data_6MSK
#
_model_server_result.job_id            aJrDcVUhK5ZGyzJkZ6dG2w 
_model_server_result.datetime_utc      '2024-10-18 16:26:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6msk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AB","auth_seq_id":501}' 
#
_entry.id    6MSK 
#
_exptl.entry_id    6MSK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          35 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    47-meric 
_pdbx_struct_assembly.oligomeric_count      47 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 35 WA N N 
? 35 YA N N 
? 35 AB N N 
? 35 EB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 633 U CYS 633 1_555 A SG CYS 659 U CYS 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 M SG CYS 236 A CYS 236 1_555 M SG CYS 270 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 Z SG CYS 41 M CYS 41 1_555 Z SG CYS 186 M CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf4 NA SG CYS 41 m CYS 41 1_555 NA SG CYS 186 m CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc1 I NE2 HIS 112 c HIS 113 1_555 VA ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc2 I NE2 HIS 114 c HIS 115 1_555 VA ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? 
metalc ? metalc3 I OD1 ASP 125 c ASP 126 1_555 VA ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc4 I OD2 ASP 125 c ASP 126 1_555 VA ZN ZN . c ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc5 M OG1 THR 223 A THR 223 1_555 XA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.749 ? 
metalc ? metalc6 N OG1 THR 233 B THR 233 1_555 ZA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? 
metalc ? metalc7 O OG1 THR 189 C THR 197 1_555 BB MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc8 P OG1 THR 213 D THR 213 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? 
metalc ? metalc9 R OG1 THR 234 F THR 234 1_555 FB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? 
metalc ? metalc10 WA O2G ATP . A ATP 501 1_555 XA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.847 ? 
metalc ? metalc11 WA O1B ATP . A ATP 501 1_555 XA MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc12 YA O2G ATP . B ATP 501 1_555 ZA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc13 YA O2B ATP . B ATP 501 1_555 ZA MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
metalc ? metalc14 AB O3B ATP . C ATP 501 1_555 BB MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? 
metalc ? metalc15 CB O1B ADP . D ADP 501 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc16 CB O1A ADP . D ADP 501 1_555 DB MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? 
metalc ? metalc17 EB O3G ATP . F ATP 501 1_555 FB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc18 EB O2B ATP . F ATP 501 1_555 FB MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6MSK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
VA 34 ZN c 1 401 401 ZN ZN . 
WA 35 ATP A 1 501 434 ATP ATP . 
XA 36 MG A 1 502 435 MG MG . 
YA 35 ATP B 1 501 441 ATP ATP . 
ZA 36 MG B 1 502 442 MG MG . 
AB 35 ATP C 1 501 407 ATP ATP . 
BB 36 MG C 1 502 408 MG MG . 
CB 37 ADP D 1 501 419 ADP ADP . 
DB 36 MG D 1 502 420 MG MG . 
EB 35 ATP F 1 501 440 ATP ATP . 
FB 36 MG F 1 502 441 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . AB 35 243.89 190.314 191.262 1 162.17 ? PG ATP 501 C 1 
HETATM 2 O O1G ATP . . . AB 35 242.537 189.878 190.762 1 162.17 ? O1G ATP 501 C 1 
HETATM 3 O O2G ATP . . . AB 35 244.151 191.794 191.192 1 162.17 ? O2G ATP 501 C 1 
HETATM 4 O O3G ATP . . . AB 35 244.33 189.684 192.561 1 162.17 ? O3G ATP 501 C 1 
HETATM 5 P PB ATP . . . AB 35 244.57 188.195 189.69 1 162.17 ? PB ATP 501 C 1 
HETATM 6 O O1B ATP . . . AB 35 243.709 188.248 188.46 1 162.17 ? O1B ATP 501 C 1 
HETATM 7 O O2B ATP . . . AB 35 244.111 187.4 190.875 1 162.17 ? O2B ATP 501 C 1 
HETATM 8 O O3B ATP . . . AB 35 244.88 189.688 190.172 1 162.17 ? O3B ATP 501 C 1 
HETATM 9 P PA ATP . . . AB 35 246.149 186.117 188.896 1 162.17 ? PA ATP 501 C 1 
HETATM 10 O O1A ATP . . . AB 35 247.192 186.017 187.815 1 162.17 ? O1A ATP 501 C 1 
HETATM 11 O O2A ATP . . . AB 35 244.771 185.542 188.691 1 162.17 ? O2A ATP 501 C 1 
HETATM 12 O O3A ATP . . . AB 35 246.022 187.657 189.307 1 162.17 ? O3A ATP 501 C 1 
HETATM 13 O O5' ATP . . . AB 35 246.726 185.453 190.238 1 162.17 ? O5' ATP 501 C 1 
HETATM 14 C C5' ATP . . . AB 35 247.791 184.52 190.129 1 162.17 ? C5' ATP 501 C 1 
HETATM 15 C C4' ATP . . . AB 35 247.621 183.343 191.074 1 162.17 ? C4' ATP 501 C 1 
HETATM 16 O O4' ATP . . . AB 35 246.471 182.585 190.691 1 162.17 ? O4' ATP 501 C 1 
HETATM 17 C C3' ATP . . . AB 35 248.814 182.428 190.91 1 162.17 ? C3' ATP 501 C 1 
HETATM 18 O O3' ATP . . . AB 35 249.121 181.798 192.152 1 162.17 ? O3' ATP 501 C 1 
HETATM 19 C C2' ATP . . . AB 35 248.317 181.387 189.943 1 162.17 ? C2' ATP 501 C 1 
HETATM 20 O O2' ATP . . . AB 35 248.992 180.14 190.092 1 162.17 ? O2' ATP 501 C 1 
HETATM 21 C C1' ATP . . . AB 35 246.836 181.277 190.243 1 162.17 ? C1' ATP 501 C 1 
HETATM 22 N N9 ATP . . . AB 35 246.053 180.948 189.027 1 162.17 ? N9 ATP 501 C 1 
HETATM 23 C C8 ATP . . . AB 35 244.982 181.644 188.612 1 162.17 ? C8 ATP 501 C 1 
HETATM 24 N N7 ATP . . . AB 35 244.454 181.117 187.483 1 162.17 ? N7 ATP 501 C 1 
HETATM 25 C C5 ATP . . . AB 35 245.194 180.049 187.158 1 162.17 ? C5 ATP 501 C 1 
HETATM 26 C C6 ATP . . . AB 35 245.176 179.043 186.077 1 162.17 ? C6 ATP 501 C 1 
HETATM 27 N N6 ATP . . . AB 35 244.24 179.079 185.101 1 162.17 ? N6 ATP 501 C 1 
HETATM 28 N N1 ATP . . . AB 35 246.121 178.085 186.098 1 162.17 ? N1 ATP 501 C 1 
HETATM 29 C C2 ATP . . . AB 35 247.058 178.034 187.056 1 162.17 ? C2 ATP 501 C 1 
HETATM 30 N N3 ATP . . . AB 35 247.129 178.913 188.065 1 162.17 ? N3 ATP 501 C 1 
HETATM 31 C C4 ATP . . . AB 35 246.244 179.931 188.179 1 162.17 ? C4 ATP 501 C 1 
#
_model_server_stats.io_time_ms              188 
_model_server_stats.parse_time_ms           103 
_model_server_stats.create_model_time_ms    137 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#