C11 H3 JRY sing 184 n n 
C11 H4 JRY sing 185 n n 
C12 H5 JRY sing 186 n n 
C12 H6 JRY sing 187 n n 
C13 H7 JRY sing 188 n n 
C13 H8 JRY sing 189 n n 
C14 H9 JRY sing 190 n n 
C14 H10 JRY sing 191 n n 
C14 H11 JRY sing 192 n n 
N08 H12 JRY sing 193 n n 
O1 H13 JRY sing 194 n n 
C09 H14 JRY sing 195 n n 
C10 H15 JRY sing 196 n n 
#
_atom_sites.entry_id                     6MHM 
_atom_sites.fract_transf_matrix[1][1]    0.006505 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003867 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014567 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011824 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 5 SO4 A 1 201 413 SO4 SO4 . 
J 5 SO4 A 1 202 418 SO4 SO4 . 
K 5 SO4 A 1 203 421 SO4 SO4 . 
L 6 NAG B 1 406 406 NAG NAG . 
M 7 JRY B 1 407 1 JRY CAR . 
N 5 SO4 B 1 408 415 SO4 SO4 . 
O 5 SO4 B 1 409 416 SO4 SO4 . 
P 5 SO4 B 1 410 420 SO4 SO4 . 
Q 5 SO4 C 1 201 411 SO4 SO4 . 
R 5 SO4 C 1 202 419 SO4 SO4 . 
S 5 SO4 C 1 203 422 SO4 SO4 . 
T 6 NAG D 1 404 404 NAG NAG . 
U 6 NAG D 1 407 407 NAG NAG . 
V 7 JRY D 1 408 1 JRY CAR . 
W 5 SO4 D 1 409 410 SO4 SO4 . 
X 5 SO4 D 1 410 412 SO4 SO4 . 
Y 5 SO4 D 1 411 414 SO4 SO4 . 
Z 5 SO4 D 1 412 417 SO4 SO4 . 
AA 8 HOH A 1 301 47 HOH HOH . 
AA 8 HOH A 2 302 44 HOH HOH . 
AA 8 HOH A 3 303 64 HOH HOH . 
AA 8 HOH A 4 304 28 HOH HOH . 
AA 8 HOH A 5 305 27 HOH HOH . 
AA 8 HOH A 6 306 63 HOH HOH . 
AA 8 HOH A 7 307 51 HOH HOH . 
AA 8 HOH A 8 308 4 HOH HOH . 
AA 8 HOH A 9 309 70 HOH HOH . 
AA 8 HOH A 10 310 68 HOH HOH . 
AA 8 HOH A 11 311 39 HOH HOH . 
AA 8 HOH A 12 312 69 HOH HOH . 
AA 8 HOH A 13 313 15 HOH HOH . 
BA 8 HOH B 1 501 42 HOH HOH . 
BA 8 HOH B 2 502 23 HOH HOH . 
BA 8 HOH B 3 503 67 HOH HOH . 
BA 8 HOH B 4 504 52 HOH HOH . 
BA 8 HOH B 5 505 73 HOH HOH . 
BA 8 HOH B 6 506 75 HOH HOH . 
BA 8 HOH B 7 507 79 HOH HOH . 
BA 8 HOH B 8 508 20 HOH HOH . 
BA 8 HOH B 9 509 46 HOH HOH . 
BA 8 HOH B 10 510 2 HOH HOH . 
BA 8 HOH B 11 511 35 HOH HOH . 
BA 8 HOH B 12 512 38 HOH HOH . 
BA 8 HOH B 13 513 25 HOH HOH . 
BA 8 HOH B 14 514 61 HOH HOH . 
BA 8 HOH B 15 515 53 HOH HOH . 
BA 8 HOH B 16 516 34 HOH HOH . 
BA 8 HOH B 17 517 30 HOH HOH . 
BA 8 HOH B 18 518 54 HOH HOH . 
BA 8 HOH B 19 519 60 HOH HOH . 
BA 8 HOH B 20 520 18 HOH HOH . 
BA 8 HOH B 21 521 72 HOH HOH . 
BA 8 HOH B 22 522 14 HOH HOH . 
BA 8 HOH B 23 523 77 HOH HOH . 
BA 8 HOH B 24 524 50 HOH HOH . 
BA 8 HOH B 25 525 26 HOH HOH . 
BA 8 HOH B 26 526 55 HOH HOH . 
BA 8 HOH B 27 527 13 HOH HOH . 
BA 8 HOH B 28 528 56 HOH HOH . 
BA 8 HOH B 29 529 66 HOH HOH . 
CA 8 HOH C 1 301 5 HOH HOH . 
CA 8 HOH C 2 302 62 HOH HOH . 
CA 8 HOH C 3 303 45 HOH HOH . 
CA 8 HOH C 4 304 41 HOH HOH . 
CA 8 HOH C 5 305 1 HOH HOH . 
CA 8 HOH C 6 306 19 HOH HOH . 
CA 8 HOH C 7 307 36 HOH HOH . 
CA 8 HOH C 8 308 33 HOH HOH . 
CA 8 HOH C 9 309 49 HOH HOH . 
CA 8 HOH C 10 310 76 HOH HOH . 
CA 8 HOH C 11 311 78 HOH HOH . 
CA 8 HOH C 12 312 7 HOH HOH . 
DA 8 HOH D 1 501 71 HOH HOH . 
DA 8 HOH D 2 502 48 HOH HOH . 
DA 8 HOH D 3 503 65 HOH HOH . 
DA 8 HOH D 4 504 57 HOH HOH . 
DA 8 HOH D 5 505 17 HOH HOH . 
DA 8 HOH D 6 506 16 HOH HOH . 
DA 8 HOH D 7 507 40 HOH HOH . 
DA 8 HOH D 8 508 10 HOH HOH . 
DA 8 HOH D 9 509 3 HOH HOH . 
DA 8 HOH D 10 510 58 HOH HOH . 
DA 8 HOH D 11 511 21 HOH HOH . 
DA 8 HOH D 12 512 43 HOH HOH . 
DA 8 HOH D 13 513 11 HOH HOH . 
DA 8 HOH D 14 514 8 HOH HOH . 
DA 8 HOH D 15 515 29 HOH HOH . 
DA 8 HOH D 16 516 22 HOH HOH . 
DA 8 HOH D 17 517 37 HOH HOH . 
DA 8 HOH D 18 518 32 HOH HOH . 
DA 8 HOH D 19 519 9 HOH HOH . 
DA 8 HOH D 20 520 24 HOH HOH . 
DA 8 HOH D 21 521 74 HOH HOH . 
DA 8 HOH D 22 522 12 HOH HOH . 
DA 8 HOH D 23 523 59 HOH HOH . 
DA 8 HOH D 24 524 6 HOH HOH . 
DA 8 HOH D 25 525 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C07 JRY . . . V 7 34.59 -13.94 28.495 1 48.97 ? C07 JRY 408 D 1 
HETATM 2 C C09 JRY . . . V 7 34.843 -11.8 28.808 1 51.68 ? C09 JRY 408 D 1 
HETATM 3 C C10 JRY . . . V 7 34.922 -10.401 29.374 1 54.49 ? C10 JRY 408 D 1 
HETATM 4 C C11 JRY . . . V 7 35.773 -9.824 30.474 1 58.46 ? C11 JRY 408 D 1 
HETATM 5 C C12 JRY . . . V 7 35.066 -8.496 30.759 1 56.02 ? C12 JRY 408 D 1 
HETATM 6 C C13 JRY . . . V 7 36.048 -7.339 30.881 1 50.8 ? C13 JRY 408 D 1 
HETATM 7 C C14 JRY . . . V 7 35.361 -6.009 31.181 1 47.2 ? C14 JRY 408 D 1 
HETATM 8 N N08 JRY . . . V 7 35.401 -13.031 29.221 1 51.89 ? N08 JRY 408 D 1 
HETATM 9 O O15 JRY . . . V 7 34.898 -15.044 28.699 1 49.92 ? O15 JRY 408 D 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#