data_6MQ3 # _model_server_result.job_id u7plRrWlo3z2L7vJg2eSeA _model_server_result.datetime_utc '2024-12-23 16:34:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1101}' # _entry.id 6MQ3 # _exptl.entry_id 6MQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 494.649 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "{(8R,9S,10S)-9-(2',3'-dimethyl[1,1'-biphenyl]-4-yl)-6-[(1-methyl-1H-imidazol-2-yl)sulfonyl]-1,6-diazabicyclo[6.2.0]decan-10-yl}methanol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MQ3 _cell.length_a 263.254 _cell.length_b 263.254 _cell.length_c 91.234 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C27 H34 N4 O3 S' _chem_comp.formula_weight 494.649 _chem_comp.id J22 _chem_comp.mon_nstd_flag . _chem_comp.name "{(8R,9S,10S)-9-(2',3'-dimethyl[1,1'-biphenyl]-4-yl)-6-[(1-methyl-1H-imidazol-2-yl)sulfonyl]-1,6-diazabicyclo[6.2.0]decan-10-yl}methanol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O35 S02 J22 doub 204 n n C06 C05 J22 doub 205 n y C06 N07 J22 sing 206 n y C05 N04 J22 sing 207 n y C08 N07 J22 sing 208 n n N07 C03 J22 sing 209 n y N04 C03 J22 doub 210 n y C03 S02 J22 sing 211 n n S02 O01 J22 doub 212 n n S02 N09 J22 sing 213 n n C13 C12 J22 sing 214 n n C13 C14 J22 sing 215 n n C12 N09 J22 sing 216 n n N09 C10 J22 sing 217 n n C14 C15 J22 sing 218 n n C10 C11 J22 sing 219 n n C15 N16 J22 sing 220 n n C11 N16 J22 sing 221 n n C11 C20 J22 sing 222 n n N16 C17 J22 sing 223 n n C34 C33 J22 doub 224 n y C34 C21 J22 sing 225 n y C33 C24 J22 sing 226 n y C20 C21 J22 sing 227 n n C20 C17 J22 sing 228 n n C32 C31 J22 doub 229 n y C32 C25 J22 sing 230 n y C21 C22 J22 doub 231 n y C31 C30 J22 sing 232 n y C17 C18 J22 sing 233 n n C24 C25 J22 sing 234 n n C24 C23 J22 doub 235 n y C25 C26 J22 doub 236 n y C22 C23 J22 sing 237 n y C30 C28 J22 doub 238 n y C18 O19 J22 sing 239 n n C26 C28 J22 sing 240 n y C26 C27 J22 sing 241 n n C28 C29 J22 sing 242 n n C05 H051 J22 sing 243 n n C06 H061 J22 sing 244 n n C08 H083 J22 sing 245 n n C08 H081 J22 sing 246 n n C08 H082 J22 sing 247 n n C10 H102 J22 sing 248 n n C10 H101 J22 sing 249 n n C11 H111 J22 sing 250 n n C12 H121 J22 sing 251 n n C12 H122 J22 sing 252 n n C13 H132 J22 sing 253 n n C13 H131 J22 sing 254 n n C14 H142 J22 sing 255 n n C14 H141 J22 sing 256 n n C15 H151 J22 sing 257 n n C15 H152 J22 sing 258 n n C17 H171 J22 sing 259 n n C18 H181 J22 sing 260 n n C18 H182 J22 sing 261 n n C20 H201 J22 sing 262 n n C22 H221 J22 sing 263 n n C23 H231 J22 sing 264 n n C27 H273 J22 sing 265 n n C27 H272 J22 sing 266 n n C27 H271 J22 sing 267 n n C29 H292 J22 sing 268 n n C29 H291 J22 sing 269 n n C29 H293 J22 sing 270 n n C30 H301 J22 sing 271 n n C31 H311 J22 sing 272 n n C32 H321 J22 sing 273 n n C33 H331 J22 sing 274 n n C34 H341 J22 sing 275 n n O19 H191 J22 sing 276 n n # _atom_sites.entry_id 6MQ3 _atom_sites.fract_transf_matrix[1][1] 0.003799 _atom_sites.fract_transf_matrix[1][2] 0.002193 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 J22 A 1 1101 1 J22 J22 . D 3 EPE A 1 1102 1102 EPE EPE . E 2 J22 B 1 1101 1 J22 J22 . F 3 EPE B 1 1102 1102 EPE EPE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C03 J22 . . . E 2 115.751 -4.739 -37.695 0.94 169.13 ? C03 J22 1101 B 1 HETATM 2 C C05 J22 . . . E 2 113.611 -4.232 -37.186 0.94 129.93 ? C05 J22 1101 B 1 HETATM 3 C C06 J22 . . . E 2 113.843 -5.57 -36.776 0.94 137.72 ? C06 J22 1101 B 1 HETATM 4 C C08 J22 . . . E 2 115.821 -7.156 -36.843 0.94 128.64 ? C08 J22 1101 B 1 HETATM 5 C C10 J22 . . . E 2 117.729 -3.093 -40.655 0.94 120.79 ? C10 J22 1101 B 1 HETATM 6 C C11 J22 . . . E 2 118.777 -2.103 -41.323 0.94 112.42 ? C11 J22 1101 B 1 HETATM 7 C C12 J22 . . . E 2 117.113 -1.858 -38.511 0.94 110.02 ? C12 J22 1101 B 1 HETATM 8 C C13 J22 . . . E 2 118.021 -0.601 -38.682 0.94 112.54 ? C13 J22 1101 B 1 HETATM 9 C C14 J22 . . . E 2 117.472 0.447 -39.698 0.94 111.19 ? C14 J22 1101 B 1 HETATM 10 C C15 J22 . . . E 2 117.054 -0.229 -41.044 0.94 113.38 ? C15 J22 1101 B 1 HETATM 11 C C17 J22 . . . E 2 118.722 -0.949 -43.193 0.94 84.38 ? C17 J22 1101 B 1 HETATM 12 C C18 J22 . . . E 2 117.639 -0.828 -44.316 0.94 89.23 ? C18 J22 1101 B 1 HETATM 13 C C20 J22 . . . E 2 119.13 -2.413 -42.814 0.94 97.03 ? C20 J22 1101 B 1 HETATM 14 C C21 J22 . . . E 2 120.599 -2.757 -43.142 0.94 83.8 ? C21 J22 1101 B 1 HETATM 15 C C22 J22 . . . E 2 120.907 -3.917 -43.887 0.94 93.32 ? C22 J22 1101 B 1 HETATM 16 C C23 J22 . . . E 2 122.252 -4.237 -44.199 0.94 92.66 ? C23 J22 1101 B 1 HETATM 17 C C24 J22 . . . E 2 123.332 -3.407 -43.786 0.94 75.73 ? C24 J22 1101 B 1 HETATM 18 C C25 J22 . . . E 2 124.702 -3.734 -44.106 0.94 86.26 ? C25 J22 1101 B 1 HETATM 19 C C26 J22 . . . E 2 125.39 -3.195 -45.24 0.94 78.14 ? C26 J22 1101 B 1 HETATM 20 C C27 J22 . . . E 2 124.636 -2.221 -46.156 0.94 73.12 ? C27 J22 1101 B 1 HETATM 21 C C28 J22 . . . E 2 126.739 -3.559 -45.499 0.94 71.98 ? C28 J22 1101 B 1 HETATM 22 C C29 J22 . . . E 2 127.483 -2.989 -46.704 0.94 68.23 ? C29 J22 1101 B 1 HETATM 23 C C30 J22 . . . E 2 127.4 -4.464 -44.625 0.94 70.85 ? C30 J22 1101 B 1 HETATM 24 C C31 J22 . . . E 2 126.734 -5.012 -43.494 0.94 78.02 ? C31 J22 1101 B 1 HETATM 25 C C32 J22 . . . E 2 125.391 -4.642 -43.246 0.94 93.5 ? C32 J22 1101 B 1 HETATM 26 C C33 J22 . . . E 2 123.001 -2.235 -43.042 0.94 74.75 ? C33 J22 1101 B 1 HETATM 27 C C34 J22 . . . E 2 121.656 -1.914 -42.728 0.94 80.29 ? C34 J22 1101 B 1 HETATM 28 N N04 J22 . . . E 2 114.81 -3.753 -37.749 0.94 154.58 ? N04 J22 1101 B 1 HETATM 29 N N07 J22 . . . E 2 115.161 -5.843 -37.105 0.94 161.62 ? N07 J22 1101 B 1 HETATM 30 N N09 J22 . . . E 2 117.676 -3.128 -39.128 0.94 115.19 ? N09 J22 1101 B 1 HETATM 31 N N16 J22 . . . E 2 118.267 -0.718 -41.778 0.94 105.16 ? N16 J22 1101 B 1 HETATM 32 O O01 J22 . . . E 2 117.821 -5.714 -39.179 0.94 150.83 ? O01 J22 1101 B 1 HETATM 33 O O19 J22 . . . E 2 117.276 -2.193 -44.733 0.94 75.28 ? O19 J22 1101 B 1 HETATM 34 O O35 J22 . . . E 2 118.394 -4.716 -37.203 0.94 153.42 ? O35 J22 1101 B 1 HETATM 35 S S02 J22 . . . E 2 117.494 -4.579 -38.321 0.94 153.71 ? S02 J22 1101 B 1 HETATM 36 H H051 J22 . . . E 2 112.834 -3.728 -37.116 0.94 156.08 ? H051 J22 1101 B 1 HETATM 37 H H061 J22 . . . E 2 113.228 -6.136 -36.371 0.94 165.44 ? H061 J22 1101 B 1 HETATM 38 H H083 J22 . . . E 2 115.236 -7.813 -36.517 0.94 154.54 ? H083 J22 1101 B 1 HETATM 39 H H081 J22 . . . E 2 116.519 -7.067 -36.221 0.94 154.54 ? H081 J22 1101 B 1 HETATM 40 H H082 J22 . . . E 2 116.207 -7.497 -37.628 0.94 154.54 ? H082 J22 1101 B 1 HETATM 41 H H102 J22 . . . E 2 116.893 -2.919 -41.045 0.94 145.12 ? H102 J22 1101 B 1 HETATM 42 H H101 J22 . . . E 2 117.916 -3.95 -40.99 0.94 145.12 ? H101 J22 1101 B 1 HETATM 43 H H111 J22 . . . E 2 119.548 -1.994 -40.8 0.94 135.08 ? H111 J22 1101 B 1 HETATM 44 H H121 J22 . . . E 2 116.273 -1.626 -38.86 0.94 132.19 ? H121 J22 1101 B 1 HETATM 45 H H122 J22 . . . E 2 116.93 -2.007 -37.603 0.94 132.19 ? H122 J22 1101 B 1 HETATM 46 H H132 J22 . . . E 2 118.882 -0.876 -38.938 0.94 135.21 ? H132 J22 1101 B 1 HETATM 47 H H131 J22 . . . E 2 118.16 -0.186 -37.851 0.94 135.21 ? H131 J22 1101 B 1 HETATM 48 H H142 J22 . . . E 2 118.117 1.109 -39.864 0.94 133.6 ? H142 J22 1101 B 1 HETATM 49 H H141 J22 . . . E 2 116.756 0.917 -39.313 0.94 133.6 ? H141 J22 1101 B 1 HETATM 50 H H151 J22 . . . E 2 116.542 0.367 -41.558 0.94 136.22 ? H151 J22 1101 B 1 HETATM 51 H H152 J22 . . . E 2 116.434 -0.902 -40.833 0.94 136.22 ? H152 J22 1101 B 1 HETATM 52 H H171 J22 . . . E 2 119.501 -0.465 -43.394 0.94 101.43 ? H171 J22 1101 B 1 HETATM 53 H H181 J22 . . . E 2 117.967 -0.336 -45.045 0.94 107.25 ? H181 J22 1101 B 1 HETATM 54 H H182 J22 . . . E 2 116.845 -0.435 -44.004 0.94 107.25 ? H182 J22 1101 B 1 HETATM 55 H H201 J22 . . . E 2 118.509 -3.021 -43.17 0.94 116.61 ? H201 J22 1101 B 1 HETATM 56 H H221 J22 . . . E 2 120.236 -4.491 -44.177 0.94 112.15 ? H221 J22 1101 B 1 HETATM 57 H H231 J22 . . . E 2 122.455 -5.003 -44.684 0.94 111.36 ? H231 J22 1101 B 1 HETATM 58 H H273 J22 . . . E 2 123.707 -2.351 -46.211 0.94 87.91 ? H273 J22 1101 B 1 HETATM 59 H H272 J22 . . . E 2 124.908 -2.243 -47.054 0.94 87.91 ? H272 J22 1101 B 1 HETATM 60 H H271 J22 . . . E 2 124.712 -1.312 -45.93 0.94 87.91 ? H271 J22 1101 B 1 HETATM 61 H H292 J22 . . . E 2 128.42 -2.998 -46.651 0.94 82.05 ? H292 J22 1101 B 1 HETATM 62 H H291 J22 . . . E 2 127.29 -2.089 -46.89 0.94 82.05 ? H291 J22 1101 B 1 HETATM 63 H H293 J22 . . . E 2 127.312 -3.42 -47.521 0.94 82.05 ? H293 J22 1101 B 1 HETATM 64 H H301 J22 . . . E 2 128.281 -4.723 -44.765 0.94 85.19 ? H301 J22 1101 B 1 HETATM 65 H H311 J22 . . . E 2 127.161 -5.603 -42.92 0.94 93.79 ? H311 J22 1101 B 1 HETATM 66 H H321 J22 . . . E 2 124.947 -4.994 -42.51 0.94 112.37 ? H321 J22 1101 B 1 HETATM 67 H H331 J22 . . . E 2 123.703 -1.692 -42.77 0.94 89.87 ? H331 J22 1101 B 1 HETATM 68 H H341 J22 . . . E 2 121.491 -1.141 -42.24 0.94 96.52 ? H341 J22 1101 B 1 HETATM 69 H H191 J22 . . . E 2 116.782 -2.472 -44.125 0.94 90.5 ? H191 J22 1101 B 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 69 #