data_6MKH # _model_server_result.job_id dYuydy3rDek8_vVgcf3gAQ _model_server_result.datetime_utc '2024-10-11 03:16:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mkh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 6MKH # _exptl.entry_id 6MKH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.3 _cell.angle_gamma 90 _cell.entry_id 6MKH _cell.length_a 123.842 _cell.length_b 85.401 _cell.length_c 84.572 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MKH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 392 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 424 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id IM2 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id IM2 _struct_conn.ptnr2_auth_seq_id 701 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.373 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 286 n n P O2 PO4 sing 287 n n P O3 PO4 sing 288 n n P O4 PO4 sing 289 n n # _atom_sites.entry_id 6MKH _atom_sites.fract_transf_matrix[1][1] 0.008075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002986 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012607 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IM2 A 1 701 1 IM2 IM2 . C 3 PO4 A 1 702 1 PO4 PO4 . D 3 PO4 A 1 703 2 PO4 PO4 . E 4 HOH A 1 801 18 HOH HOH . E 4 HOH A 2 802 60 HOH HOH . E 4 HOH A 3 803 22 HOH HOH . E 4 HOH A 4 804 51 HOH HOH . E 4 HOH A 5 805 24 HOH HOH . E 4 HOH A 6 806 55 HOH HOH . E 4 HOH A 7 807 1 HOH HOH . E 4 HOH A 8 808 20 HOH HOH . E 4 HOH A 9 809 4 HOH HOH . E 4 HOH A 10 810 23 HOH HOH . E 4 HOH A 11 811 8 HOH HOH . E 4 HOH A 12 812 52 HOH HOH . E 4 HOH A 13 813 10 HOH HOH . E 4 HOH A 14 814 61 HOH HOH . E 4 HOH A 15 815 57 HOH HOH . E 4 HOH A 16 816 17 HOH HOH . E 4 HOH A 17 817 46 HOH HOH . E 4 HOH A 18 818 9 HOH HOH . E 4 HOH A 19 819 28 HOH HOH . E 4 HOH A 20 820 7 HOH HOH . E 4 HOH A 21 821 72 HOH HOH . E 4 HOH A 22 822 50 HOH HOH . E 4 HOH A 23 823 42 HOH HOH . E 4 HOH A 24 824 56 HOH HOH . E 4 HOH A 25 825 13 HOH HOH . E 4 HOH A 26 826 30 HOH HOH . E 4 HOH A 27 827 49 HOH HOH . E 4 HOH A 28 828 5 HOH HOH . E 4 HOH A 29 829 6 HOH HOH . E 4 HOH A 30 830 43 HOH HOH . E 4 HOH A 31 831 47 HOH HOH . E 4 HOH A 32 832 45 HOH HOH . E 4 HOH A 33 833 41 HOH HOH . E 4 HOH A 34 834 19 HOH HOH . E 4 HOH A 35 835 15 HOH HOH . E 4 HOH A 36 836 40 HOH HOH . E 4 HOH A 37 837 16 HOH HOH . E 4 HOH A 38 838 39 HOH HOH . E 4 HOH A 39 839 26 HOH HOH . E 4 HOH A 40 840 44 HOH HOH . E 4 HOH A 41 841 29 HOH HOH . E 4 HOH A 42 842 2 HOH HOH . E 4 HOH A 43 843 21 HOH HOH . E 4 HOH A 44 844 12 HOH HOH . E 4 HOH A 45 845 59 HOH HOH . E 4 HOH A 46 846 3 HOH HOH . E 4 HOH A 47 847 33 HOH HOH . E 4 HOH A 48 848 25 HOH HOH . E 4 HOH A 49 849 11 HOH HOH . E 4 HOH A 50 850 34 HOH HOH . E 4 HOH A 51 851 71 HOH HOH . E 4 HOH A 52 852 85 HOH HOH . E 4 HOH A 53 853 78 HOH HOH . E 4 HOH A 54 854 53 HOH HOH . E 4 HOH A 55 855 79 HOH HOH . E 4 HOH A 56 856 58 HOH HOH . E 4 HOH A 57 857 69 HOH HOH . E 4 HOH A 58 858 66 HOH HOH . E 4 HOH A 59 859 70 HOH HOH . E 4 HOH A 60 860 77 HOH HOH . E 4 HOH A 61 861 35 HOH HOH . E 4 HOH A 62 862 82 HOH HOH . E 4 HOH A 63 863 54 HOH HOH . E 4 HOH A 64 864 48 HOH HOH . E 4 HOH A 65 865 73 HOH HOH . E 4 HOH A 66 866 36 HOH HOH . E 4 HOH A 67 867 63 HOH HOH . E 4 HOH A 68 868 65 HOH HOH . E 4 HOH A 69 869 68 HOH HOH . E 4 HOH A 70 870 74 HOH HOH . E 4 HOH A 71 871 80 HOH HOH . E 4 HOH A 72 872 76 HOH HOH . E 4 HOH A 73 873 31 HOH HOH . E 4 HOH A 74 874 81 HOH HOH . E 4 HOH A 75 875 27 HOH HOH . E 4 HOH A 76 876 83 HOH HOH . E 4 HOH A 77 877 67 HOH HOH . E 4 HOH A 78 878 84 HOH HOH . E 4 HOH A 79 879 37 HOH HOH . E 4 HOH A 80 880 75 HOH HOH . E 4 HOH A 81 881 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 45.332 12.125 -14.413 0.7 108.05 ? P PO4 703 A 1 HETATM 2 O O1 PO4 . . . D 3 45.132 11.154 -15.553 0.7 79.69 ? O1 PO4 703 A 1 HETATM 3 O O2 PO4 . . . D 3 43.987 12.488 -13.83 0.7 81.4 ? O2 PO4 703 A 1 HETATM 4 O O3 PO4 . . . D 3 46.013 13.374 -14.921 0.7 72.68 ? O3 PO4 703 A 1 HETATM 5 O O4 PO4 . . . D 3 46.184 11.483 -13.342 0.7 74.31 ? O4 PO4 703 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #