data_6MLG # _model_server_result.job_id Z3p5j342_eLjzy60BbOMDA _model_server_result.datetime_utc '2024-11-16 14:35:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mlg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6MLG # _exptl.entry_id 6MLG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.209 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARGININE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MLG _cell.length_a 37.207 _cell.length_b 57.656 _cell.length_c 101.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MLG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 38 E CYS 38 1_555 A SG CYS 45 E CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 F NA NA . E NA 305 1_555 G O HOH . E HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc2 F NA NA . E NA 305 1_555 G O HOH . E HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.181 ? metalc ? metalc3 F NA NA . E NA 305 1_555 G O HOH . E HOH 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? # _chem_comp.formula 'C6 H15 N4 O2 1' _chem_comp.formula_weight 175.209 _chem_comp.id ARG _chem_comp.mon_nstd_flag y _chem_comp.name ARGININE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ARG sing 19 n n N H ARG sing 20 n n N H2 ARG sing 21 n n CA C ARG sing 22 n n CA CB ARG sing 23 n n CA HA ARG sing 24 n n C O ARG doub 25 n n C OXT ARG sing 26 n n CB CG ARG sing 27 n n CB HB2 ARG sing 28 n n CB HB3 ARG sing 29 n n CG CD ARG sing 30 n n CG HG2 ARG sing 31 n n CG HG3 ARG sing 32 n n CD NE ARG sing 33 n n CD HD2 ARG sing 34 n n CD HD3 ARG sing 35 n n NE CZ ARG sing 36 n n NE HE ARG sing 37 n n CZ NH1 ARG sing 38 n n CZ NH2 ARG doub 39 n n NH1 HH11 ARG sing 40 n n NH1 HH12 ARG sing 41 n n NH2 HH21 ARG sing 42 n n NH2 HH22 ARG sing 43 n n OXT HXT ARG sing 44 n n # _atom_sites.entry_id 6MLG _atom_sites.fract_transf_matrix[1][1] 0.026877 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017344 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009876 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ARG E 1 301 1 ARG ARG . C 3 ACT E 1 302 1 ACT ACT . D 3 ACT E 1 303 2 ACT ACT . E 3 ACT E 1 304 3 ACT ACT . F 4 NA E 1 305 1 NA NA . G 5 HOH E 1 401 66 HOH HOH . G 5 HOH E 2 402 45 HOH HOH . G 5 HOH E 3 403 18 HOH HOH . G 5 HOH E 4 404 64 HOH HOH . G 5 HOH E 5 405 228 HOH HOH . G 5 HOH E 6 406 149 HOH HOH . G 5 HOH E 7 407 31 HOH HOH . G 5 HOH E 8 408 3 HOH HOH . G 5 HOH E 9 409 203 HOH HOH . G 5 HOH E 10 410 178 HOH HOH . G 5 HOH E 11 411 119 HOH HOH . G 5 HOH E 12 412 24 HOH HOH . G 5 HOH E 13 413 181 HOH HOH . G 5 HOH E 14 414 46 HOH HOH . G 5 HOH E 15 415 102 HOH HOH . G 5 HOH E 16 416 4 HOH HOH . G 5 HOH E 17 417 75 HOH HOH . G 5 HOH E 18 418 157 HOH HOH . G 5 HOH E 19 419 20 HOH HOH . G 5 HOH E 20 420 28 HOH HOH . G 5 HOH E 21 421 29 HOH HOH . G 5 HOH E 22 422 74 HOH HOH . G 5 HOH E 23 423 151 HOH HOH . G 5 HOH E 24 424 224 HOH HOH . G 5 HOH E 25 425 39 HOH HOH . G 5 HOH E 26 426 26 HOH HOH . G 5 HOH E 27 427 168 HOH HOH . G 5 HOH E 28 428 164 HOH HOH . G 5 HOH E 29 429 63 HOH HOH . G 5 HOH E 30 430 50 HOH HOH . G 5 HOH E 31 431 14 HOH HOH . G 5 HOH E 32 432 68 HOH HOH . G 5 HOH E 33 433 101 HOH HOH . G 5 HOH E 34 434 34 HOH HOH . G 5 HOH E 35 435 33 HOH HOH . G 5 HOH E 36 436 17 HOH HOH . G 5 HOH E 37 437 13 HOH HOH . G 5 HOH E 38 438 16 HOH HOH . G 5 HOH E 39 439 96 HOH HOH . G 5 HOH E 40 440 5 HOH HOH . G 5 HOH E 41 441 115 HOH HOH . G 5 HOH E 42 442 2 HOH HOH . G 5 HOH E 43 443 120 HOH HOH . G 5 HOH E 44 444 134 HOH HOH . G 5 HOH E 45 445 131 HOH HOH . G 5 HOH E 46 446 132 HOH HOH . G 5 HOH E 47 447 32 HOH HOH . G 5 HOH E 48 448 153 HOH HOH . G 5 HOH E 49 449 15 HOH HOH . G 5 HOH E 50 450 41 HOH HOH . G 5 HOH E 51 451 21 HOH HOH . G 5 HOH E 52 452 12 HOH HOH . G 5 HOH E 53 453 81 HOH HOH . G 5 HOH E 54 454 70 HOH HOH . G 5 HOH E 55 455 110 HOH HOH . G 5 HOH E 56 456 76 HOH HOH . G 5 HOH E 57 457 27 HOH HOH . G 5 HOH E 58 458 107 HOH HOH . G 5 HOH E 59 459 1 HOH HOH . G 5 HOH E 60 460 97 HOH HOH . G 5 HOH E 61 461 51 HOH HOH . G 5 HOH E 62 462 146 HOH HOH . G 5 HOH E 63 463 114 HOH HOH . G 5 HOH E 64 464 138 HOH HOH . G 5 HOH E 65 465 159 HOH HOH . G 5 HOH E 66 466 48 HOH HOH . G 5 HOH E 67 467 127 HOH HOH . G 5 HOH E 68 468 136 HOH HOH . G 5 HOH E 69 469 59 HOH HOH . G 5 HOH E 70 470 7 HOH HOH . G 5 HOH E 71 471 54 HOH HOH . G 5 HOH E 72 472 148 HOH HOH . G 5 HOH E 73 473 71 HOH HOH . G 5 HOH E 74 474 37 HOH HOH . G 5 HOH E 75 475 10 HOH HOH . G 5 HOH E 76 476 25 HOH HOH . G 5 HOH E 77 477 77 HOH HOH . G 5 HOH E 78 478 42 HOH HOH . G 5 HOH E 79 479 217 HOH HOH . G 5 HOH E 80 480 87 HOH HOH . G 5 HOH E 81 481 162 HOH HOH . G 5 HOH E 82 482 206 HOH HOH . G 5 HOH E 83 483 143 HOH HOH . G 5 HOH E 84 484 23 HOH HOH . G 5 HOH E 85 485 6 HOH HOH . G 5 HOH E 86 486 238 HOH HOH . G 5 HOH E 87 487 179 HOH HOH . G 5 HOH E 88 488 19 HOH HOH . G 5 HOH E 89 489 121 HOH HOH . G 5 HOH E 90 490 53 HOH HOH . G 5 HOH E 91 491 104 HOH HOH . G 5 HOH E 92 492 30 HOH HOH . G 5 HOH E 93 493 36 HOH HOH . G 5 HOH E 94 494 208 HOH HOH . G 5 HOH E 95 495 89 HOH HOH . G 5 HOH E 96 496 229 HOH HOH . G 5 HOH E 97 497 11 HOH HOH . G 5 HOH E 98 498 80 HOH HOH . G 5 HOH E 99 499 112 HOH HOH . G 5 HOH E 100 500 141 HOH HOH . G 5 HOH E 101 501 129 HOH HOH . G 5 HOH E 102 502 84 HOH HOH . G 5 HOH E 103 503 92 HOH HOH . G 5 HOH E 104 504 69 HOH HOH . G 5 HOH E 105 505 180 HOH HOH . G 5 HOH E 106 506 60 HOH HOH . G 5 HOH E 107 507 147 HOH HOH . G 5 HOH E 108 508 182 HOH HOH . G 5 HOH E 109 509 49 HOH HOH . G 5 HOH E 110 510 38 HOH HOH . G 5 HOH E 111 511 44 HOH HOH . G 5 HOH E 112 512 78 HOH HOH . G 5 HOH E 113 513 73 HOH HOH . G 5 HOH E 114 514 126 HOH HOH . G 5 HOH E 115 515 200 HOH HOH . G 5 HOH E 116 516 22 HOH HOH . G 5 HOH E 117 517 90 HOH HOH . G 5 HOH E 118 518 201 HOH HOH . G 5 HOH E 119 519 170 HOH HOH . G 5 HOH E 120 520 222 HOH HOH . G 5 HOH E 121 521 8 HOH HOH . G 5 HOH E 122 522 105 HOH HOH . G 5 HOH E 123 523 234 HOH HOH . G 5 HOH E 124 524 169 HOH HOH . G 5 HOH E 125 525 99 HOH HOH . G 5 HOH E 126 526 62 HOH HOH . G 5 HOH E 127 527 189 HOH HOH . G 5 HOH E 128 528 58 HOH HOH . G 5 HOH E 129 529 57 HOH HOH . G 5 HOH E 130 530 171 HOH HOH . G 5 HOH E 131 531 199 HOH HOH . G 5 HOH E 132 532 137 HOH HOH . G 5 HOH E 133 533 9 HOH HOH . G 5 HOH E 134 534 79 HOH HOH . G 5 HOH E 135 535 211 HOH HOH . G 5 HOH E 136 536 56 HOH HOH . G 5 HOH E 137 537 161 HOH HOH . G 5 HOH E 138 538 47 HOH HOH . G 5 HOH E 139 539 184 HOH HOH . G 5 HOH E 140 540 188 HOH HOH . G 5 HOH E 141 541 72 HOH HOH . G 5 HOH E 142 542 91 HOH HOH . G 5 HOH E 143 543 83 HOH HOH . G 5 HOH E 144 544 113 HOH HOH . G 5 HOH E 145 545 67 HOH HOH . G 5 HOH E 146 546 204 HOH HOH . G 5 HOH E 147 547 108 HOH HOH . G 5 HOH E 148 548 94 HOH HOH . G 5 HOH E 149 549 239 HOH HOH . G 5 HOH E 150 550 156 HOH HOH . G 5 HOH E 151 551 196 HOH HOH . G 5 HOH E 152 552 197 HOH HOH . G 5 HOH E 153 553 93 HOH HOH . G 5 HOH E 154 554 185 HOH HOH . G 5 HOH E 155 555 35 HOH HOH . G 5 HOH E 156 556 173 HOH HOH . G 5 HOH E 157 557 55 HOH HOH . G 5 HOH E 158 558 219 HOH HOH . G 5 HOH E 159 559 65 HOH HOH . G 5 HOH E 160 560 175 HOH HOH . G 5 HOH E 161 561 191 HOH HOH . G 5 HOH E 162 562 209 HOH HOH . G 5 HOH E 163 563 176 HOH HOH . G 5 HOH E 164 564 155 HOH HOH . G 5 HOH E 165 565 233 HOH HOH . G 5 HOH E 166 566 212 HOH HOH . G 5 HOH E 167 567 236 HOH HOH . G 5 HOH E 168 568 227 HOH HOH . G 5 HOH E 169 569 100 HOH HOH . G 5 HOH E 170 570 202 HOH HOH . G 5 HOH E 171 571 128 HOH HOH . G 5 HOH E 172 572 61 HOH HOH . G 5 HOH E 173 573 154 HOH HOH . G 5 HOH E 174 574 232 HOH HOH . G 5 HOH E 175 575 210 HOH HOH . G 5 HOH E 176 576 145 HOH HOH . G 5 HOH E 177 577 139 HOH HOH . G 5 HOH E 178 578 207 HOH HOH . G 5 HOH E 179 579 144 HOH HOH . G 5 HOH E 180 580 195 HOH HOH . G 5 HOH E 181 581 118 HOH HOH . G 5 HOH E 182 582 85 HOH HOH . G 5 HOH E 183 583 205 HOH HOH . G 5 HOH E 184 584 172 HOH HOH . G 5 HOH E 185 585 40 HOH HOH . G 5 HOH E 186 586 223 HOH HOH . G 5 HOH E 187 587 130 HOH HOH . G 5 HOH E 188 588 98 HOH HOH . G 5 HOH E 189 589 122 HOH HOH . G 5 HOH E 190 590 95 HOH HOH . G 5 HOH E 191 591 109 HOH HOH . G 5 HOH E 192 592 117 HOH HOH . G 5 HOH E 193 593 192 HOH HOH . G 5 HOH E 194 594 237 HOH HOH . G 5 HOH E 195 595 116 HOH HOH . G 5 HOH E 196 596 86 HOH HOH . G 5 HOH E 197 597 82 HOH HOH . G 5 HOH E 198 598 103 HOH HOH . G 5 HOH E 199 599 240 HOH HOH . G 5 HOH E 200 600 193 HOH HOH . G 5 HOH E 201 601 225 HOH HOH . G 5 HOH E 202 602 167 HOH HOH . G 5 HOH E 203 603 230 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ARG . . . B 2 -14.03 1.314 12.046 1 14.19 ? N ARG 301 E 1 HETATM 2 C CA ARG . . . B 2 -13.871 1.985 10.76 1 11.09 ? CA ARG 301 E 1 HETATM 3 C C ARG . . . B 2 -14.49 1.123 9.657 1 13.27 ? C ARG 301 E 1 HETATM 4 O O ARG . . . B 2 -14.622 1.56 8.506 1 10.83 ? O ARG 301 E 1 HETATM 5 C CB ARG . . . B 2 -12.381 2.281 10.457 1 7.84 ? CB ARG 301 E 1 HETATM 6 C CG ARG . . . B 2 -11.436 1.082 10.594 1 12.38 ? CG ARG 301 E 1 HETATM 7 C CD ARG . . . B 2 -10.002 1.391 10.115 1 16.86 ? CD ARG 301 E 1 HETATM 8 N NE ARG . . . B 2 -9.069 0.297 10.416 1 13.12 ? NE ARG 301 E 1 HETATM 9 C CZ ARG . . . B 2 -7.791 0.251 10.035 1 12.26 ? CZ ARG 301 E 1 HETATM 10 N NH1 ARG . . . B 2 -7.034 -0.795 10.358 1 10.87 ? NH1 ARG 301 E 1 HETATM 11 N NH2 ARG . . . B 2 -7.262 1.233 9.315 1 8.99 ? NH2 ARG 301 E 1 HETATM 12 O OXT ARG . . . B 2 -14.896 -0.021 9.911 1 10.09 ? OXT ARG 301 E 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 12 #