data_6MOY # _model_server_result.job_id YYv9SeytW_Qk_t_9ccoQ9Q _model_server_result.datetime_utc '2024-10-11 05:30:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6moy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6MOY # _exptl.entry_id 6MOY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MOY _cell.length_a 75.834 _cell.length_b 100.882 _cell.length_c 171.633 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MOY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6MOY _atom_sites.fract_transf_matrix[1][1] 0.013187 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005826 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 501 501 NAG NAG . D 2 NAG B 1 481 481 NAG NAG . E 3 HOH A 1 602 602 HOH HOH . E 3 HOH A 2 603 603 HOH HOH . E 3 HOH A 3 604 604 HOH HOH . E 3 HOH A 4 605 605 HOH HOH . E 3 HOH A 5 606 606 HOH HOH . E 3 HOH A 6 607 607 HOH HOH . E 3 HOH A 7 608 608 HOH HOH . E 3 HOH A 8 610 610 HOH HOH . E 3 HOH A 9 611 611 HOH HOH . E 3 HOH A 10 612 612 HOH HOH . E 3 HOH A 11 613 613 HOH HOH . E 3 HOH A 12 614 614 HOH HOH . E 3 HOH A 13 615 615 HOH HOH . E 3 HOH A 14 616 616 HOH HOH . E 3 HOH A 15 617 617 HOH HOH . E 3 HOH A 16 619 619 HOH HOH . E 3 HOH A 17 620 620 HOH HOH . E 3 HOH A 18 621 621 HOH HOH . E 3 HOH A 19 622 622 HOH HOH . E 3 HOH A 20 625 625 HOH HOH . E 3 HOH A 21 626 626 HOH HOH . F 3 HOH B 1 581 581 HOH HOH . F 3 HOH B 2 584 584 HOH HOH . F 3 HOH B 3 586 586 HOH HOH . F 3 HOH B 4 587 587 HOH HOH . F 3 HOH B 5 591 591 HOH HOH . F 3 HOH B 6 595 595 HOH HOH . F 3 HOH B 7 596 596 HOH HOH . F 3 HOH B 8 597 597 HOH HOH . F 3 HOH B 9 598 598 HOH HOH . F 3 HOH B 10 599 599 HOH HOH . F 3 HOH B 11 602 602 HOH HOH . F 3 HOH B 12 603 603 HOH HOH . F 3 HOH B 13 606 606 HOH HOH . F 3 HOH B 14 614 614 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . C 2 22.575 38.41 20.927 1 78.19 ? C1 NAG 501 A 1 HETATM 2 C C2 NAG . . . C 2 21.964 37.385 21.876 1 75.69 ? C2 NAG 501 A 1 HETATM 3 C C3 NAG . . . C 2 21.446 38.079 23.132 1 77.06 ? C3 NAG 501 A 1 HETATM 4 C C4 NAG . . . C 2 22.546 38.917 23.769 1 79.6 ? C4 NAG 501 A 1 HETATM 5 C C5 NAG . . . C 2 23.153 39.866 22.738 1 80.5 ? C5 NAG 501 A 1 HETATM 6 C C6 NAG . . . C 2 24.349 40.624 23.264 1 80.32 ? C6 NAG 501 A 1 HETATM 7 C C7 NAG . . . C 2 21.117 35.589 20.431 1 71.79 ? C7 NAG 501 A 1 HETATM 8 C C8 NAG . . . C 2 19.899 34.941 19.85 1 70.58 ? C8 NAG 501 A 1 HETATM 9 N N2 NAG . . . C 2 20.897 36.64 21.228 1 74.07 ? N2 NAG 501 A 1 HETATM 10 O O1 NAG . . . C 2 23.102 37.759 19.819 1 83.78 ? O1 NAG 501 A 1 HETATM 11 O O3 NAG . . . C 2 20.972 37.103 24.053 1 70.25 ? O3 NAG 501 A 1 HETATM 12 O O4 NAG . . . C 2 22.015 39.678 24.847 1 75.74 ? O4 NAG 501 A 1 HETATM 13 O O5 NAG . . . C 2 23.607 39.125 21.596 1 77.16 ? O5 NAG 501 A 1 HETATM 14 O O6 NAG . . . C 2 25.033 41.307 22.222 1 79.4 ? O6 NAG 501 A 1 HETATM 15 O O7 NAG . . . C 2 22.249 35.18 20.19 1 71 ? O7 NAG 501 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #