data_6MQ3 # _model_server_result.job_id OHSNfg7Mwrhe8VZfFpa2KQ _model_server_result.datetime_utc '2024-12-23 16:29:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 6MQ3 # _exptl.entry_id 6MQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 494.649 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "{(8R,9S,10S)-9-(2',3'-dimethyl[1,1'-biphenyl]-4-yl)-6-[(1-methyl-1H-imidazol-2-yl)sulfonyl]-1,6-diazabicyclo[6.2.0]decan-10-yl}methanol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MQ3 _cell.length_a 263.254 _cell.length_b 263.254 _cell.length_c 91.234 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C27 H34 N4 O3 S' _chem_comp.formula_weight 494.649 _chem_comp.id J22 _chem_comp.mon_nstd_flag . _chem_comp.name "{(8R,9S,10S)-9-(2',3'-dimethyl[1,1'-biphenyl]-4-yl)-6-[(1-methyl-1H-imidazol-2-yl)sulfonyl]-1,6-diazabicyclo[6.2.0]decan-10-yl}methanol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O35 S02 J22 doub 204 n n C06 C05 J22 doub 205 n y C06 N07 J22 sing 206 n y C05 N04 J22 sing 207 n y C08 N07 J22 sing 208 n n N07 C03 J22 sing 209 n y N04 C03 J22 doub 210 n y C03 S02 J22 sing 211 n n S02 O01 J22 doub 212 n n S02 N09 J22 sing 213 n n C13 C12 J22 sing 214 n n C13 C14 J22 sing 215 n n C12 N09 J22 sing 216 n n N09 C10 J22 sing 217 n n C14 C15 J22 sing 218 n n C10 C11 J22 sing 219 n n C15 N16 J22 sing 220 n n C11 N16 J22 sing 221 n n C11 C20 J22 sing 222 n n N16 C17 J22 sing 223 n n C34 C33 J22 doub 224 n y C34 C21 J22 sing 225 n y C33 C24 J22 sing 226 n y C20 C21 J22 sing 227 n n C20 C17 J22 sing 228 n n C32 C31 J22 doub 229 n y C32 C25 J22 sing 230 n y C21 C22 J22 doub 231 n y C31 C30 J22 sing 232 n y C17 C18 J22 sing 233 n n C24 C25 J22 sing 234 n n C24 C23 J22 doub 235 n y C25 C26 J22 doub 236 n y C22 C23 J22 sing 237 n y C30 C28 J22 doub 238 n y C18 O19 J22 sing 239 n n C26 C28 J22 sing 240 n y C26 C27 J22 sing 241 n n C28 C29 J22 sing 242 n n C05 H051 J22 sing 243 n n C06 H061 J22 sing 244 n n C08 H083 J22 sing 245 n n C08 H081 J22 sing 246 n n C08 H082 J22 sing 247 n n C10 H102 J22 sing 248 n n C10 H101 J22 sing 249 n n C11 H111 J22 sing 250 n n C12 H121 J22 sing 251 n n C12 H122 J22 sing 252 n n C13 H132 J22 sing 253 n n C13 H131 J22 sing 254 n n C14 H142 J22 sing 255 n n C14 H141 J22 sing 256 n n C15 H151 J22 sing 257 n n C15 H152 J22 sing 258 n n C17 H171 J22 sing 259 n n C18 H181 J22 sing 260 n n C18 H182 J22 sing 261 n n C20 H201 J22 sing 262 n n C22 H221 J22 sing 263 n n C23 H231 J22 sing 264 n n C27 H273 J22 sing 265 n n C27 H272 J22 sing 266 n n C27 H271 J22 sing 267 n n C29 H292 J22 sing 268 n n C29 H291 J22 sing 269 n n C29 H293 J22 sing 270 n n C30 H301 J22 sing 271 n n C31 H311 J22 sing 272 n n C32 H321 J22 sing 273 n n C33 H331 J22 sing 274 n n C34 H341 J22 sing 275 n n O19 H191 J22 sing 276 n n # _atom_sites.entry_id 6MQ3 _atom_sites.fract_transf_matrix[1][1] 0.003799 _atom_sites.fract_transf_matrix[1][2] 0.002193 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 J22 A 1 1101 1 J22 J22 . D 3 EPE A 1 1102 1102 EPE EPE . E 2 J22 B 1 1101 1 J22 J22 . F 3 EPE B 1 1102 1102 EPE EPE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C03 J22 . . . C 2 109.847 -52.018 14.086 0.85 102.07 ? C03 J22 1101 A 1 HETATM 2 C C05 J22 . . . C 2 111.598 -51.142 12.979 0.85 110.18 ? C05 J22 1101 A 1 HETATM 3 C C06 J22 . . . C 2 112.057 -52.277 13.698 0.85 107.42 ? C06 J22 1101 A 1 HETATM 4 C C08 J22 . . . C 2 110.951 -53.969 15.244 0.85 94.04 ? C08 J22 1101 A 1 HETATM 5 C C10 J22 . . . C 2 106.933 -49.946 14.147 0.85 91.39 ? C10 J22 1101 A 1 HETATM 6 C C11 J22 . . . C 2 105.944 -49.598 15.3 0.85 80.04 ? C11 J22 1101 A 1 HETATM 7 C C12 J22 . . . C 2 105.875 -52.021 13.182 0.85 105.47 ? C12 J22 1101 A 1 HETATM 8 C C13 J22 . . . C 2 104.611 -52.186 14.114 0.85 89.78 ? C13 J22 1101 A 1 HETATM 9 C C14 J22 . . . C 2 103.478 -51.097 13.938 0.85 78.7 ? C14 J22 1101 A 1 HETATM 10 C C15 J22 . . . C 2 104.043 -49.662 13.625 0.85 78.51 ? C15 J22 1101 A 1 HETATM 11 C C17 J22 . . . C 2 105.004 -47.647 15.329 0.85 85.41 ? C17 J22 1101 A 1 HETATM 12 C C18 J22 . . . C 2 105.357 -46.626 14.218 0.85 87.2 ? C18 J22 1101 A 1 HETATM 13 C C20 J22 . . . C 2 106.249 -48.271 16.036 0.85 90.06 ? C20 J22 1101 A 1 HETATM 14 C C21 J22 . . . C 2 106.146 -48.255 17.58 0.85 77.39 ? C21 J22 1101 A 1 HETATM 15 C C22 J22 . . . C 2 107.223 -47.777 18.361 0.85 83.94 ? C22 J22 1101 A 1 HETATM 16 C C23 J22 . . . C 2 107.127 -47.738 19.776 0.85 78.63 ? C23 J22 1101 A 1 HETATM 17 C C24 J22 . . . C 2 105.959 -48.178 20.461 0.85 59.43 ? C24 J22 1101 A 1 HETATM 18 C C25 J22 . . . C 2 105.863 -48.102 21.906 0.85 60.41 ? C25 J22 1101 A 1 HETATM 19 C C26 J22 . . . C 2 104.903 -47.243 22.538 0.85 67.29 ? C26 J22 1101 A 1 HETATM 20 C C27 J22 . . . C 2 103.946 -46.425 21.652 0.85 68.11 ? C27 J22 1101 A 1 HETATM 21 C C28 J22 . . . C 2 104.822 -47.159 23.951 0.85 64.35 ? C28 J22 1101 A 1 HETATM 22 C C29 J22 . . . C 2 103.786 -46.248 24.611 0.85 55.79 ? C29 J22 1101 A 1 HETATM 23 C C30 J22 . . . C 2 105.715 -47.924 24.746 0.85 56.63 ? C30 J22 1101 A 1 HETATM 24 C C31 J22 . . . C 2 106.688 -48.777 24.145 0.85 62.52 ? C31 J22 1101 A 1 HETATM 25 C C32 J22 . . . C 2 106.76 -48.857 22.73 0.85 70.21 ? C32 J22 1101 A 1 HETATM 26 C C33 J22 . . . C 2 104.871 -48.637 19.651 0.85 62.06 ? C33 J22 1101 A 1 HETATM 27 C C34 J22 . . . C 2 104.965 -48.674 18.235 0.85 72.8 ? C34 J22 1101 A 1 HETATM 28 N N04 J22 . . . C 2 110.219 -51.012 13.247 0.85 108.6 ? N04 J22 1101 A 1 HETATM 29 N N07 J22 . . . C 2 110.952 -52.773 14.359 0.85 101.31 ? N07 J22 1101 A 1 HETATM 30 N N09 J22 . . . C 2 107.065 -51.399 13.895 0.85 101.92 ? N09 J22 1101 A 1 HETATM 31 N N16 J22 . . . C 2 104.592 -49.015 14.867 0.85 82.95 ? N16 J22 1101 A 1 HETATM 32 O O01 J22 . . . C 2 108.129 -51.993 16.167 0.85 112.4 ? O01 J22 1101 A 1 HETATM 33 O O19 J22 . . . C 2 106.565 -45.918 14.674 0.85 97.07 ? O19 J22 1101 A 1 HETATM 34 O O35 J22 . . . C 2 107.876 -53.717 14.687 0.85 94.42 ? O35 J22 1101 A 1 HETATM 35 S S02 J22 . . . C 2 108.161 -52.304 14.74 0.85 101.44 ? S02 J22 1101 A 1 HETATM 36 H H051 J22 . . . C 2 112.076 -50.567 12.428 0.85 132.39 ? H051 J22 1101 A 1 HETATM 37 H H061 J22 . . . C 2 112.927 -52.604 13.714 0.85 129.08 ? H061 J22 1101 A 1 HETATM 38 H H083 J22 . . . C 2 111.807 -54.323 15.4 0.85 113.02 ? H083 J22 1101 A 1 HETATM 39 H H081 J22 . . . C 2 110.424 -54.658 14.884 0.85 113.02 ? H081 J22 1101 A 1 HETATM 40 H H082 J22 . . . C 2 110.582 -53.763 16.083 0.85 113.02 ? H082 J22 1101 A 1 HETATM 41 H H102 J22 . . . C 2 106.68 -49.454 13.388 0.85 109.84 ? H102 J22 1101 A 1 HETATM 42 H H101 J22 . . . C 2 107.764 -49.568 14.366 0.85 109.84 ? H101 J22 1101 A 1 HETATM 43 H H111 J22 . . . C 2 105.808 -50.312 15.894 0.85 96.21 ? H111 J22 1101 A 1 HETATM 44 H H121 J22 . . . C 2 105.595 -51.526 12.434 0.85 126.73 ? H121 J22 1101 A 1 HETATM 45 H H122 J22 . . . C 2 106.125 -52.847 12.813 0.85 126.73 ? H122 J22 1101 A 1 HETATM 46 H H132 J22 . . . C 2 104.897 -52.201 15.008 0.85 107.9 ? H132 J22 1101 A 1 HETATM 47 H H131 J22 . . . C 2 104.235 -53.038 13.995 0.85 107.9 ? H131 J22 1101 A 1 HETATM 48 H H142 J22 . . . C 2 102.948 -51.06 14.712 0.85 94.61 ? H142 J22 1101 A 1 HETATM 49 H H141 J22 . . . C 2 102.877 -51.378 13.273 0.85 94.61 ? H141 J22 1101 A 1 HETATM 50 H H151 J22 . . . C 2 103.378 -49.14 13.216 0.85 94.38 ? H151 J22 1101 A 1 HETATM 51 H H152 J22 . . . C 2 104.672 -49.763 12.935 0.85 94.38 ? H152 J22 1101 A 1 HETATM 52 H H171 J22 . . . C 2 104.424 -47.3 15.981 0.85 102.66 ? H171 J22 1101 A 1 HETATM 53 H H181 J22 . . . C 2 104.651 -46.023 14.077 0.85 104.81 ? H181 J22 1101 A 1 HETATM 54 H H182 J22 . . . C 2 105.588 -47.041 13.408 0.85 104.81 ? H182 J22 1101 A 1 HETATM 55 H H201 J22 . . . C 2 107.038 -47.89 15.699 0.85 108.24 ? H201 J22 1101 A 1 HETATM 56 H H221 J22 . . . C 2 108.01 -47.487 17.963 0.85 100.9 ? H221 J22 1101 A 1 HETATM 57 H H231 J22 . . . C 2 107.838 -47.429 20.288 0.85 94.53 ? H231 J22 1101 A 1 HETATM 58 H H273 J22 . . . C 2 104.283 -46.178 20.811 0.85 81.9 ? H273 J22 1101 A 1 HETATM 59 H H272 J22 . . . C 2 103.678 -45.606 22.024 0.85 81.9 ? H272 J22 1101 A 1 HETATM 60 H H271 J22 . . . C 2 103.132 -46.844 21.442 0.85 81.9 ? H271 J22 1101 A 1 HETATM 61 H H292 J22 . . . C 2 103.556 -46.46 25.497 0.85 67.12 ? H292 J22 1101 A 1 HETATM 62 H H291 J22 . . . C 2 102.954 -46.225 24.176 0.85 67.12 ? H291 J22 1101 A 1 HETATM 63 H H293 J22 . . . C 2 104.025 -45.342 24.666 0.85 67.12 ? H293 J22 1101 A 1 HETATM 64 H H301 J22 . . . C 2 105.692 -47.895 25.674 0.85 68.12 ? H301 J22 1101 A 1 HETATM 65 H H311 J22 . . . C 2 107.273 -49.28 24.663 0.85 75.19 ? H311 J22 1101 A 1 HETATM 66 H H321 J22 . . . C 2 107.39 -49.41 22.331 0.85 84.42 ? H321 J22 1101 A 1 HETATM 67 H H331 J22 . . . C 2 104.101 -48.915 20.091 0.85 74.65 ? H331 J22 1101 A 1 HETATM 68 H H341 J22 . . . C 2 104.235 -48.989 17.754 0.85 87.53 ? H341 J22 1101 A 1 HETATM 69 H H191 J22 . . . C 2 107.192 -46.318 14.303 0.85 116.65 ? H191 J22 1101 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 69 #