data_6MKI # _model_server_result.job_id HG8IgybSGu7xAnvtx7zcZg _model_server_result.datetime_utc '2024-11-25 22:24:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mki # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 6MKI # _exptl.entry_id 6MKI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 607.729 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Ceftaroline,bound form' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.93 _cell.angle_gamma 90 _cell.entry_id 6MKI _cell.length_a 123.496 _cell.length_b 85.572 _cell.length_c 82.715 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MKI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 392 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 424 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C6 _struct_conn.ptnr2_label_comp_id AI8 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id AI8 _struct_conn.ptnr2_auth_seq_id 701 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.106 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H23 N8 O5 S4 1' _chem_comp.formula_weight 607.729 _chem_comp.id AI8 _chem_comp.mon_nstd_flag . _chem_comp.name 'Ceftaroline, bound form' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C18 AI8 sing 1 n n S4 C18 AI8 sing 2 n y S4 N7 AI8 sing 3 n y C18 N6 AI8 doub 4 n y N7 C14 AI8 doub 5 n y N6 C14 AI8 sing 6 n y O3 C6 AI8 doub 7 n n C14 C12 AI8 sing 8 n n C6 C5 AI8 sing 9 n n C12 N4 AI8 doub 10 z n C12 C11 AI8 sing 11 n n O4 C10 AI8 doub 12 n n N3 C11 AI8 sing 13 n n N3 C5 AI8 sing 14 n n O7 N4 AI8 sing 15 n n O7 C21 AI8 sing 16 n n C11 O6 AI8 doub 17 n n C10 O5 AI8 sing 18 n n C10 C7 AI8 sing 19 n n C5 C4 AI8 sing 20 n n N2 C7 AI8 sing 21 n n N2 C4 AI8 sing 22 n n C7 C9 AI8 doub 23 n n C24 C21 AI8 sing 24 n n C9 S2 AI8 sing 25 n n C9 C8 AI8 sing 26 n n S2 C13 AI8 sing 27 n n C8 S1 AI8 sing 28 n n C4 S1 AI8 sing 29 n n C13 N5 AI8 doub 30 n y C13 S3 AI8 sing 31 n y N5 C15 AI8 sing 32 n y C19 C22 AI8 doub 33 n y C19 C17 AI8 sing 34 n y S3 C16 AI8 sing 35 n y C22 N9 AI8 sing 36 n y C15 C17 AI8 sing 37 n n C15 C16 AI8 doub 38 n y C17 C20 AI8 doub 39 n y N9 C25 AI8 sing 40 n n N9 C23 AI8 doub 41 n y C20 C23 AI8 sing 42 n y N2 HN2 AI8 sing 43 n n N3 HN3 AI8 sing 44 n n C4 H4 AI8 sing 45 n n C5 H5 AI8 sing 46 n n C6 H6 AI8 sing 47 n n C8 H18 AI8 sing 48 n n C8 H28 AI8 sing 49 n n N8 H1N8 AI8 sing 50 n n N8 H2N8 AI8 sing 51 n n C16 H16 AI8 sing 52 n n C19 H19 AI8 sing 53 n n C20 H20 AI8 sing 54 n n C21 H121 AI8 sing 55 n n C21 H221 AI8 sing 56 n n C22 H22 AI8 sing 57 n n C23 H23 AI8 sing 58 n n C24 H124 AI8 sing 59 n n C24 H224 AI8 sing 60 n n C24 H324 AI8 sing 61 n n C25 H125 AI8 sing 62 n n C25 H225 AI8 sing 63 n n C25 H325 AI8 sing 64 n n O5 HO5 AI8 sing 65 n n # _atom_sites.entry_id 6MKI _atom_sites.fract_transf_matrix[1][1] 0.008097 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002937 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01286 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AI8 A 1 701 1 AI8 AI8 . C 3 PO4 A 1 702 1 PO4 PO4 . D 3 PO4 A 1 703 2 PO4 PO4 . E 4 GOL A 1 704 1 GOL GOL . F 5 HOH A 1 801 25 HOH HOH . F 5 HOH A 2 802 26 HOH HOH . F 5 HOH A 3 803 22 HOH HOH . F 5 HOH A 4 804 6 HOH HOH . F 5 HOH A 5 805 7 HOH HOH . F 5 HOH A 6 806 20 HOH HOH . F 5 HOH A 7 807 16 HOH HOH . F 5 HOH A 8 808 4 HOH HOH . F 5 HOH A 9 809 13 HOH HOH . F 5 HOH A 10 810 1 HOH HOH . F 5 HOH A 11 811 19 HOH HOH . F 5 HOH A 12 812 18 HOH HOH . F 5 HOH A 13 813 12 HOH HOH . F 5 HOH A 14 814 11 HOH HOH . F 5 HOH A 15 815 14 HOH HOH . F 5 HOH A 16 816 10 HOH HOH . F 5 HOH A 17 817 21 HOH HOH . F 5 HOH A 18 818 24 HOH HOH . F 5 HOH A 19 819 17 HOH HOH . F 5 HOH A 20 820 5 HOH HOH . F 5 HOH A 21 821 9 HOH HOH . F 5 HOH A 22 822 23 HOH HOH . F 5 HOH A 23 823 8 HOH HOH . F 5 HOH A 24 824 15 HOH HOH . F 5 HOH A 25 825 3 HOH HOH . F 5 HOH A 26 826 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 AI8 . . . B 2 36.76 -0.467 9.345 0.92 81.51 ? S1 AI8 701 A 1 HETATM 2 N N2 AI8 . . . B 2 37.243 1.771 7.835 0.92 61.79 ? N2 AI8 701 A 1 HETATM 3 S S2 AI8 . . . B 2 33.543 2.315 10.166 0.92 89.42 ? S2 AI8 701 A 1 HETATM 4 N N3 AI8 . . . B 2 39.056 0.939 10.407 0.92 64.29 ? N3 AI8 701 A 1 HETATM 5 O O3 AI8 . . . B 2 39.543 2.738 8.754 0.92 77.65 ? O3 AI8 701 A 1 HETATM 6 S S3 AI8 . . . B 2 32.399 0.936 7.594 0.92 96.52 ? S3 AI8 701 A 1 HETATM 7 C C4 AI8 . . . B 2 37.71 0.293 8.371 0.92 72.36 ? C4 AI8 701 A 1 HETATM 8 N N4 AI8 . . . B 2 38.189 0.844 13.603 0.92 82.8 ? N4 AI8 701 A 1 HETATM 9 O O4 AI8 . . . B 2 35.092 4.336 7.657 0.92 65.79 ? O4 AI8 701 A 1 HETATM 10 S S4 AI8 . . . B 2 42.426 1.808 14.748 0.92 108.47 ? S4 AI8 701 A 1 HETATM 11 C C5 AI8 . . . B 2 39.119 0.497 9.051 0.92 69.39 ? C5 AI8 701 A 1 HETATM 12 N N5 AI8 . . . B 2 31.01 1.804 9.348 0.92 110.98 ? N5 AI8 701 A 1 HETATM 13 O O5 AI8 . . . B 2 34.539 2.859 6.151 0.92 82.6 ? O5 AI8 701 A 1 HETATM 14 C C6 AI8 . . . B 2 39.773 1.648 8.339 0.92 77.58 ? C6 AI8 701 A 1 HETATM 15 N N6 AI8 . . . B 2 41.542 2.103 12.586 0.92 85.73 ? N6 AI8 701 A 1 HETATM 16 O O6 AI8 . . . B 2 39.513 -1.081 11.405 0.92 79.22 ? O6 AI8 701 A 1 HETATM 17 C C7 AI8 . . . B 2 35.751 2.051 8.08 0.92 77.93 ? C7 AI8 701 A 1 HETATM 18 N N7 AI8 . . . B 2 41.111 1.086 14.728 0.92 87.02 ? N7 AI8 701 A 1 HETATM 19 O O7 AI8 . . . B 2 36.947 0.373 13.153 0.92 97.23 ? O7 AI8 701 A 1 HETATM 20 C C8 AI8 . . . B 2 35.522 0.428 10.192 0.92 91.14 ? C8 AI8 701 A 1 HETATM 21 N N8 AI8 . . . B 2 43.829 3.193 13.049 0.92 62.48 ? N8 AI8 701 A 1 HETATM 22 C C9 AI8 . . . B 2 35.161 1.666 9.67 0.92 90.35 ? C9 AI8 701 A 1 HETATM 23 N N9 AI8 . . . B 2 25.853 1.013 8.24 0.92 130.31 ? N9 AI8 701 A 1 HETATM 24 C C10 AI8 . . . B 2 35.084 3.145 7.249 0.92 71.05 ? C10 AI8 701 A 1 HETATM 25 C C11 AI8 . . . B 2 39.277 0.071 11.547 0.92 66.8 ? C11 AI8 701 A 1 HETATM 26 C C12 AI8 . . . B 2 39.234 0.711 12.929 0.92 65.74 ? C12 AI8 701 A 1 HETATM 27 C C13 AI8 . . . B 2 32.365 1.649 8.96 0.92 93.15 ? C13 AI8 701 A 1 HETATM 28 C C14 AI8 . . . B 2 40.56 1.252 13.448 0.92 78.31 ? C14 AI8 701 A 1 HETATM 29 C C15 AI8 . . . B 2 30.111 1.19 8.226 0.92 102.33 ? C15 AI8 701 A 1 HETATM 30 C C16 AI8 . . . B 2 30.964 0.676 7.186 0.92 101.52 ? C16 AI8 701 A 1 HETATM 31 C C17 AI8 . . . B 2 28.586 1.137 8.225 0.92 102.44 ? C17 AI8 701 A 1 HETATM 32 C C18 AI8 . . . B 2 42.641 2.424 13.365 0.92 68.42 ? C18 AI8 701 A 1 HETATM 33 C C19 AI8 . . . B 2 27.865 2.041 7.517 0.92 98.3 ? C19 AI8 701 A 1 HETATM 34 C C20 AI8 . . . B 2 27.958 0.172 8.938 0.92 110.51 ? C20 AI8 701 A 1 HETATM 35 C C21 AI8 . . . B 2 35.927 1.153 13.715 0.92 85.9 ? C21 AI8 701 A 1 HETATM 36 C C22 AI8 . . . B 2 26.48 1.977 7.526 0.92 110.96 ? C22 AI8 701 A 1 HETATM 37 C C23 AI8 . . . B 2 26.573 0.111 8.945 0.92 120.49 ? C23 AI8 701 A 1 HETATM 38 C C24 AI8 . . . B 2 34.636 0.341 13.776 0.92 89.68 ? C24 AI8 701 A 1 HETATM 39 C C25 AI8 . . . B 2 24.401 1.021 8.191 0.92 100.4 ? C25 AI8 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 39 #