data_6MP9
#
_model_server_result.job_id            C-l4G8zs-Sfli6tMpuqxyg 
_model_server_result.datetime_utc      '2024-11-26 08:41:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mp9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6MP9 
#
_exptl.entry_id    6MP9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              173.17 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-carbamimidamido-2-oxopentanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.12 
_cell.angle_gamma         90 
_cell.entry_id            6MP9 
_cell.length_a            80.676 
_cell.length_b            66.94 
_cell.length_c            62.856 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MP9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 147 A HIS 168 1_555 D FE FE2 . A FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc2 A OE1 GLU 149 A GLU 170 1_555 D FE FE2 . A FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc3 A NE2 HIS 295 A HIS 316 1_555 D FE FE2 . A FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc4 B O10 JX7 . A JX7 401 1_555 D FE FE2 . A FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? 
metalc ? metalc5 C O3 SIN . A SIN 402 1_555 D FE FE2 . A FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc6 C O4 SIN . A SIN 402 1_555 D FE FE2 . A FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
#
_chem_comp.formula           'C6 H11 N3 O3' 
_chem_comp.formula_weight    173.17 
_chem_comp.id                JX7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-carbamimidamido-2-oxopentanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O11 C1 JX7 doub 173 n n 
O10 C2 JX7 doub 174 n n 
C1 C2 JX7 sing 175 n n 
C1 O12 JX7 sing 176 n n 
C2 C3 JX7 sing 177 n n 
C3 C4 JX7 sing 178 n n 
C5 C4 JX7 sing 179 n n 
C5 N6 JX7 sing 180 n n 
N6 C7 JX7 sing 181 n n 
C7 N8 JX7 doub 182 n n 
C7 N13 JX7 sing 183 n n 
C3 H1 JX7 sing 184 n n 
C3 H2 JX7 sing 185 n n 
C4 H3 JX7 sing 186 n n 
C4 H4 JX7 sing 187 n n 
C5 H5 JX7 sing 188 n n 
C5 H6 JX7 sing 189 n n 
N6 H7 JX7 sing 190 n n 
N8 H8 JX7 sing 191 n n 
O12 H9 JX7 sing 192 n n 
N13 H10 JX7 sing 193 n n 
N13 H11 JX7 sing 194 n n 
#
_atom_sites.entry_id                     6MP9 
_atom_sites.fract_transf_matrix[1][1]    0.012395 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004296 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014939 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016838 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 JX7 A 1 401 1 JX7 KAR . 
C 3 SIN A 1 402 1 SIN SIN . 
D 4 FE2 A 1 403 1 FE2 FE2 . 
E 5 HOH A 1 501 41 HOH HOH . 
E 5 HOH A 2 502 17 HOH HOH . 
E 5 HOH A 3 503 3 HOH HOH . 
E 5 HOH A 4 504 102 HOH HOH . 
E 5 HOH A 5 505 40 HOH HOH . 
E 5 HOH A 6 506 4 HOH HOH . 
E 5 HOH A 7 507 13 HOH HOH . 
E 5 HOH A 8 508 80 HOH HOH . 
E 5 HOH A 9 509 83 HOH HOH . 
E 5 HOH A 10 510 8 HOH HOH . 
E 5 HOH A 11 511 34 HOH HOH . 
E 5 HOH A 12 512 1 HOH HOH . 
E 5 HOH A 13 513 7 HOH HOH . 
E 5 HOH A 14 514 93 HOH HOH . 
E 5 HOH A 15 515 60 HOH HOH . 
E 5 HOH A 16 516 6 HOH HOH . 
E 5 HOH A 17 517 62 HOH HOH . 
E 5 HOH A 18 518 101 HOH HOH . 
E 5 HOH A 19 519 98 HOH HOH . 
E 5 HOH A 20 520 10 HOH HOH . 
E 5 HOH A 21 521 48 HOH HOH . 
E 5 HOH A 22 522 36 HOH HOH . 
E 5 HOH A 23 523 64 HOH HOH . 
E 5 HOH A 24 524 69 HOH HOH . 
E 5 HOH A 25 525 57 HOH HOH . 
E 5 HOH A 26 526 39 HOH HOH . 
E 5 HOH A 27 527 23 HOH HOH . 
E 5 HOH A 28 528 19 HOH HOH . 
E 5 HOH A 29 529 22 HOH HOH . 
E 5 HOH A 30 530 84 HOH HOH . 
E 5 HOH A 31 531 35 HOH HOH . 
E 5 HOH A 32 532 38 HOH HOH . 
E 5 HOH A 33 533 16 HOH HOH . 
E 5 HOH A 34 534 18 HOH HOH . 
E 5 HOH A 35 535 79 HOH HOH . 
E 5 HOH A 36 536 78 HOH HOH . 
E 5 HOH A 37 537 49 HOH HOH . 
E 5 HOH A 38 538 15 HOH HOH . 
E 5 HOH A 39 539 30 HOH HOH . 
E 5 HOH A 40 540 11 HOH HOH . 
E 5 HOH A 41 541 52 HOH HOH . 
E 5 HOH A 42 542 77 HOH HOH . 
E 5 HOH A 43 543 89 HOH HOH . 
E 5 HOH A 44 544 28 HOH HOH . 
E 5 HOH A 45 545 92 HOH HOH . 
E 5 HOH A 46 546 29 HOH HOH . 
E 5 HOH A 47 547 73 HOH HOH . 
E 5 HOH A 48 548 33 HOH HOH . 
E 5 HOH A 49 549 59 HOH HOH . 
E 5 HOH A 50 550 20 HOH HOH . 
E 5 HOH A 51 551 26 HOH HOH . 
E 5 HOH A 52 552 46 HOH HOH . 
E 5 HOH A 53 553 25 HOH HOH . 
E 5 HOH A 54 554 63 HOH HOH . 
E 5 HOH A 55 555 5 HOH HOH . 
E 5 HOH A 56 556 100 HOH HOH . 
E 5 HOH A 57 557 68 HOH HOH . 
E 5 HOH A 58 558 58 HOH HOH . 
E 5 HOH A 59 559 31 HOH HOH . 
E 5 HOH A 60 560 76 HOH HOH . 
E 5 HOH A 61 561 27 HOH HOH . 
E 5 HOH A 62 562 44 HOH HOH . 
E 5 HOH A 63 563 53 HOH HOH . 
E 5 HOH A 64 564 55 HOH HOH . 
E 5 HOH A 65 565 9 HOH HOH . 
E 5 HOH A 66 566 65 HOH HOH . 
E 5 HOH A 67 567 24 HOH HOH . 
E 5 HOH A 68 568 37 HOH HOH . 
E 5 HOH A 69 569 2 HOH HOH . 
E 5 HOH A 70 570 99 HOH HOH . 
E 5 HOH A 71 571 42 HOH HOH . 
E 5 HOH A 72 572 45 HOH HOH . 
E 5 HOH A 73 573 96 HOH HOH . 
E 5 HOH A 74 574 66 HOH HOH . 
E 5 HOH A 75 575 12 HOH HOH . 
E 5 HOH A 76 576 43 HOH HOH . 
E 5 HOH A 77 577 21 HOH HOH . 
E 5 HOH A 78 578 104 HOH HOH . 
E 5 HOH A 79 579 88 HOH HOH . 
E 5 HOH A 80 580 90 HOH HOH . 
E 5 HOH A 81 581 97 HOH HOH . 
E 5 HOH A 82 582 81 HOH HOH . 
E 5 HOH A 83 583 75 HOH HOH . 
E 5 HOH A 84 584 50 HOH HOH . 
E 5 HOH A 85 585 47 HOH HOH . 
E 5 HOH A 86 586 87 HOH HOH . 
E 5 HOH A 87 587 67 HOH HOH . 
E 5 HOH A 88 588 54 HOH HOH . 
E 5 HOH A 89 589 91 HOH HOH . 
E 5 HOH A 90 590 14 HOH HOH . 
E 5 HOH A 91 591 86 HOH HOH . 
E 5 HOH A 92 592 72 HOH HOH . 
E 5 HOH A 93 593 74 HOH HOH . 
E 5 HOH A 94 594 56 HOH HOH . 
E 5 HOH A 95 595 71 HOH HOH . 
E 5 HOH A 96 596 85 HOH HOH . 
E 5 HOH A 97 597 103 HOH HOH . 
E 5 HOH A 98 598 94 HOH HOH . 
E 5 HOH A 99 599 51 HOH HOH . 
E 5 HOH A 100 600 82 HOH HOH . 
E 5 HOH A 101 601 70 HOH HOH . 
E 5 HOH A 102 602 95 HOH HOH . 
E 5 HOH A 103 603 32 HOH HOH . 
E 5 HOH A 104 604 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O10 JX7 . . . B 2 9.687 6.139 19.288 1 34.67 ? O10 JX7 401 A 1 
HETATM 2 C C7 JX7 . . . B 2 8.566 11.213 22.109 1 30.94 ? C7 JX7 401 A 1 
HETATM 3 C C3 JX7 . . . B 2 10.991 8.058 19.977 1 33.47 ? C3 JX7 401 A 1 
HETATM 4 C C4 JX7 . . . B 2 9.714 8.769 20.402 1 32.58 ? C4 JX7 401 A 1 
HETATM 5 C C5 JX7 . . . B 2 9.875 10.278 20.268 1 32.22 ? C5 JX7 401 A 1 
HETATM 6 C C2 JX7 . . . B 2 10.791 6.622 19.531 1 34.14 ? C2 JX7 401 A 1 
HETATM 7 C C1 JX7 . . . B 2 11.996 5.81 19.377 1 34.17 ? C1 JX7 401 A 1 
HETATM 8 N N6 JX7 . . . B 2 8.736 11 20.804 1 31.48 ? N6 JX7 401 A 1 
HETATM 9 N N8 JX7 . . . B 2 7.405 11.89 22.576 1 30.66 ? N8 JX7 401 A 1 
HETATM 10 O O11 JX7 . . . B 2 12.182 5.201 18.302 1 34.45 ? O11 JX7 401 A 1 
HETATM 11 O O12 JX7 . . . B 2 12.819 5.771 20.317 1 32.94 ? O12 JX7 401 A 1 
HETATM 12 N N13 JX7 . . . B 2 9.425 10.801 22.935 1 30.65 ? N13 JX7 401 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#