data_6MI2 # _model_server_result.job_id E1lIbqRmBr7mgbvrQHFdlA _model_server_result.datetime_utc '2024-10-12 09:21:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mi2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":302}' # _entry.id 6MI2 # _exptl.entry_id 6MI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.99 _cell.angle_gamma 90 _cell.entry_id 6MI2 _cell.length_a 136.903 _cell.length_b 73.338 _cell.length_c 175.121 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,H,I,J,K,L,M,N,O,P,Q,R,S,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,QA 1 1 C,D,E,G,T,U,V,W,X,Y,Z,AA,NA,OA,PA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 J N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N ? 5 P N N ? 5 T N N ? 5 U N N ? 5 V N N ? 5 W N N ? 5 Z N N ? 5 AA N N ? 5 CA N N ? 5 DA N N ? 5 EA N N ? 5 FA N N ? 5 GA N N ? 5 HA N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 FUC _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O6 _pdbx_entity_branch_link.leaving_atom_id_2 HO6 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n G NAG 1 G 1 NAG F 201 NAG 4 n G FUC 2 G 2 FUC F 202 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 143 A CYS 143 1_555 A SG CYS 199 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 87 B CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 B SG CYS 136 B CYS 136 1_555 B SG CYS 195 B CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 C SG CYS 22 D CYS 22 1_555 C SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 C SG CYS 143 D CYS 143 1_555 C SG CYS 199 D CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 D SG CYS 22 E CYS 22 1_555 D SG CYS 87 E CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 D SG CYS 136 E CYS 136 1_555 D SG CYS 195 E CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 E SG CYS 4 F CYS 28 1_555 E SG CYS 13 F CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 E SG CYS 7 F CYS 31 1_555 E SG CYS 21 F CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 E SG CYS 24 F CYS 48 1_555 E SG CYS 38 F CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf12 E SG CYS 41 F CYS 65 1_555 E SG CYS 54 F CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf13 E SG CYS 44 F CYS 68 1_555 E SG CYS 62 F CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf14 E SG CYS 64 F CYS 88 1_555 E SG CYS 78 F CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 E SG CYS 70 F CYS 94 1_555 E SG CYS 75 F CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf16 E SG CYS 82 F CYS 106 1_555 E SG CYS 93 F CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf17 E SG CYS 96 F CYS 120 1_555 E SG CYS 109 F CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf18 E SG CYS 115 F CYS 139 1_555 E SG CYS 134 F CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf19 F SG CYS 4 C CYS 28 1_555 F SG CYS 13 C CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf20 F SG CYS 7 C CYS 31 1_555 F SG CYS 21 C CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf21 F SG CYS 24 C CYS 48 1_555 F SG CYS 38 C CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf22 F SG CYS 41 C CYS 65 1_555 F SG CYS 54 C CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf23 F SG CYS 44 C CYS 68 1_555 F SG CYS 62 C CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf24 F SG CYS 64 C CYS 88 1_555 F SG CYS 78 C CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf25 F SG CYS 70 C CYS 94 1_555 F SG CYS 75 C CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf26 F SG CYS 82 C CYS 106 1_555 F SG CYS 93 C CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf27 F SG CYS 96 C CYS 120 1_555 F SG CYS 109 C CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf28 F SG CYS 115 C CYS 139 1_555 F SG CYS 134 C CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 E ND2 ASN 125 F ASN 149 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? covale ? covale2 F ND2 ASN 125 C ASN 149 1_555 BA C1 NAG . C NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 G O6 NAG . G NAG 1 1_555 G C1 FUC . G FUC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6MI2 _atom_sites.fract_transf_matrix[1][1] 0.007304 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001155 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005781 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 5 SO4 A 1 301 1 SO4 SO4 . I 5 SO4 A 1 302 7 SO4 SO4 . J 5 SO4 A 1 303 17 SO4 SO4 . K 6 GOL A 1 304 21 GOL GOL . L 5 SO4 B 1 301 8 SO4 SO4 . M 5 SO4 B 1 302 10 SO4 SO4 . N 5 SO4 B 1 303 11 SO4 SO4 . O 5 SO4 B 1 304 14 SO4 SO4 . P 5 SO4 B 1 305 20 SO4 SO4 . Q 6 GOL B 1 306 25 GOL GOL . R 6 GOL B 1 307 26 GOL GOL . S 6 GOL B 1 308 27 GOL GOL . T 5 SO4 D 1 301 12 SO4 SO4 . U 5 SO4 D 1 302 18 SO4 SO4 . V 5 SO4 E 1 301 5 SO4 SO4 . W 5 SO4 E 1 302 19 SO4 SO4 . X 6 GOL E 1 303 28 GOL GOL . Y 6 GOL E 1 304 29 GOL GOL . Z 5 SO4 F 1 203 6 SO4 SO4 . AA 5 SO4 F 1 204 9 SO4 SO4 . BA 7 NAG C 1 201 201 NAG NAG . CA 5 SO4 C 1 202 2 SO4 SO4 . DA 5 SO4 C 1 203 3 SO4 SO4 . EA 5 SO4 C 1 204 4 SO4 SO4 . FA 5 SO4 C 1 205 13 SO4 SO4 . GA 5 SO4 C 1 206 15 SO4 SO4 . HA 5 SO4 C 1 207 16 SO4 SO4 . IA 6 GOL C 1 208 22 GOL GOL . JA 6 GOL C 1 209 23 GOL GOL . KA 6 GOL C 1 210 24 GOL GOL . LA 8 HOH A 1 401 48 HOH HOH . LA 8 HOH A 2 402 20 HOH HOH . LA 8 HOH A 3 403 28 HOH HOH . LA 8 HOH A 4 404 40 HOH HOH . LA 8 HOH A 5 405 18 HOH HOH . LA 8 HOH A 6 406 3 HOH HOH . MA 8 HOH B 1 401 1 HOH HOH . MA 8 HOH B 2 402 51 HOH HOH . MA 8 HOH B 3 403 47 HOH HOH . MA 8 HOH B 4 404 22 HOH HOH . MA 8 HOH B 5 405 6 HOH HOH . MA 8 HOH B 6 406 45 HOH HOH . MA 8 HOH B 7 407 49 HOH HOH . MA 8 HOH B 8 408 21 HOH HOH . MA 8 HOH B 9 409 2 HOH HOH . MA 8 HOH B 10 410 46 HOH HOH . MA 8 HOH B 11 411 50 HOH HOH . MA 8 HOH B 12 412 23 HOH HOH . NA 8 HOH D 1 401 12 HOH HOH . NA 8 HOH D 2 402 16 HOH HOH . NA 8 HOH D 3 403 15 HOH HOH . OA 8 HOH E 1 401 38 HOH HOH . OA 8 HOH E 2 402 43 HOH HOH . OA 8 HOH E 3 403 17 HOH HOH . OA 8 HOH E 4 404 37 HOH HOH . OA 8 HOH E 5 405 42 HOH HOH . OA 8 HOH E 6 406 36 HOH HOH . OA 8 HOH E 7 407 29 HOH HOH . OA 8 HOH E 8 408 39 HOH HOH . OA 8 HOH E 9 409 41 HOH HOH . PA 8 HOH F 1 301 8 HOH HOH . PA 8 HOH F 2 302 33 HOH HOH . PA 8 HOH F 3 303 30 HOH HOH . PA 8 HOH F 4 304 34 HOH HOH . PA 8 HOH F 5 305 31 HOH HOH . PA 8 HOH F 6 306 35 HOH HOH . PA 8 HOH F 7 307 27 HOH HOH . PA 8 HOH F 8 308 10 HOH HOH . PA 8 HOH F 9 309 11 HOH HOH . QA 8 HOH C 1 301 13 HOH HOH . QA 8 HOH C 2 302 24 HOH HOH . QA 8 HOH C 3 303 26 HOH HOH . QA 8 HOH C 4 304 4 HOH HOH . QA 8 HOH C 5 305 25 HOH HOH . QA 8 HOH C 6 306 19 HOH HOH . QA 8 HOH C 7 307 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . M 5 -26.617 2.468 -32.322 1 152.11 ? S SO4 302 B 1 HETATM 2 O O1 SO4 . . . M 5 -27.875 3.167 -32.075 1 152.2 ? O1 SO4 302 B 1 HETATM 3 O O2 SO4 . . . M 5 -26.358 2.426 -33.758 1 149.69 ? O2 SO4 302 B 1 HETATM 4 O O3 SO4 . . . M 5 -26.709 1.106 -31.804 1 151.62 ? O3 SO4 302 B 1 HETATM 5 O O4 SO4 . . . M 5 -25.529 3.172 -31.651 1 151.52 ? O4 SO4 302 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #