data_6MSM
#
_model_server_result.job_id            1nitN-GYJd3vOWV057RQZg 
_model_server_result.datetime_utc      '2024-12-21 15:58:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6msm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1505}' 
#
_entry.id    6MSM 
#
_exptl.entry_id    6MSM 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MSM 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MSM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 465 A THR 465 1_555 C MG MG . A MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc2 A OE1 GLN 493 A GLN 493 1_555 C MG MG . A MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? 
metalc ? metalc3 A OG SER 1251 A SER 1251 1_555 D MG MG . A MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc4 A OE1 GLN 1291 A GLN 1291 1_555 D MG MG . A MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? 
metalc ? metalc5 C MG MG . A MG 1501 1_555 E O3G ATP . A ATP 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? 
metalc ? metalc6 C MG MG . A MG 1501 1_555 E O2B ATP . A ATP 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc7 D MG MG . A MG 1502 1_555 F O3G ATP . A ATP 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc8 D MG MG . A MG 1502 1_555 F O2B ATP . A ATP 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 384 n n 
N C13 POV sing 385 n n 
N C14 POV sing 386 n n 
N C15 POV sing 387 n n 
P O11 POV sing 388 n n 
P O12 POV sing 389 n n 
P O13 POV sing 390 n n 
P O14 POV doub 391 n n 
C1 C2 POV sing 392 n n 
C1 O11 POV sing 393 n n 
C1 H1 POV sing 394 n n 
C1 H1A POV sing 395 n n 
C2 C3 POV sing 396 n n 
C2 O21 POV sing 397 n n 
C2 H2 POV sing 398 n n 
C3 O31 POV sing 399 n n 
C3 H3 POV sing 400 n n 
C3 H3A POV sing 401 n n 
C210 C211 POV sing 402 n n 
C210 C29 POV doub 403 z n 
C210 H210 POV sing 404 n n 
C310 C311 POV sing 405 n n 
C310 C39 POV sing 406 n n 
C310 H310 POV sing 407 n n 
C310 H31A POV sing 408 n n 
C11 C12 POV sing 409 n n 
C11 O12 POV sing 410 n n 
C11 H11 POV sing 411 n n 
C11 H11A POV sing 412 n n 
C211 C212 POV sing 413 n n 
C211 H211 POV sing 414 n n 
C211 H21A POV sing 415 n n 
C311 C312 POV sing 416 n n 
C311 H311 POV sing 417 n n 
C311 H31B POV sing 418 n n 
C12 H12 POV sing 419 n n 
C12 H12A POV sing 420 n n 
C212 C213 POV sing 421 n n 
C212 H212 POV sing 422 n n 
C212 H21B POV sing 423 n n 
C312 C313 POV sing 424 n n 
C312 H312 POV sing 425 n n 
C312 H31C POV sing 426 n n 
C13 H13 POV sing 427 n n 
C13 H13A POV sing 428 n n 
C13 H13B POV sing 429 n n 
C213 C214 POV sing 430 n n 
C213 H213 POV sing 431 n n 
C213 H21C POV sing 432 n n 
C313 C314 POV sing 433 n n 
C313 H313 POV sing 434 n n 
C313 H31D POV sing 435 n n 
C14 H14 POV sing 436 n n 
C14 H14A POV sing 437 n n 
C14 H14B POV sing 438 n n 
C214 C215 POV sing 439 n n 
C214 H214 POV sing 440 n n 
C214 H21D POV sing 441 n n 
C314 C315 POV sing 442 n n 
C314 H314 POV sing 443 n n 
C314 H31E POV sing 444 n n 
C15 H15 POV sing 445 n n 
C15 H15A POV sing 446 n n 
C15 H15B POV sing 447 n n 
C215 C216 POV sing 448 n n 
C215 H215 POV sing 449 n n 
C215 H21E POV sing 450 n n 
C315 C316 POV sing 451 n n 
C315 H315 POV sing 452 n n 
C315 H31F POV sing 453 n n 
C216 C217 POV sing 454 n n 
C216 H216 POV sing 455 n n 
C216 H21F POV sing 456 n n 
C316 H316 POV sing 457 n n 
C316 H31G POV sing 458 n n 
C316 H31H POV sing 459 n n 
C217 C218 POV sing 460 n n 
C217 H217 POV sing 461 n n 
C217 H21G POV sing 462 n n 
C218 H218 POV sing 463 n n 
C218 H21H POV sing 464 n n 
C218 H21J POV sing 465 n n 
C21 O21 POV sing 466 n n 
C21 C22 POV sing 467 n n 
C21 O22 POV doub 468 n n 
C22 C23 POV sing 469 n n 
C22 H22 POV sing 470 n n 
C22 H22A POV sing 471 n n 
C23 C24 POV sing 472 n n 
C23 H23 POV sing 473 n n 
C23 H23A POV sing 474 n n 
C24 C25 POV sing 475 n n 
C24 H24 POV sing 476 n n 
C24 H24A POV sing 477 n n 
C25 C26 POV sing 478 n n 
C25 H25 POV sing 479 n n 
C25 H25A POV sing 480 n n 
C26 C27 POV sing 481 n n 
C26 H26 POV sing 482 n n 
C26 H26A POV sing 483 n n 
C27 C28 POV sing 484 n n 
C27 H27 POV sing 485 n n 
C27 H27A POV sing 486 n n 
C28 C29 POV sing 487 n n 
C28 H28 POV sing 488 n n 
C28 H28A POV sing 489 n n 
C29 H29 POV sing 490 n n 
C31 O31 POV sing 491 n n 
C31 C32 POV sing 492 n n 
C31 O32 POV doub 493 n n 
C32 C33 POV sing 494 n n 
C32 H32 POV sing 495 n n 
C32 H32A POV sing 496 n n 
C33 C34 POV sing 497 n n 
C33 H33 POV sing 498 n n 
C33 H33A POV sing 499 n n 
C34 C35 POV sing 500 n n 
C34 H34 POV sing 501 n n 
C34 H34A POV sing 502 n n 
C35 C36 POV sing 503 n n 
C35 H35 POV sing 504 n n 
C35 H35A POV sing 505 n n 
C36 C37 POV sing 506 n n 
C36 H36 POV sing 507 n n 
C36 H36A POV sing 508 n n 
C37 C38 POV sing 509 n n 
C37 H37 POV sing 510 n n 
C37 H37A POV sing 511 n n 
C38 C39 POV sing 512 n n 
C38 H38 POV sing 513 n n 
C38 H38A POV sing 514 n n 
C39 H39 POV sing 515 n n 
C39 H39A POV sing 516 n n 
#
_atom_sites.entry_id                     6MSM 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG A 1 1501 1 MG MG . 
D 3 MG A 1 1502 2 MG MG . 
E 4 ATP A 1 1503 1 ATP ATP . 
F 4 ATP A 1 1504 2 ATP ATP . 
G 5 POV A 1 1505 1 POV POV . 
H 5 POV A 1 1506 2 POV POV . 
I 5 POV A 1 1507 3 POV POV . 
J 5 POV A 1 1508 4 POV POV . 
K 5 POV A 1 1509 5 POV POV . 
L 6 CLR A 1 1510 6 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C310 POV . . . G 5 163.96 171.711 174.918 1 79.16 ? C310 POV 1505 A 1 
HETATM 2 C C311 POV . . . G 5 163.299 172.457 173.753 1 79.87 ? C311 POV 1505 A 1 
HETATM 3 C C32 POV . . . G 5 164.008 167.361 183.503 1 36.86 ? C32 POV 1505 A 1 
HETATM 4 C C33 POV . . . G 5 163.328 168.479 182.708 1 40.7 ? C33 POV 1505 A 1 
HETATM 5 C C34 POV . . . G 5 163.508 168.277 181.195 1 43.96 ? C34 POV 1505 A 1 
HETATM 6 C C35 POV . . . G 5 163.227 169.6 180.462 1 54.83 ? C35 POV 1505 A 1 
HETATM 7 C C36 POV . . . G 5 162.555 169.322 179.11 1 65.58 ? C36 POV 1505 A 1 
HETATM 8 C C37 POV . . . G 5 162.419 170.643 178.324 1 70.8 ? C37 POV 1505 A 1 
HETATM 9 C C38 POV . . . G 5 163.528 170.833 177.263 1 70.93 ? C38 POV 1505 A 1 
HETATM 10 C C39 POV . . . G 5 162.894 171.287 175.934 1 76.17 ? C39 POV 1505 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           10 
#