data_6MQ3 # _model_server_result.job_id RJEmCIyUd1pdbJ6rLc3NkA _model_server_result.datetime_utc '2024-12-23 16:30:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1102}' # _entry.id 6MQ3 # _exptl.entry_id 6MQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MQ3 _cell.length_a 263.254 _cell.length_b 263.254 _cell.length_c 91.234 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 6MQ3 _atom_sites.fract_transf_matrix[1][1] 0.003799 _atom_sites.fract_transf_matrix[1][2] 0.002193 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 J22 A 1 1101 1 J22 J22 . D 3 EPE A 1 1102 1102 EPE EPE . E 2 J22 B 1 1101 1 J22 J22 . F 3 EPE B 1 1102 1102 EPE EPE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . D 3 96.387 -56.096 -17.813 0.84 70.75 ? N1 EPE 1102 A 1 HETATM 2 C C2 EPE . . . D 3 96.358 -56.447 -19.24 0.84 60.85 ? C2 EPE 1102 A 1 HETATM 3 C C3 EPE . . . D 3 97.69 -56.055 -19.858 0.84 67.66 ? C3 EPE 1102 A 1 HETATM 4 N N4 EPE . . . D 3 98.015 -54.664 -19.604 0.84 80.61 ? N4 EPE 1102 A 1 HETATM 5 C C5 EPE . . . D 3 97.734 -54.104 -18.291 0.84 84.81 ? C5 EPE 1102 A 1 HETATM 6 C C6 EPE . . . D 3 96.446 -54.634 -17.679 0.84 72.74 ? C6 EPE 1102 A 1 HETATM 7 C C7 EPE . . . D 3 99.013 -54.05 -20.464 0.84 88.6 ? C7 EPE 1102 A 1 HETATM 8 C C8 EPE . . . D 3 99.993 -53.139 -19.729 0.84 76.68 ? C8 EPE 1102 A 1 HETATM 9 O O8 EPE . . . D 3 99.401 -51.881 -19.485 0.84 73.59 ? O8 EPE 1102 A 1 HETATM 10 C C9 EPE . . . D 3 95.255 -56.631 -17.03 0.84 75.38 ? C9 EPE 1102 A 1 HETATM 11 C C10 EPE . . . D 3 93.992 -56.837 -17.863 0.84 67.87 ? C10 EPE 1102 A 1 HETATM 12 S S EPE . . . D 3 92.585 -57.282 -16.821 0.84 75.81 ? S EPE 1102 A 1 HETATM 13 O O1S EPE . . . D 3 92.502 -58.737 -16.718 0.84 79.09 ? O1S EPE 1102 A 1 HETATM 14 O O2S EPE . . . D 3 91.354 -56.76 -17.407 0.84 86.99 ? O2S EPE 1102 A 1 HETATM 15 O O3S EPE . . . D 3 92.773 -56.712 -15.491 0.84 70.46 ? O3S EPE 1102 A 1 HETATM 16 H H21 EPE . . . D 3 96.193 -57.518 -19.357 0.84 73.18 ? H21 EPE 1102 A 1 HETATM 17 H H22 EPE . . . D 3 95.546 -55.917 -19.738 0.84 73.18 ? H22 EPE 1102 A 1 HETATM 18 H H31 EPE . . . D 3 97.652 -56.225 -20.934 0.84 81.37 ? H31 EPE 1102 A 1 HETATM 19 H H32 EPE . . . D 3 98.477 -56.689 -19.45 0.84 81.37 ? H32 EPE 1102 A 1 HETATM 20 H H51 EPE . . . D 3 97.668 -53.02 -18.374 0.84 101.94 ? H51 EPE 1102 A 1 HETATM 21 H H52 EPE . . . D 3 98.565 -54.331 -17.623 0.84 101.94 ? H52 EPE 1102 A 1 HETATM 22 H H61 EPE . . . D 3 96.402 -54.361 -16.625 0.84 87.45 ? H61 EPE 1102 A 1 HETATM 23 H H62 EPE . . . D 3 95.589 -54.185 -18.181 0.84 87.45 ? H62 EPE 1102 A 1 HETATM 24 H H71 EPE . . . D 3 99.575 -54.837 -20.968 0.84 106.49 ? H71 EPE 1102 A 1 HETATM 25 H H72 EPE . . . D 3 98.505 -53.471 -21.235 0.84 106.49 ? H72 EPE 1102 A 1 HETATM 26 H H81 EPE . . . D 3 100.28 -53.598 -18.783 0.84 92.18 ? H81 EPE 1102 A 1 HETATM 27 H H82 EPE . . . D 3 100.893 -53.01 -20.33 0.84 92.18 ? H82 EPE 1102 A 1 HETATM 28 H HO8 EPE . . . D 3 98.489 -51.873 -19.843 0.84 88.48 ? HO8 EPE 1102 A 1 HETATM 29 H H91 EPE . . . D 3 95.548 -57.583 -16.588 0.84 90.62 ? H91 EPE 1102 A 1 HETATM 30 H H92 EPE . . . D 3 95.033 -55.945 -16.213 0.84 90.62 ? H92 EPE 1102 A 1 HETATM 31 H H101 EPE . . . D 3 93.764 -55.921 -18.408 0.84 81.62 ? H101 EPE 1102 A 1 HETATM 32 H H102 EPE . . . D 3 94.166 -57.626 -18.594 0.84 81.62 ? H102 EPE 1102 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #