data_6MNE # _model_server_result.job_id 7MmI2lf-n_NGJLKSE2stvw _model_server_result.datetime_utc '2024-11-21 17:47:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 6MNE # _exptl.entry_id 6MNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.366 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MNE _cell.length_a 43.78 _cell.length_b 108.24 _cell.length_c 117.67 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C18 H22 O2' _chem_comp.formula_weight 270.366 _chem_comp.id J3Z _chem_comp.mon_nstd_flag . _chem_comp.name (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Estrone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C9 J3Z sing 186 n n C8 C7 J3Z sing 187 n n O1 C7 J3Z doub 188 n n C9 C10 J3Z sing 189 n n C7 C5 J3Z sing 190 n n C6 C5 J3Z sing 191 n n C5 C10 J3Z sing 192 n n C5 C4 J3Z sing 193 n n C10 C12 J3Z sing 194 n n C14 C12 J3Z sing 195 n n C14 C15 J3Z sing 196 n n C12 C2 J3Z sing 197 n n C4 C3 J3Z sing 198 n n C15 C16 J3Z sing 199 n n C2 C3 J3Z sing 200 n n C2 C21 J3Z sing 201 n n C16 C21 J3Z doub 202 n y C16 C17 J3Z sing 203 n y C21 C20 J3Z sing 204 n y C17 C18 J3Z doub 205 n y C20 C19 J3Z doub 206 n y C18 C19 J3Z sing 207 n y C18 O3 J3Z sing 208 n n C2 H2 J3Z sing 209 n n C4 H14 J3Z sing 210 n n C4 H24 J3Z sing 211 n n C6 H16 J3Z sing 212 n n C6 H26 J3Z sing 213 n n C6 H36 J3Z sing 214 n n O3 HO3 J3Z sing 215 n n C8 H18 J3Z sing 216 n n C8 H28 J3Z sing 217 n n C9 H19 J3Z sing 218 n n C9 H29 J3Z sing 219 n n C10 H10 J3Z sing 220 n n C12 H12 J3Z sing 221 n n C3 H13 J3Z sing 222 n n C3 H23 J3Z sing 223 n n C14 H114 J3Z sing 224 n n C14 H214 J3Z sing 225 n n C15 H115 J3Z sing 226 n n C15 H215 J3Z sing 227 n n C17 H17 J3Z sing 228 n n C19 H19A J3Z sing 229 n n C20 H20 J3Z sing 230 n n # _atom_sites.entry_id 6MNE _atom_sites.fract_transf_matrix[1][1] 0.022841 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008498 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 401 2 NAP NAP . D 3 J3Z A 1 402 2 J3Z J3Z . E 4 GOL A 1 403 1 GOL GOL . F 2 NAP B 1 401 1 NAP NAP . G 3 J3Z B 1 402 1 J3Z J3Z . H 5 HOH A 1 501 17 HOH HOH . H 5 HOH A 2 502 10 HOH HOH . H 5 HOH A 3 503 9 HOH HOH . H 5 HOH A 4 504 124 HOH HOH . H 5 HOH A 5 505 69 HOH HOH . H 5 HOH A 6 506 55 HOH HOH . H 5 HOH A 7 507 94 HOH HOH . H 5 HOH A 8 508 129 HOH HOH . H 5 HOH A 9 509 39 HOH HOH . H 5 HOH A 10 510 110 HOH HOH . H 5 HOH A 11 511 33 HOH HOH . H 5 HOH A 12 512 7 HOH HOH . H 5 HOH A 13 513 72 HOH HOH . H 5 HOH A 14 514 114 HOH HOH . H 5 HOH A 15 515 76 HOH HOH . H 5 HOH A 16 516 101 HOH HOH . H 5 HOH A 17 517 113 HOH HOH . H 5 HOH A 18 518 24 HOH HOH . H 5 HOH A 19 519 13 HOH HOH . H 5 HOH A 20 520 42 HOH HOH . H 5 HOH A 21 521 5 HOH HOH . H 5 HOH A 22 522 116 HOH HOH . H 5 HOH A 23 523 20 HOH HOH . H 5 HOH A 24 524 79 HOH HOH . H 5 HOH A 25 525 81 HOH HOH . H 5 HOH A 26 526 32 HOH HOH . H 5 HOH A 27 527 23 HOH HOH . H 5 HOH A 28 528 100 HOH HOH . H 5 HOH A 29 529 1 HOH HOH . H 5 HOH A 30 530 11 HOH HOH . H 5 HOH A 31 531 53 HOH HOH . H 5 HOH A 32 532 62 HOH HOH . H 5 HOH A 33 533 8 HOH HOH . H 5 HOH A 34 534 25 HOH HOH . H 5 HOH A 35 535 15 HOH HOH . H 5 HOH A 36 536 127 HOH HOH . H 5 HOH A 37 537 34 HOH HOH . H 5 HOH A 38 538 78 HOH HOH . H 5 HOH A 39 539 47 HOH HOH . H 5 HOH A 40 540 22 HOH HOH . H 5 HOH A 41 541 30 HOH HOH . H 5 HOH A 42 542 57 HOH HOH . H 5 HOH A 43 543 99 HOH HOH . H 5 HOH A 44 544 82 HOH HOH . H 5 HOH A 45 545 12 HOH HOH . H 5 HOH A 46 546 102 HOH HOH . H 5 HOH A 47 547 128 HOH HOH . H 5 HOH A 48 548 29 HOH HOH . H 5 HOH A 49 549 50 HOH HOH . H 5 HOH A 50 550 135 HOH HOH . H 5 HOH A 51 551 68 HOH HOH . H 5 HOH A 52 552 87 HOH HOH . H 5 HOH A 53 553 105 HOH HOH . H 5 HOH A 54 554 134 HOH HOH . H 5 HOH A 55 555 108 HOH HOH . H 5 HOH A 56 556 48 HOH HOH . H 5 HOH A 57 557 64 HOH HOH . H 5 HOH A 58 558 21 HOH HOH . H 5 HOH A 59 559 89 HOH HOH . H 5 HOH A 60 560 104 HOH HOH . H 5 HOH A 61 561 28 HOH HOH . H 5 HOH A 62 562 61 HOH HOH . H 5 HOH A 63 563 115 HOH HOH . H 5 HOH A 64 564 18 HOH HOH . H 5 HOH A 65 565 70 HOH HOH . H 5 HOH A 66 566 14 HOH HOH . H 5 HOH A 67 567 75 HOH HOH . H 5 HOH A 68 568 73 HOH HOH . H 5 HOH A 69 569 74 HOH HOH . H 5 HOH A 70 570 109 HOH HOH . I 5 HOH B 1 501 65 HOH HOH . I 5 HOH B 2 502 67 HOH HOH . I 5 HOH B 3 503 59 HOH HOH . I 5 HOH B 4 504 49 HOH HOH . I 5 HOH B 5 505 77 HOH HOH . I 5 HOH B 6 506 119 HOH HOH . I 5 HOH B 7 507 43 HOH HOH . I 5 HOH B 8 508 36 HOH HOH . I 5 HOH B 9 509 85 HOH HOH . I 5 HOH B 10 510 19 HOH HOH . I 5 HOH B 11 511 118 HOH HOH . I 5 HOH B 12 512 83 HOH HOH . I 5 HOH B 13 513 66 HOH HOH . I 5 HOH B 14 514 80 HOH HOH . I 5 HOH B 15 515 54 HOH HOH . I 5 HOH B 16 516 45 HOH HOH . I 5 HOH B 17 517 103 HOH HOH . I 5 HOH B 18 518 35 HOH HOH . I 5 HOH B 19 519 92 HOH HOH . I 5 HOH B 20 520 122 HOH HOH . I 5 HOH B 21 521 2 HOH HOH . I 5 HOH B 22 522 121 HOH HOH . I 5 HOH B 23 523 132 HOH HOH . I 5 HOH B 24 524 56 HOH HOH . I 5 HOH B 25 525 46 HOH HOH . I 5 HOH B 26 526 84 HOH HOH . I 5 HOH B 27 527 133 HOH HOH . I 5 HOH B 28 528 130 HOH HOH . I 5 HOH B 29 529 71 HOH HOH . I 5 HOH B 30 530 131 HOH HOH . I 5 HOH B 31 531 4 HOH HOH . I 5 HOH B 32 532 3 HOH HOH . I 5 HOH B 33 533 27 HOH HOH . I 5 HOH B 34 534 88 HOH HOH . I 5 HOH B 35 535 51 HOH HOH . I 5 HOH B 36 536 37 HOH HOH . I 5 HOH B 37 537 44 HOH HOH . I 5 HOH B 38 538 58 HOH HOH . I 5 HOH B 39 539 26 HOH HOH . I 5 HOH B 40 540 125 HOH HOH . I 5 HOH B 41 541 86 HOH HOH . I 5 HOH B 42 542 63 HOH HOH . I 5 HOH B 43 543 41 HOH HOH . I 5 HOH B 44 544 52 HOH HOH . I 5 HOH B 45 545 40 HOH HOH . I 5 HOH B 46 546 31 HOH HOH . I 5 HOH B 47 547 117 HOH HOH . I 5 HOH B 48 548 60 HOH HOH . I 5 HOH B 49 549 106 HOH HOH . I 5 HOH B 50 550 38 HOH HOH . I 5 HOH B 51 551 126 HOH HOH . I 5 HOH B 52 552 93 HOH HOH . I 5 HOH B 53 553 90 HOH HOH . I 5 HOH B 54 554 91 HOH HOH . I 5 HOH B 55 555 111 HOH HOH . I 5 HOH B 56 556 123 HOH HOH . I 5 HOH B 57 557 112 HOH HOH . I 5 HOH B 58 558 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 J3Z . . . D 3 -2.293 4.332 -3.623 1 63.76 ? C2 J3Z 402 A 1 HETATM 2 C C4 J3Z . . . D 3 -3.31 2.513 -5.176 1 59.69 ? C4 J3Z 402 A 1 HETATM 3 C C5 J3Z . . . D 3 -4.097 1.948 -3.989 1 59.75 ? C5 J3Z 402 A 1 HETATM 4 C C6 J3Z . . . D 3 -3.389 0.714 -3.404 1 59.38 ? C6 J3Z 402 A 1 HETATM 5 O O1 J3Z . . . D 3 -5.917 0.954 -5.249 1 53.06 ? O1 J3Z 402 A 1 HETATM 6 O O3 J3Z . . . D 3 2.33 7 -1.544 1 78.57 ? O3 J3Z 402 A 1 HETATM 7 C C7 J3Z . . . D 3 -5.531 1.534 -4.246 1 58.24 ? C7 J3Z 402 A 1 HETATM 8 C C8 J3Z . . . D 3 -6.438 1.908 -3.089 1 58.82 ? C8 J3Z 402 A 1 HETATM 9 C C9 J3Z . . . D 3 -5.488 2.609 -2.113 1 59.28 ? C9 J3Z 402 A 1 HETATM 10 C C10 J3Z . . . D 3 -4.375 3.111 -3.033 1 60.44 ? C10 J3Z 402 A 1 HETATM 11 C C12 J3Z . . . D 3 -3.096 3.727 -2.456 1 61.74 ? C12 J3Z 402 A 1 HETATM 12 C C3 J3Z . . . D 3 -2.043 3.258 -4.709 1 61.59 ? C3 J3Z 402 A 1 HETATM 13 C C14 J3Z . . . D 3 -3.371 4.776 -1.386 1 62.08 ? C14 J3Z 402 A 1 HETATM 14 C C15 J3Z . . . D 3 -2.066 5.211 -0.731 1 62.66 ? C15 J3Z 402 A 1 HETATM 15 C C16 J3Z . . . D 3 -0.955 5.448 -1.699 1 66.72 ? C16 J3Z 402 A 1 HETATM 16 C C21 J3Z . . . D 3 -1.046 5.017 -3.127 1 68.29 ? C21 J3Z 402 A 1 HETATM 17 C C17 J3Z . . . D 3 0.169 6.1 -1.205 1 70.51 ? C17 J3Z 402 A 1 HETATM 18 C C18 J3Z . . . D 3 1.237 6.365 -2.052 1 75.74 ? C18 J3Z 402 A 1 HETATM 19 C C19 J3Z . . . D 3 1.182 5.982 -3.403 1 76.01 ? C19 J3Z 402 A 1 HETATM 20 C C20 J3Z . . . D 3 0.06 5.325 -3.939 1 73.02 ? C20 J3Z 402 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #