data_6MNE
#
_model_server_result.job_id            fwIkgq8F8DecNepsQOkF2Q 
_model_server_result.datetime_utc      '2024-10-19 20:21:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mne 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":403}' 
#
_entry.id    6MNE 
#
_exptl.entry_id    6MNE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MNE 
_cell.length_a            43.78 
_cell.length_b            108.24 
_cell.length_c            117.67 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MNE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6MNE 
_atom_sites.fract_transf_matrix[1][1]    0.022841 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009239 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008498 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 401 2 NAP NAP . 
D 3 J3Z A 1 402 2 J3Z J3Z . 
E 4 GOL A 1 403 1 GOL GOL . 
F 2 NAP B 1 401 1 NAP NAP . 
G 3 J3Z B 1 402 1 J3Z J3Z . 
H 5 HOH A 1 501 17 HOH HOH . 
H 5 HOH A 2 502 10 HOH HOH . 
H 5 HOH A 3 503 9 HOH HOH . 
H 5 HOH A 4 504 124 HOH HOH . 
H 5 HOH A 5 505 69 HOH HOH . 
H 5 HOH A 6 506 55 HOH HOH . 
H 5 HOH A 7 507 94 HOH HOH . 
H 5 HOH A 8 508 129 HOH HOH . 
H 5 HOH A 9 509 39 HOH HOH . 
H 5 HOH A 10 510 110 HOH HOH . 
H 5 HOH A 11 511 33 HOH HOH . 
H 5 HOH A 12 512 7 HOH HOH . 
H 5 HOH A 13 513 72 HOH HOH . 
H 5 HOH A 14 514 114 HOH HOH . 
H 5 HOH A 15 515 76 HOH HOH . 
H 5 HOH A 16 516 101 HOH HOH . 
H 5 HOH A 17 517 113 HOH HOH . 
H 5 HOH A 18 518 24 HOH HOH . 
H 5 HOH A 19 519 13 HOH HOH . 
H 5 HOH A 20 520 42 HOH HOH . 
H 5 HOH A 21 521 5 HOH HOH . 
H 5 HOH A 22 522 116 HOH HOH . 
H 5 HOH A 23 523 20 HOH HOH . 
H 5 HOH A 24 524 79 HOH HOH . 
H 5 HOH A 25 525 81 HOH HOH . 
H 5 HOH A 26 526 32 HOH HOH . 
H 5 HOH A 27 527 23 HOH HOH . 
H 5 HOH A 28 528 100 HOH HOH . 
H 5 HOH A 29 529 1 HOH HOH . 
H 5 HOH A 30 530 11 HOH HOH . 
H 5 HOH A 31 531 53 HOH HOH . 
H 5 HOH A 32 532 62 HOH HOH . 
H 5 HOH A 33 533 8 HOH HOH . 
H 5 HOH A 34 534 25 HOH HOH . 
H 5 HOH A 35 535 15 HOH HOH . 
H 5 HOH A 36 536 127 HOH HOH . 
H 5 HOH A 37 537 34 HOH HOH . 
H 5 HOH A 38 538 78 HOH HOH . 
H 5 HOH A 39 539 47 HOH HOH . 
H 5 HOH A 40 540 22 HOH HOH . 
H 5 HOH A 41 541 30 HOH HOH . 
H 5 HOH A 42 542 57 HOH HOH . 
H 5 HOH A 43 543 99 HOH HOH . 
H 5 HOH A 44 544 82 HOH HOH . 
H 5 HOH A 45 545 12 HOH HOH . 
H 5 HOH A 46 546 102 HOH HOH . 
H 5 HOH A 47 547 128 HOH HOH . 
H 5 HOH A 48 548 29 HOH HOH . 
H 5 HOH A 49 549 50 HOH HOH . 
H 5 HOH A 50 550 135 HOH HOH . 
H 5 HOH A 51 551 68 HOH HOH . 
H 5 HOH A 52 552 87 HOH HOH . 
H 5 HOH A 53 553 105 HOH HOH . 
H 5 HOH A 54 554 134 HOH HOH . 
H 5 HOH A 55 555 108 HOH HOH . 
H 5 HOH A 56 556 48 HOH HOH . 
H 5 HOH A 57 557 64 HOH HOH . 
H 5 HOH A 58 558 21 HOH HOH . 
H 5 HOH A 59 559 89 HOH HOH . 
H 5 HOH A 60 560 104 HOH HOH . 
H 5 HOH A 61 561 28 HOH HOH . 
H 5 HOH A 62 562 61 HOH HOH . 
H 5 HOH A 63 563 115 HOH HOH . 
H 5 HOH A 64 564 18 HOH HOH . 
H 5 HOH A 65 565 70 HOH HOH . 
H 5 HOH A 66 566 14 HOH HOH . 
H 5 HOH A 67 567 75 HOH HOH . 
H 5 HOH A 68 568 73 HOH HOH . 
H 5 HOH A 69 569 74 HOH HOH . 
H 5 HOH A 70 570 109 HOH HOH . 
I 5 HOH B 1 501 65 HOH HOH . 
I 5 HOH B 2 502 67 HOH HOH . 
I 5 HOH B 3 503 59 HOH HOH . 
I 5 HOH B 4 504 49 HOH HOH . 
I 5 HOH B 5 505 77 HOH HOH . 
I 5 HOH B 6 506 119 HOH HOH . 
I 5 HOH B 7 507 43 HOH HOH . 
I 5 HOH B 8 508 36 HOH HOH . 
I 5 HOH B 9 509 85 HOH HOH . 
I 5 HOH B 10 510 19 HOH HOH . 
I 5 HOH B 11 511 118 HOH HOH . 
I 5 HOH B 12 512 83 HOH HOH . 
I 5 HOH B 13 513 66 HOH HOH . 
I 5 HOH B 14 514 80 HOH HOH . 
I 5 HOH B 15 515 54 HOH HOH . 
I 5 HOH B 16 516 45 HOH HOH . 
I 5 HOH B 17 517 103 HOH HOH . 
I 5 HOH B 18 518 35 HOH HOH . 
I 5 HOH B 19 519 92 HOH HOH . 
I 5 HOH B 20 520 122 HOH HOH . 
I 5 HOH B 21 521 2 HOH HOH . 
I 5 HOH B 22 522 121 HOH HOH . 
I 5 HOH B 23 523 132 HOH HOH . 
I 5 HOH B 24 524 56 HOH HOH . 
I 5 HOH B 25 525 46 HOH HOH . 
I 5 HOH B 26 526 84 HOH HOH . 
I 5 HOH B 27 527 133 HOH HOH . 
I 5 HOH B 28 528 130 HOH HOH . 
I 5 HOH B 29 529 71 HOH HOH . 
I 5 HOH B 30 530 131 HOH HOH . 
I 5 HOH B 31 531 4 HOH HOH . 
I 5 HOH B 32 532 3 HOH HOH . 
I 5 HOH B 33 533 27 HOH HOH . 
I 5 HOH B 34 534 88 HOH HOH . 
I 5 HOH B 35 535 51 HOH HOH . 
I 5 HOH B 36 536 37 HOH HOH . 
I 5 HOH B 37 537 44 HOH HOH . 
I 5 HOH B 38 538 58 HOH HOH . 
I 5 HOH B 39 539 26 HOH HOH . 
I 5 HOH B 40 540 125 HOH HOH . 
I 5 HOH B 41 541 86 HOH HOH . 
I 5 HOH B 42 542 63 HOH HOH . 
I 5 HOH B 43 543 41 HOH HOH . 
I 5 HOH B 44 544 52 HOH HOH . 
I 5 HOH B 45 545 40 HOH HOH . 
I 5 HOH B 46 546 31 HOH HOH . 
I 5 HOH B 47 547 117 HOH HOH . 
I 5 HOH B 48 548 60 HOH HOH . 
I 5 HOH B 49 549 106 HOH HOH . 
I 5 HOH B 50 550 38 HOH HOH . 
I 5 HOH B 51 551 126 HOH HOH . 
I 5 HOH B 52 552 93 HOH HOH . 
I 5 HOH B 53 553 90 HOH HOH . 
I 5 HOH B 54 554 91 HOH HOH . 
I 5 HOH B 55 555 111 HOH HOH . 
I 5 HOH B 56 556 123 HOH HOH . 
I 5 HOH B 57 557 112 HOH HOH . 
I 5 HOH B 58 558 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 17.456 0.464 12.431 1 43.93 ? C1 GOL 403 A 1 
HETATM 2 O O1 GOL . . . E 4 18.039 0.867 13.662 1 44.47 ? O1 GOL 403 A 1 
HETATM 3 C C2 GOL . . . E 4 16.892 -0.946 12.397 1 46.72 ? C2 GOL 403 A 1 
HETATM 4 O O2 GOL . . . E 4 15.853 -1.116 13.375 1 45.15 ? O2 GOL 403 A 1 
HETATM 5 C C3 GOL . . . E 4 16.341 -1.157 10.983 1 45.51 ? C3 GOL 403 A 1 
HETATM 6 O O3 GOL . . . E 4 15.765 -2.458 10.852 1 47.09 ? O3 GOL 403 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           6 
#