data_6MJP # _model_server_result.job_id Jz9s2uXj4laKMyaTbJnO1Q _model_server_result.datetime_utc '2024-11-21 14:19:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mjp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":402}' # _entry.id 6MJP # _exptl.entry_id 6MJP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 346.459 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-cyclohexylhexyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.18 _cell.angle_gamma 90 _cell.entry_id 6MJP _cell.length_a 167.354 _cell.length_b 80.729 _cell.length_c 202.992 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id T _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 112 A GLU 112 1_555 H CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc2 A OD1 ASP 116 A ASP 116 1_555 H CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc3 A OD2 ASP 116 A ASP 116 1_555 H CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? metalc ? metalc4 A OD1 ASN 196 A ASN 196 1_555 I CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc5 H CA CA . A CA 303 1_555 Y O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc6 I CA CA . A CA 304 1_555 B OD1 ASN 196 B ASN 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc7 I CA CA . A CA 304 1_555 Z O HOH . B HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? # _chem_comp.formula 'C18 H34 O6' _chem_comp.formula_weight 346.459 _chem_comp.id JU7 _chem_comp.mon_nstd_flag . _chem_comp.name '6-cyclohexylhexyl beta-D-glucopyranoside' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C19 JU7 sing 208 n n C19 C18 JU7 sing 209 n n C18 O17 JU7 sing 210 n n C18 C21 JU7 sing 211 n n O17 C03 JU7 sing 212 n n O22 C21 JU7 sing 213 n n C21 C23 JU7 sing 214 n n O04 C03 JU7 sing 215 n n O04 C05 JU7 sing 216 n n C03 C02 JU7 sing 217 n n C08 C07 JU7 sing 218 n n C08 C09 JU7 sing 219 n n C05 C06 JU7 sing 220 n n C10 C09 JU7 sing 221 n n C10 C11 JU7 sing 222 n n C06 C07 JU7 sing 223 n n C16 C11 JU7 sing 224 n n C16 C15 JU7 sing 225 n n C02 C23 JU7 sing 226 n n C02 O01 JU7 sing 227 n n C23 O24 JU7 sing 228 n n C11 C12 JU7 sing 229 n n C15 C14 JU7 sing 230 n n C12 C13 JU7 sing 231 n n C14 C13 JU7 sing 232 n n C02 H1 JU7 sing 233 n n C03 H2 JU7 sing 234 n n C05 H3 JU7 sing 235 n n C05 H4 JU7 sing 236 n n C06 H5 JU7 sing 237 n n C06 H6 JU7 sing 238 n n C07 H7 JU7 sing 239 n n C07 H8 JU7 sing 240 n n C08 H9 JU7 sing 241 n n C08 H10 JU7 sing 242 n n C09 H11 JU7 sing 243 n n C09 H12 JU7 sing 244 n n C10 H13 JU7 sing 245 n n C10 H14 JU7 sing 246 n n C11 H15 JU7 sing 247 n n C12 H16 JU7 sing 248 n n C12 H17 JU7 sing 249 n n C13 H18 JU7 sing 250 n n C13 H19 JU7 sing 251 n n C14 H20 JU7 sing 252 n n C14 H21 JU7 sing 253 n n C15 H22 JU7 sing 254 n n C15 H23 JU7 sing 255 n n C16 H24 JU7 sing 256 n n C16 H25 JU7 sing 257 n n C18 H26 JU7 sing 258 n n C19 H27 JU7 sing 259 n n C19 H28 JU7 sing 260 n n C21 H29 JU7 sing 261 n n C23 H30 JU7 sing 262 n n O01 H31 JU7 sing 263 n n O20 H32 JU7 sing 264 n n O22 H33 JU7 sing 265 n n O24 H34 JU7 sing 266 n n # _atom_sites.entry_id 6MJP _atom_sites.fract_transf_matrix[1][1] 0.005975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002436 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 CL A 1 301 2 CL CL . G 5 CL A 1 302 3 CL CL . H 6 CA A 1 303 4 CA CA . I 6 CA A 1 304 5 CA CA . J 5 CL A 1 305 6 CL CL . K 7 AE3 A 1 306 4 AE3 AE3 . L 7 AE3 A 1 307 8 AE3 AE3 . M 8 PG4 A 1 308 10 PG4 PG4 . N 5 CL B 1 301 1 CL CL . O 8 PG4 B 1 302 7 PG4 PG4 . P 9 PEG B 1 303 9 PEG PEG . Q 10 GOL B 1 304 12 GOL GOL . R 10 GOL B 1 305 13 GOL GOL . S 11 LMT F 1 401 1 LMT LMT . T 12 JU7 F 1 402 3 JU7 CG6 . U 11 LMT F 1 403 11 LMT LMT . V 13 MA4 G 1 401 2 MA4 CY6 . W 11 LMT G 1 402 5 LMT LMT . X 10 GOL G 1 403 14 GOL GOL . Y 14 HOH A 1 401 6 HOH HOH . Y 14 HOH A 2 402 10 HOH HOH . Y 14 HOH A 3 403 1 HOH HOH . Y 14 HOH A 4 404 33 HOH HOH . Y 14 HOH A 5 405 41 HOH HOH . Y 14 HOH A 6 406 24 HOH HOH . Y 14 HOH A 7 407 27 HOH HOH . Y 14 HOH A 8 408 51 HOH HOH . Y 14 HOH A 9 409 21 HOH HOH . Y 14 HOH A 10 410 35 HOH HOH . Y 14 HOH A 11 411 28 HOH HOH . Y 14 HOH A 12 412 55 HOH HOH . Y 14 HOH A 13 413 5 HOH HOH . Y 14 HOH A 14 414 44 HOH HOH . Y 14 HOH A 15 415 26 HOH HOH . Y 14 HOH A 16 416 31 HOH HOH . Y 14 HOH A 17 417 16 HOH HOH . Y 14 HOH A 18 418 34 HOH HOH . Y 14 HOH A 19 419 36 HOH HOH . Y 14 HOH A 20 420 17 HOH HOH . Y 14 HOH A 21 421 11 HOH HOH . Y 14 HOH A 22 422 22 HOH HOH . Y 14 HOH A 23 423 45 HOH HOH . Y 14 HOH A 24 424 18 HOH HOH . Y 14 HOH A 25 425 54 HOH HOH . Y 14 HOH A 26 426 25 HOH HOH . Y 14 HOH A 27 427 20 HOH HOH . Z 14 HOH B 1 401 37 HOH HOH . Z 14 HOH B 2 402 8 HOH HOH . Z 14 HOH B 3 403 19 HOH HOH . Z 14 HOH B 4 404 23 HOH HOH . Z 14 HOH B 5 405 29 HOH HOH . Z 14 HOH B 6 406 32 HOH HOH . Z 14 HOH B 7 407 46 HOH HOH . Z 14 HOH B 8 408 15 HOH HOH . Z 14 HOH B 9 409 3 HOH HOH . Z 14 HOH B 10 410 50 HOH HOH . Z 14 HOH B 11 411 39 HOH HOH . Z 14 HOH B 12 412 48 HOH HOH . Z 14 HOH B 13 413 47 HOH HOH . Z 14 HOH B 14 414 4 HOH HOH . Z 14 HOH B 15 415 38 HOH HOH . Z 14 HOH B 16 416 30 HOH HOH . Z 14 HOH B 17 417 42 HOH HOH . Z 14 HOH B 18 418 40 HOH HOH . AA 14 HOH C 1 201 14 HOH HOH . AA 14 HOH C 2 202 13 HOH HOH . BA 14 HOH F 1 501 12 HOH HOH . CA 14 HOH G 1 501 52 HOH HOH . CA 14 HOH G 2 502 43 HOH HOH . CA 14 HOH G 3 503 2 HOH HOH . CA 14 HOH G 4 504 53 HOH HOH . CA 14 HOH G 5 505 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 JU7 . . . T 12 32.269 -10.546 42.581 1 118.03 ? C02 JU7 402 F 1 HETATM 2 C C03 JU7 . . . T 12 33.248 -10.896 41.413 1 117.85 ? C03 JU7 402 F 1 HETATM 3 C C05 JU7 . . . T 12 35.638 -10.623 41.436 1 92.09 ? C05 JU7 402 F 1 HETATM 4 C C06 JU7 . . . T 12 36.662 -9.561 41.899 1 81.1 ? C06 JU7 402 F 1 HETATM 5 C C07 JU7 . . . T 12 38.044 -10.158 42.227 1 84.67 ? C07 JU7 402 F 1 HETATM 6 C C08 JU7 . . . T 12 39.252 -9.514 41.484 1 95.05 ? C08 JU7 402 F 1 HETATM 7 C C09 JU7 . . . T 12 40.55 -9.371 42.361 1 97.2 ? C09 JU7 402 F 1 HETATM 8 C C10 JU7 . . . T 12 41.528 -8.254 41.88 1 96.48 ? C10 JU7 402 F 1 HETATM 9 C C11 JU7 . . . T 12 42.71 -7.907 42.838 1 100.9 ? C11 JU7 402 F 1 HETATM 10 C C12 JU7 . . . T 12 42.21 -7.427 44.198 1 106.95 ? C12 JU7 402 F 1 HETATM 11 C C13 JU7 . . . T 12 43.331 -6.909 45.116 1 110.33 ? C13 JU7 402 F 1 HETATM 12 C C14 JU7 . . . T 12 44.127 -5.782 44.477 1 109.41 ? C14 JU7 402 F 1 HETATM 13 C C15 JU7 . . . T 12 44.659 -6.265 43.14 1 110.3 ? C15 JU7 402 F 1 HETATM 14 C C16 JU7 . . . T 12 43.526 -6.762 42.235 1 105.43 ? C16 JU7 402 F 1 HETATM 15 C C18 JU7 . . . T 12 31.527 -11.624 39.984 1 130.06 ? C18 JU7 402 F 1 HETATM 16 C C19 JU7 . . . T 12 30.676 -11.107 38.816 1 138.88 ? C19 JU7 402 F 1 HETATM 17 C C21 JU7 . . . T 12 30.514 -11.795 41.164 1 126.83 ? C21 JU7 402 F 1 HETATM 18 C C23 JU7 . . . T 12 31.161 -11.637 42.588 1 126.09 ? C23 JU7 402 F 1 HETATM 19 O O01 JU7 . . . T 12 32.967 -10.661 43.777 1 116.34 ? O01 JU7 402 F 1 HETATM 20 O O04 JU7 . . . T 12 34.349 -10.004 41.362 1 105.82 ? O04 JU7 402 F 1 HETATM 21 O O17 JU7 . . . T 12 32.505 -10.637 40.239 1 123.96 ? O17 JU7 402 F 1 HETATM 22 O O20 JU7 . . . T 12 31.505 -11.033 37.706 1 147.32 ? O20 JU7 402 F 1 HETATM 23 O O22 JU7 . . . T 12 30.007 -13.109 41.078 1 125.78 ? O22 JU7 402 F 1 HETATM 24 O O24 JU7 . . . T 12 30.201 -11.172 43.493 1 129.25 ? O24 JU7 402 F 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 24 #