data_6MNP # _model_server_result.job_id ZBh93DP2hgKQHWQp-W4a3g _model_server_result.datetime_utc '2024-10-10 07:25:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mnp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6MNP # _exptl.entry_id 6MNP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.328 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(1H-tetrazol-5-ylmethyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MNP _cell.length_a 56.347 _cell.length_b 59.768 _cell.length_c 77.094 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 65 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 69 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 234 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 238 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C12 H12 N6 O S' _chem_comp.formula_weight 288.328 _chem_comp.id 1CE _chem_comp.mon_nstd_flag . _chem_comp.name 3-(1H-tetrazol-5-ylmethyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C12 1CE doub 1 n n C12 N7 1CE sing 2 n n C12 C11 1CE sing 3 n n N7 C6 1CE sing 4 n n N7 C8 1CE sing 5 n n C6 C3 1CE sing 6 n n C3 N2 1CE doub 7 n y C3 N4 1CE sing 8 n y N2 N1 1CE sing 9 n y N4 N5 1CE sing 10 n y N5 N1 1CE doub 11 n y C11 C13 1CE sing 12 n y C11 C10 1CE doub 13 n y C13 C16 1CE sing 14 n n C13 C14 1CE doub 15 n y C16 C17 1CE sing 16 n n C17 C18 1CE sing 17 n n C18 C19 1CE sing 18 n n C19 C14 1CE sing 19 n n C14 S15 1CE sing 20 n y S15 C10 1CE sing 21 n y C10 N9 1CE sing 22 n n N9 C8 1CE doub 23 n n C6 H6 1CE sing 24 n n C6 H6A 1CE sing 25 n n N4 HN4 1CE sing 26 n n C16 H16 1CE sing 27 n n C16 H16A 1CE sing 28 n n C17 H17 1CE sing 29 n n C17 H17A 1CE sing 30 n n C18 H18 1CE sing 31 n n C18 H18A 1CE sing 32 n n C19 H19 1CE sing 33 n n C19 H19A 1CE sing 34 n n C8 H8 1CE sing 35 n n # _atom_sites.entry_id 6MNP _atom_sites.fract_transf_matrix[1][1] 0.017747 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1CE A 1 301 2 1CE 1CE . C 2 1CE A 1 302 1 1CE 1CE . D 2 1CE A 1 303 3 1CE 1CE . E 3 GOL A 1 304 1 GOL GOL . F 4 HOH A 1 401 3 HOH HOH . F 4 HOH A 2 402 39 HOH HOH . F 4 HOH A 3 403 16 HOH HOH . F 4 HOH A 4 404 8 HOH HOH . F 4 HOH A 5 405 9 HOH HOH . F 4 HOH A 6 406 19 HOH HOH . F 4 HOH A 7 407 12 HOH HOH . F 4 HOH A 8 408 7 HOH HOH . F 4 HOH A 9 409 22 HOH HOH . F 4 HOH A 10 410 2 HOH HOH . F 4 HOH A 11 411 4 HOH HOH . F 4 HOH A 12 412 32 HOH HOH . F 4 HOH A 13 413 38 HOH HOH . F 4 HOH A 14 414 35 HOH HOH . F 4 HOH A 15 415 42 HOH HOH . F 4 HOH A 16 416 1 HOH HOH . F 4 HOH A 17 417 37 HOH HOH . F 4 HOH A 18 418 23 HOH HOH . F 4 HOH A 19 419 40 HOH HOH . F 4 HOH A 20 420 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O20 1CE . . . D 2 24.591 29.891 7.723 0.82 63.79 ? O20 1CE 303 A 1 HETATM 2 C C12 1CE . . . D 2 25.351 30.597 8.4 0.82 65.81 ? C12 1CE 303 A 1 HETATM 3 N N7 1CE . . . D 2 24.887 31.259 9.52 0.82 66.21 ? N7 1CE 303 A 1 HETATM 4 C C6 1CE . . . D 2 23.486 31.095 9.866 0.82 69.42 ? C6 1CE 303 A 1 HETATM 5 C C3 1CE . . . D 2 23.333 30.995 11.382 0.82 68.8 ? C3 1CE 303 A 1 HETATM 6 N N2 1CE . . . D 2 23.407 29.87 12.116 0.82 63.85 ? N2 1CE 303 A 1 HETATM 7 N N4 1CE . . . D 2 23.092 32.059 12.172 0.82 69.25 ? N4 1CE 303 A 1 HETATM 8 N N5 1CE . . . D 2 23.018 31.58 13.438 0.82 70.07 ? N5 1CE 303 A 1 HETATM 9 N N1 1CE . . . D 2 23.209 30.26 13.399 0.82 57.36 ? N1 1CE 303 A 1 HETATM 10 C C11 1CE . . . D 2 26.711 30.757 8.067 0.82 67.51 ? C11 1CE 303 A 1 HETATM 11 C C13 1CE . . . D 2 27.457 30.204 6.982 0.82 65.6 ? C13 1CE 303 A 1 HETATM 12 C C16 1CE . . . D 2 27.017 29.26 5.839 0.82 65.41 ? C16 1CE 303 A 1 HETATM 13 C C17 1CE . . . D 2 27.956 29.246 4.674 0.82 67.12 ? C17 1CE 303 A 1 HETATM 14 C C18 1CE . . . D 2 29.41 29.091 5.107 0.82 70.65 ? C18 1CE 303 A 1 HETATM 15 C C19 1CE . . . D 2 29.861 30.206 5.996 0.82 76.38 ? C19 1CE 303 A 1 HETATM 16 C C14 1CE . . . D 2 28.858 30.644 7.024 0.82 76.96 ? C14 1CE 303 A 1 HETATM 17 S S15 1CE . . . D 2 28.962 31.663 8.411 0.82 83.12 ? S15 1CE 303 A 1 HETATM 18 C C10 1CE . . . D 2 27.488 31.615 8.95 0.82 67.14 ? C10 1CE 303 A 1 HETATM 19 N N9 1CE . . . D 2 26.956 32.221 10.02 0.82 65.4 ? N9 1CE 303 A 1 HETATM 20 C C8 1CE . . . D 2 25.693 32.036 10.28 0.82 67.03 ? C8 1CE 303 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #