data_6MJM
#
_model_server_result.job_id            pWnW7sMS7eyV7R28LlX5nQ 
_model_server_result.datetime_utc      '2024-11-23 18:40:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mjm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":604}' 
#
_entry.id    6MJM 
#
_exptl.entry_id    6MJM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MJM 
_cell.length_a            75.67 
_cell.length_b            100.69 
_cell.length_c            136.02 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MJM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 420 A CYS 441 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 F O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6MJM 
_atom_sites.fract_transf_matrix[1][1]    0.013215 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009931 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007352 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 500 HEM HEM . 
C 3 GOL A 1 602 501 GOL GOL . 
D 3 GOL A 1 603 502 GOL GOL . 
E 3 GOL A 1 604 503 GOL GOL . 
F 4 HOH A 1 701 628 HOH HOH . 
F 4 HOH A 2 702 623 HOH HOH . 
F 4 HOH A 3 703 637 HOH HOH . 
F 4 HOH A 4 704 646 HOH HOH . 
F 4 HOH A 5 705 619 HOH HOH . 
F 4 HOH A 6 706 634 HOH HOH . 
F 4 HOH A 7 707 640 HOH HOH . 
F 4 HOH A 8 708 617 HOH HOH . 
F 4 HOH A 9 709 605 HOH HOH . 
F 4 HOH A 10 710 620 HOH HOH . 
F 4 HOH A 11 711 611 HOH HOH . 
F 4 HOH A 12 712 649 HOH HOH . 
F 4 HOH A 13 713 603 HOH HOH . 
F 4 HOH A 14 714 629 HOH HOH . 
F 4 HOH A 15 715 615 HOH HOH . 
F 4 HOH A 16 716 614 HOH HOH . 
F 4 HOH A 17 717 604 HOH HOH . 
F 4 HOH A 18 718 631 HOH HOH . 
F 4 HOH A 19 719 625 HOH HOH . 
F 4 HOH A 20 720 639 HOH HOH . 
F 4 HOH A 21 721 624 HOH HOH . 
F 4 HOH A 22 722 602 HOH HOH . 
F 4 HOH A 23 723 607 HOH HOH . 
F 4 HOH A 24 724 632 HOH HOH . 
F 4 HOH A 25 725 616 HOH HOH . 
F 4 HOH A 26 726 641 HOH HOH . 
F 4 HOH A 27 727 633 HOH HOH . 
F 4 HOH A 28 728 630 HOH HOH . 
F 4 HOH A 29 729 600 HOH HOH . 
F 4 HOH A 30 730 609 HOH HOH . 
F 4 HOH A 31 731 613 HOH HOH . 
F 4 HOH A 32 732 636 HOH HOH . 
F 4 HOH A 33 733 612 HOH HOH . 
F 4 HOH A 34 734 635 HOH HOH . 
F 4 HOH A 35 735 622 HOH HOH . 
F 4 HOH A 36 736 618 HOH HOH . 
F 4 HOH A 37 737 606 HOH HOH . 
F 4 HOH A 38 738 610 HOH HOH . 
F 4 HOH A 39 739 626 HOH HOH . 
F 4 HOH A 40 740 643 HOH HOH . 
F 4 HOH A 41 741 638 HOH HOH . 
F 4 HOH A 42 742 601 HOH HOH . 
F 4 HOH A 43 743 647 HOH HOH . 
F 4 HOH A 44 744 627 HOH HOH . 
F 4 HOH A 45 745 608 HOH HOH . 
F 4 HOH A 46 746 644 HOH HOH . 
F 4 HOH A 47 747 642 HOH HOH . 
F 4 HOH A 48 748 645 HOH HOH . 
F 4 HOH A 49 749 648 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 19.279 18.972 10.924 1 73.33 ? C1 GOL 604 A 1 
HETATM 2 O O1 GOL . . . E 3 19.347 17.618 10.583 1 72.34 ? O1 GOL 604 A 1 
HETATM 3 C C2 GOL . . . E 3 18.474 19.069 12.258 1 71.22 ? C2 GOL 604 A 1 
HETATM 4 O O2 GOL . . . E 3 18.992 18.246 13.224 1 68.17 ? O2 GOL 604 A 1 
HETATM 5 C C3 GOL . . . E 3 18.554 20.556 12.688 1 70.12 ? C3 GOL 604 A 1 
HETATM 6 O O3 GOL . . . E 3 17.34 20.877 13.29 1 68.94 ? O3 GOL 604 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#