data_6MLL # _model_server_result.job_id iVcAAI10nw7AAaeEghJypw _model_server_result.datetime_utc '2024-10-10 09:32:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mll # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6MLL # _exptl.entry_id 6MLL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MLL _cell.length_a 57.112 _cell.length_b 58.445 _cell.length_c 74.563 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MLL _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 65 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 69 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 234 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 238 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6MLL _atom_sites.fract_transf_matrix[1][1] 0.017509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01711 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013411 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 N1G A 1 301 1 N1G N1G . C 3 GOL A 1 302 1 GOL GOL . D 4 HOH A 1 401 102 HOH HOH . D 4 HOH A 2 402 90 HOH HOH . D 4 HOH A 3 403 93 HOH HOH . D 4 HOH A 4 404 63 HOH HOH . D 4 HOH A 5 405 83 HOH HOH . D 4 HOH A 6 406 17 HOH HOH . D 4 HOH A 7 407 70 HOH HOH . D 4 HOH A 8 408 107 HOH HOH . D 4 HOH A 9 409 41 HOH HOH . D 4 HOH A 10 410 2 HOH HOH . D 4 HOH A 11 411 12 HOH HOH . D 4 HOH A 12 412 94 HOH HOH . D 4 HOH A 13 413 58 HOH HOH . D 4 HOH A 14 414 36 HOH HOH . D 4 HOH A 15 415 26 HOH HOH . D 4 HOH A 16 416 7 HOH HOH . D 4 HOH A 17 417 9 HOH HOH . D 4 HOH A 18 418 31 HOH HOH . D 4 HOH A 19 419 82 HOH HOH . D 4 HOH A 20 420 32 HOH HOH . D 4 HOH A 21 421 45 HOH HOH . D 4 HOH A 22 422 104 HOH HOH . D 4 HOH A 23 423 6 HOH HOH . D 4 HOH A 24 424 69 HOH HOH . D 4 HOH A 25 425 5 HOH HOH . D 4 HOH A 26 426 23 HOH HOH . D 4 HOH A 27 427 8 HOH HOH . D 4 HOH A 28 428 91 HOH HOH . D 4 HOH A 29 429 10 HOH HOH . D 4 HOH A 30 430 1 HOH HOH . D 4 HOH A 31 431 49 HOH HOH . D 4 HOH A 32 432 13 HOH HOH . D 4 HOH A 33 433 38 HOH HOH . D 4 HOH A 34 434 53 HOH HOH . D 4 HOH A 35 435 39 HOH HOH . D 4 HOH A 36 436 19 HOH HOH . D 4 HOH A 37 437 44 HOH HOH . D 4 HOH A 38 438 3 HOH HOH . D 4 HOH A 39 439 61 HOH HOH . D 4 HOH A 40 440 106 HOH HOH . D 4 HOH A 41 441 65 HOH HOH . D 4 HOH A 42 442 25 HOH HOH . D 4 HOH A 43 443 103 HOH HOH . D 4 HOH A 44 444 55 HOH HOH . D 4 HOH A 45 445 37 HOH HOH . D 4 HOH A 46 446 34 HOH HOH . D 4 HOH A 47 447 110 HOH HOH . D 4 HOH A 48 448 88 HOH HOH . D 4 HOH A 49 449 87 HOH HOH . D 4 HOH A 50 450 57 HOH HOH . D 4 HOH A 51 451 105 HOH HOH . D 4 HOH A 52 452 42 HOH HOH . D 4 HOH A 53 453 35 HOH HOH . D 4 HOH A 54 454 54 HOH HOH . D 4 HOH A 55 455 15 HOH HOH . D 4 HOH A 56 456 21 HOH HOH . D 4 HOH A 57 457 48 HOH HOH . D 4 HOH A 58 458 75 HOH HOH . D 4 HOH A 59 459 4 HOH HOH . D 4 HOH A 60 460 59 HOH HOH . D 4 HOH A 61 461 114 HOH HOH . D 4 HOH A 62 462 43 HOH HOH . D 4 HOH A 63 463 56 HOH HOH . D 4 HOH A 64 464 86 HOH HOH . D 4 HOH A 65 465 20 HOH HOH . D 4 HOH A 66 466 27 HOH HOH . D 4 HOH A 67 467 119 HOH HOH . D 4 HOH A 68 468 74 HOH HOH . D 4 HOH A 69 469 28 HOH HOH . D 4 HOH A 70 470 72 HOH HOH . D 4 HOH A 71 471 85 HOH HOH . D 4 HOH A 72 472 18 HOH HOH . D 4 HOH A 73 473 67 HOH HOH . D 4 HOH A 74 474 77 HOH HOH . D 4 HOH A 75 475 113 HOH HOH . D 4 HOH A 76 476 24 HOH HOH . D 4 HOH A 77 477 84 HOH HOH . D 4 HOH A 78 478 80 HOH HOH . D 4 HOH A 79 479 46 HOH HOH . D 4 HOH A 80 480 118 HOH HOH . D 4 HOH A 81 481 22 HOH HOH . D 4 HOH A 82 482 115 HOH HOH . D 4 HOH A 83 483 99 HOH HOH . D 4 HOH A 84 484 78 HOH HOH . D 4 HOH A 85 485 108 HOH HOH . D 4 HOH A 86 486 52 HOH HOH . D 4 HOH A 87 487 73 HOH HOH . D 4 HOH A 88 488 101 HOH HOH . D 4 HOH A 89 489 79 HOH HOH . D 4 HOH A 90 490 64 HOH HOH . D 4 HOH A 91 491 117 HOH HOH . D 4 HOH A 92 492 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 10.32 27.695 29.614 1 38.52 ? C1 GOL 302 A 1 HETATM 2 O O1 GOL . . . C 3 10.047 28.083 28.304 1 40.58 ? O1 GOL 302 A 1 HETATM 3 C C2 GOL . . . C 3 11.487 26.687 29.529 1 37.72 ? C2 GOL 302 A 1 HETATM 4 O O2 GOL . . . C 3 12.647 27.287 29.083 1 36.39 ? O2 GOL 302 A 1 HETATM 5 C C3 GOL . . . C 3 11.642 26.127 30.954 1 39.93 ? C3 GOL 302 A 1 HETATM 6 O O3 GOL . . . C 3 13.004 26.171 31.239 1 41.69 ? O3 GOL 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #