data_6MO4 # _model_server_result.job_id qJKb8uZxQ88164B8qXfuxA _model_server_result.datetime_utc '2024-11-27 16:38:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mo4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6MO4 # _exptl.entry_id 6MO4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(2R)-1-(hydroxyamino)-3-methyl-3-(methylsulfonyl)-1-oxobutan-2-yl]-4-(6-hydroxyhexa-1,3-diyn-1-yl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.72 _cell.angle_gamma 90 _cell.entry_id 6MO4 _cell.length_a 36.125 _cell.length_b 66.717 _cell.length_c 63.655 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MO4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 245 A ASP 241 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc2 A OD2 ASP 245 A ASP 241 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc3 B MG MG . A MG 301 1_555 C O5 JWM . A JWM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc4 B MG MG . A MG 301 1_555 C O4 JWM . A JWM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? # _chem_comp.formula 'C19 H22 N2 O6 S' _chem_comp.formula_weight 406.453 _chem_comp.id JWM _chem_comp.mon_nstd_flag . _chem_comp.name N-[(2R)-1-(hydroxyamino)-3-methyl-3-(methylsulfonyl)-1-oxobutan-2-yl]-4-(6-hydroxyhexa-1,3-diyn-1-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C JWM sing 173 n n C C1 JWM sing 174 n n C1 C2 JWM sing 175 n n C2 C3 JWM trip 176 n n C3 C4 JWM sing 177 n n C4 C5 JWM trip 178 n n C5 C6 JWM sing 179 n n C7 C6 JWM doub 180 n y C7 C8 JWM sing 181 n y C6 C11 JWM sing 182 n y C8 C9 JWM doub 183 n y C11 C10 JWM doub 184 n y C17 S JWM sing 185 n n C9 C10 JWM sing 186 n y C9 C12 JWM sing 187 n n O1 C12 JWM doub 188 n n C12 N JWM sing 189 n n O2 S JWM doub 190 n n S O3 JWM doub 191 n n S C14 JWM sing 192 n n N C13 JWM sing 193 n n C15 C14 JWM sing 194 n n C14 C13 JWM sing 195 n n C14 C16 JWM sing 196 n n C13 C18 JWM sing 197 n n C18 O4 JWM doub 198 n n C18 N1 JWM sing 199 n n N1 O5 JWM sing 200 n n N H1 JWM sing 201 n n C H2 JWM sing 202 n n C H3 JWM sing 203 n n O H4 JWM sing 204 n n C1 H5 JWM sing 205 n n C1 H6 JWM sing 206 n n C10 H7 JWM sing 207 n n C11 H8 JWM sing 208 n n C13 H9 JWM sing 209 n n C15 H10 JWM sing 210 n n C15 H11 JWM sing 211 n n C15 H12 JWM sing 212 n n C16 H13 JWM sing 213 n n C16 H14 JWM sing 214 n n C16 H15 JWM sing 215 n n C17 H16 JWM sing 216 n n C17 H17 JWM sing 217 n n C17 H18 JWM sing 218 n n C7 H19 JWM sing 219 n n C8 H20 JWM sing 220 n n N1 H21 JWM sing 221 n n O5 H22 JWM sing 222 n n # _atom_sites.entry_id 6MO4 _atom_sites.fract_transf_matrix[1][1] 0.027682 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000348 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014989 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 1 MG MG . C 3 JWM A 1 302 1 JWM 067 . D 4 HOH A 1 401 76 HOH HOH . D 4 HOH A 2 402 150 HOH HOH . D 4 HOH A 3 403 133 HOH HOH . D 4 HOH A 4 404 95 HOH HOH . D 4 HOH A 5 405 77 HOH HOH . D 4 HOH A 6 406 104 HOH HOH . D 4 HOH A 7 407 52 HOH HOH . D 4 HOH A 8 408 126 HOH HOH . D 4 HOH A 9 409 129 HOH HOH . D 4 HOH A 10 410 78 HOH HOH . D 4 HOH A 11 411 130 HOH HOH . D 4 HOH A 12 412 141 HOH HOH . D 4 HOH A 13 413 10 HOH HOH . D 4 HOH A 14 414 39 HOH HOH . D 4 HOH A 15 415 11 HOH HOH . D 4 HOH A 16 416 54 HOH HOH . D 4 HOH A 17 417 45 HOH HOH . D 4 HOH A 18 418 125 HOH HOH . D 4 HOH A 19 419 4 HOH HOH . D 4 HOH A 20 420 55 HOH HOH . D 4 HOH A 21 421 94 HOH HOH . D 4 HOH A 22 422 41 HOH HOH . D 4 HOH A 23 423 6 HOH HOH . D 4 HOH A 24 424 75 HOH HOH . D 4 HOH A 25 425 67 HOH HOH . D 4 HOH A 26 426 124 HOH HOH . D 4 HOH A 27 427 136 HOH HOH . D 4 HOH A 28 428 96 HOH HOH . D 4 HOH A 29 429 88 HOH HOH . D 4 HOH A 30 430 12 HOH HOH . D 4 HOH A 31 431 116 HOH HOH . D 4 HOH A 32 432 117 HOH HOH . D 4 HOH A 33 433 29 HOH HOH . D 4 HOH A 34 434 70 HOH HOH . D 4 HOH A 35 435 57 HOH HOH . D 4 HOH A 36 436 43 HOH HOH . D 4 HOH A 37 437 27 HOH HOH . D 4 HOH A 38 438 22 HOH HOH . D 4 HOH A 39 439 131 HOH HOH . D 4 HOH A 40 440 149 HOH HOH . D 4 HOH A 41 441 122 HOH HOH . D 4 HOH A 42 442 65 HOH HOH . D 4 HOH A 43 443 74 HOH HOH . D 4 HOH A 44 444 26 HOH HOH . D 4 HOH A 45 445 106 HOH HOH . D 4 HOH A 46 446 37 HOH HOH . D 4 HOH A 47 447 38 HOH HOH . D 4 HOH A 48 448 33 HOH HOH . D 4 HOH A 49 449 120 HOH HOH . D 4 HOH A 50 450 90 HOH HOH . D 4 HOH A 51 451 14 HOH HOH . D 4 HOH A 52 452 5 HOH HOH . D 4 HOH A 53 453 1 HOH HOH . D 4 HOH A 54 454 47 HOH HOH . D 4 HOH A 55 455 56 HOH HOH . D 4 HOH A 56 456 108 HOH HOH . D 4 HOH A 57 457 64 HOH HOH . D 4 HOH A 58 458 100 HOH HOH . D 4 HOH A 59 459 151 HOH HOH . D 4 HOH A 60 460 48 HOH HOH . D 4 HOH A 61 461 36 HOH HOH . D 4 HOH A 62 462 69 HOH HOH . D 4 HOH A 63 463 145 HOH HOH . D 4 HOH A 64 464 119 HOH HOH . D 4 HOH A 65 465 79 HOH HOH . D 4 HOH A 66 466 85 HOH HOH . D 4 HOH A 67 467 8 HOH HOH . D 4 HOH A 68 468 51 HOH HOH . D 4 HOH A 69 469 111 HOH HOH . D 4 HOH A 70 470 13 HOH HOH . D 4 HOH A 71 471 7 HOH HOH . D 4 HOH A 72 472 32 HOH HOH . D 4 HOH A 73 473 35 HOH HOH . D 4 HOH A 74 474 153 HOH HOH . D 4 HOH A 75 475 112 HOH HOH . D 4 HOH A 76 476 73 HOH HOH . D 4 HOH A 77 477 98 HOH HOH . D 4 HOH A 78 478 59 HOH HOH . D 4 HOH A 79 479 132 HOH HOH . D 4 HOH A 80 480 24 HOH HOH . D 4 HOH A 81 481 154 HOH HOH . D 4 HOH A 82 482 107 HOH HOH . D 4 HOH A 83 483 46 HOH HOH . D 4 HOH A 84 484 2 HOH HOH . D 4 HOH A 85 485 114 HOH HOH . D 4 HOH A 86 486 68 HOH HOH . D 4 HOH A 87 487 19 HOH HOH . D 4 HOH A 88 488 53 HOH HOH . D 4 HOH A 89 489 91 HOH HOH . D 4 HOH A 90 490 61 HOH HOH . D 4 HOH A 91 491 87 HOH HOH . D 4 HOH A 92 492 147 HOH HOH . D 4 HOH A 93 493 86 HOH HOH . D 4 HOH A 94 494 93 HOH HOH . D 4 HOH A 95 495 50 HOH HOH . D 4 HOH A 96 496 142 HOH HOH . D 4 HOH A 97 497 42 HOH HOH . D 4 HOH A 98 498 15 HOH HOH . D 4 HOH A 99 499 3 HOH HOH . D 4 HOH A 100 500 60 HOH HOH . D 4 HOH A 101 501 62 HOH HOH . D 4 HOH A 102 502 140 HOH HOH . D 4 HOH A 103 503 83 HOH HOH . D 4 HOH A 104 504 34 HOH HOH . D 4 HOH A 105 505 17 HOH HOH . D 4 HOH A 106 506 25 HOH HOH . D 4 HOH A 107 507 82 HOH HOH . D 4 HOH A 108 508 138 HOH HOH . D 4 HOH A 109 509 156 HOH HOH . D 4 HOH A 110 510 23 HOH HOH . D 4 HOH A 111 511 58 HOH HOH . D 4 HOH A 112 512 143 HOH HOH . D 4 HOH A 113 513 21 HOH HOH . D 4 HOH A 114 514 89 HOH HOH . D 4 HOH A 115 515 134 HOH HOH . D 4 HOH A 116 516 103 HOH HOH . D 4 HOH A 117 517 113 HOH HOH . D 4 HOH A 118 518 63 HOH HOH . D 4 HOH A 119 519 135 HOH HOH . D 4 HOH A 120 520 81 HOH HOH . D 4 HOH A 121 521 155 HOH HOH . D 4 HOH A 122 522 84 HOH HOH . D 4 HOH A 123 523 40 HOH HOH . D 4 HOH A 124 524 109 HOH HOH . D 4 HOH A 125 525 20 HOH HOH . D 4 HOH A 126 526 97 HOH HOH . D 4 HOH A 127 527 115 HOH HOH . D 4 HOH A 128 528 49 HOH HOH . D 4 HOH A 129 529 9 HOH HOH . D 4 HOH A 130 530 16 HOH HOH . D 4 HOH A 131 531 152 HOH HOH . D 4 HOH A 132 532 146 HOH HOH . D 4 HOH A 133 533 92 HOH HOH . D 4 HOH A 134 534 80 HOH HOH . D 4 HOH A 135 535 28 HOH HOH . D 4 HOH A 136 536 30 HOH HOH . D 4 HOH A 137 537 44 HOH HOH . D 4 HOH A 138 538 66 HOH HOH . D 4 HOH A 139 539 18 HOH HOH . D 4 HOH A 140 540 71 HOH HOH . D 4 HOH A 141 541 105 HOH HOH . D 4 HOH A 142 542 137 HOH HOH . D 4 HOH A 143 543 101 HOH HOH . D 4 HOH A 144 544 110 HOH HOH . D 4 HOH A 145 545 72 HOH HOH . D 4 HOH A 146 546 102 HOH HOH . D 4 HOH A 147 547 123 HOH HOH . D 4 HOH A 148 548 31 HOH HOH . D 4 HOH A 149 549 99 HOH HOH . D 4 HOH A 150 550 121 HOH HOH . D 4 HOH A 151 551 128 HOH HOH . D 4 HOH A 152 552 127 HOH HOH . D 4 HOH A 153 553 139 HOH HOH . D 4 HOH A 154 554 118 HOH HOH . D 4 HOH A 155 555 144 HOH HOH . D 4 HOH A 156 556 148 HOH HOH . D 4 HOH A 157 557 157 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N JWM . . . C 3 -11.897 -16.152 -24.699 1 18.7 ? N JWM 302 A 1 HETATM 2 C C JWM . . . C 3 -19.436 -20.022 -33.629 1 39.03 ? C JWM 302 A 1 HETATM 3 O O JWM . . . C 3 -18.201 -20.308 -34.312 1 46.19 ? O JWM 302 A 1 HETATM 4 C C1 JWM . . . C 3 -19.402 -18.616 -33.036 1 33.11 ? C1 JWM 302 A 1 HETATM 5 C C10 JWM . . . C 3 -14.085 -17.048 -26.38 1 15.7 ? C10 JWM 302 A 1 HETATM 6 C C11 JWM . . . C 3 -15.08 -17.285 -27.317 1 17.61 ? C11 JWM 302 A 1 HETATM 7 C C12 JWM . . . C 3 -11.677 -17.012 -25.691 1 21.41 ? C12 JWM 302 A 1 HETATM 8 C C13 JWM . . . C 3 -10.817 -15.708 -23.832 1 19.38 ? C13 JWM 302 A 1 HETATM 9 C C14 JWM . . . C 3 -10.416 -14.247 -24.096 1 23.04 ? C14 JWM 302 A 1 HETATM 10 C C15 JWM . . . C 3 -11.641 -13.354 -24.267 1 24.27 ? C15 JWM 302 A 1 HETATM 11 C C16 JWM . . . C 3 -9.575 -13.721 -22.934 1 23.95 ? C16 JWM 302 A 1 HETATM 12 C C17 JWM . . . C 3 -9.885 -14.718 -26.853 1 29.55 ? C17 JWM 302 A 1 HETATM 13 C C18 JWM . . . C 3 -11.233 -15.91 -22.386 1 21.46 ? C18 JWM 302 A 1 HETATM 14 C C2 JWM . . . C 3 -18.349 -18.468 -32.013 1 25.35 ? C2 JWM 302 A 1 HETATM 15 C C3 JWM . . . C 3 -17.56 -18.379 -31.139 1 24.63 ? C3 JWM 302 A 1 HETATM 16 C C4 JWM . . . C 3 -16.593 -18.252 -30.164 1 23.41 ? C4 JWM 302 A 1 HETATM 17 C C5 JWM . . . C 3 -15.711 -18.011 -29.409 1 23.08 ? C5 JWM 302 A 1 HETATM 18 C C6 JWM . . . C 3 -14.742 -17.741 -28.601 1 17.59 ? C6 JWM 302 A 1 HETATM 19 C C7 JWM . . . C 3 -13.419 -17.956 -28.926 1 21.82 ? C7 JWM 302 A 1 HETATM 20 C C8 JWM . . . C 3 -12.412 -17.71 -27.98 1 22.71 ? C8 JWM 302 A 1 HETATM 21 C C9 JWM . . . C 3 -12.75 -17.259 -26.706 1 15.18 ? C9 JWM 302 A 1 HETATM 22 N N1 JWM . . . C 3 -10.437 -16.654 -21.608 1 19.41 ? N1 JWM 302 A 1 HETATM 23 O O1 JWM . . . C 3 -10.612 -17.611 -25.793 1 22.04 ? O1 JWM 302 A 1 HETATM 24 O O2 JWM . . . C 3 -9.224 -12.649 -25.625 1 30.04 ? O2 JWM 302 A 1 HETATM 25 O O3 JWM . . . C 3 -8.121 -14.665 -25.122 1 38.93 ? O3 JWM 302 A 1 HETATM 26 O O4 JWM . . . C 3 -12.284 -15.426 -21.98 1 18.36 ? O4 JWM 302 A 1 HETATM 27 O O5 JWM . . . C 3 -10.723 -16.803 -20.237 1 16.89 ? O5 JWM 302 A 1 HETATM 28 S S JWM . . . C 3 -9.39 -14.062 -25.427 1 28.94 ? S JWM 302 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #