data_6MSY # _model_server_result.job_id iEGy0eBTz6OBlR9Ya-_QpQ _model_server_result.datetime_utc '2025-01-02 22:52:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6msy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":308}' # _entry.id 6MSY # _exptl.entry_id 6MSY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MSY _cell.length_a 144.646 _cell.length_b 148.319 _cell.length_c 54.604 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MSY _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 54.604 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 MAN MAN C1 O1 . O3 HO3 . sing 2 ? 3 3 2 MAN MAN C1 O1 . O2 HO2 . sing 3 ? 3 4 3 MAN MAN C1 O1 . O2 HO2 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C MAN 1 A 1 MAN A 232 MAN 3 n C MAN 2 A 2 MAN A 231 MAN 3 n C MAN 3 A 3 MAN A 230 MAN 3 n C MAN 4 A 4 MAN A 229 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.136 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.058 ? disulf ? disulf5 B SG CYS 150 H CYS 142 1_555 B SG CYS 206 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? covale ? covale1 C O3 MAN . A MAN 1 1_555 C C1 MAN . A MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale2 C O2 MAN . A MAN 2 1_555 C C1 MAN . A MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale3 C O2 MAN . A MAN 3 1_555 C C1 MAN . A MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6MSY _atom_sites.fract_transf_matrix[1][1] 0.006913 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006742 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 UNX L 1 301 1 UNX UNX . E 4 UNX H 1 301 2 UNX UNX . F 4 UNX H 1 302 3 UNX UNX . G 4 UNX H 1 303 4 UNX UNX . H 5 ACT H 1 308 301 ACT ACT . I 6 HOH L 1 401 367 HOH HOH . I 6 HOH L 2 402 13 HOH HOH . I 6 HOH L 3 403 389 HOH HOH . I 6 HOH L 4 404 402 HOH HOH . I 6 HOH L 5 405 233 HOH HOH . I 6 HOH L 6 406 388 HOH HOH . I 6 HOH L 7 407 3 HOH HOH . I 6 HOH L 8 408 139 HOH HOH . I 6 HOH L 9 409 390 HOH HOH . I 6 HOH L 10 410 405 HOH HOH . I 6 HOH L 11 411 4 HOH HOH . I 6 HOH L 12 412 31 HOH HOH . I 6 HOH L 13 413 16 HOH HOH . I 6 HOH L 14 414 35 HOH HOH . I 6 HOH L 15 415 398 HOH HOH . I 6 HOH L 16 416 163 HOH HOH . I 6 HOH L 17 417 19 HOH HOH . I 6 HOH L 18 418 374 HOH HOH . I 6 HOH L 19 419 132 HOH HOH . I 6 HOH L 20 420 172 HOH HOH . I 6 HOH L 21 421 108 HOH HOH . I 6 HOH L 22 422 17 HOH HOH . I 6 HOH L 23 423 20 HOH HOH . I 6 HOH L 24 424 153 HOH HOH . I 6 HOH L 25 425 30 HOH HOH . I 6 HOH L 26 426 155 HOH HOH . I 6 HOH L 27 427 371 HOH HOH . I 6 HOH L 28 428 251 HOH HOH . I 6 HOH L 29 429 154 HOH HOH . I 6 HOH L 30 430 14 HOH HOH . I 6 HOH L 31 431 7 HOH HOH . I 6 HOH L 32 432 12 HOH HOH . I 6 HOH L 33 433 107 HOH HOH . I 6 HOH L 34 434 45 HOH HOH . I 6 HOH L 35 435 46 HOH HOH . I 6 HOH L 36 436 25 HOH HOH . I 6 HOH L 37 437 381 HOH HOH . I 6 HOH L 38 438 28 HOH HOH . I 6 HOH L 39 439 11 HOH HOH . I 6 HOH L 40 440 27 HOH HOH . I 6 HOH L 41 441 2 HOH HOH . I 6 HOH L 42 442 8 HOH HOH . I 6 HOH L 43 443 175 HOH HOH . I 6 HOH L 44 444 5 HOH HOH . I 6 HOH L 45 445 40 HOH HOH . I 6 HOH L 46 446 10 HOH HOH . I 6 HOH L 47 447 196 HOH HOH . I 6 HOH L 48 448 24 HOH HOH . I 6 HOH L 49 449 138 HOH HOH . I 6 HOH L 50 450 18 HOH HOH . I 6 HOH L 51 451 26 HOH HOH . I 6 HOH L 52 452 195 HOH HOH . I 6 HOH L 53 453 33 HOH HOH . I 6 HOH L 54 454 22 HOH HOH . I 6 HOH L 55 455 103 HOH HOH . I 6 HOH L 56 456 394 HOH HOH . I 6 HOH L 57 457 9 HOH HOH . I 6 HOH L 58 458 164 HOH HOH . I 6 HOH L 59 459 104 HOH HOH . I 6 HOH L 60 460 1 HOH HOH . I 6 HOH L 61 461 181 HOH HOH . I 6 HOH L 62 462 137 HOH HOH . I 6 HOH L 63 463 300 HOH HOH . I 6 HOH L 64 464 362 HOH HOH . I 6 HOH L 65 465 29 HOH HOH . I 6 HOH L 66 466 359 HOH HOH . I 6 HOH L 67 467 190 HOH HOH . I 6 HOH L 68 468 361 HOH HOH . I 6 HOH L 69 469 134 HOH HOH . I 6 HOH L 70 470 397 HOH HOH . I 6 HOH L 71 471 351 HOH HOH . I 6 HOH L 72 472 403 HOH HOH . J 6 HOH H 1 401 68 HOH HOH . J 6 HOH H 2 402 106 HOH HOH . J 6 HOH H 3 403 191 HOH HOH . J 6 HOH H 4 404 100 HOH HOH . J 6 HOH H 5 405 188 HOH HOH . J 6 HOH H 6 406 159 HOH HOH . J 6 HOH H 7 407 69 HOH HOH . J 6 HOH H 8 408 395 HOH HOH . J 6 HOH H 9 409 392 HOH HOH . J 6 HOH H 10 410 49 HOH HOH . J 6 HOH H 11 411 60 HOH HOH . J 6 HOH H 12 412 125 HOH HOH . J 6 HOH H 13 413 70 HOH HOH . J 6 HOH H 14 414 102 HOH HOH . J 6 HOH H 15 415 55 HOH HOH . J 6 HOH H 16 416 156 HOH HOH . J 6 HOH H 17 417 182 HOH HOH . J 6 HOH H 18 418 93 HOH HOH . J 6 HOH H 19 419 58 HOH HOH . J 6 HOH H 20 420 87 HOH HOH . J 6 HOH H 21 421 399 HOH HOH . J 6 HOH H 22 422 50 HOH HOH . J 6 HOH H 23 423 76 HOH HOH . J 6 HOH H 24 424 61 HOH HOH . J 6 HOH H 25 425 51 HOH HOH . J 6 HOH H 26 426 83 HOH HOH . J 6 HOH H 27 427 57 HOH HOH . J 6 HOH H 28 428 143 HOH HOH . J 6 HOH H 29 429 99 HOH HOH . J 6 HOH H 30 430 73 HOH HOH . J 6 HOH H 31 431 56 HOH HOH . J 6 HOH H 32 432 145 HOH HOH . J 6 HOH H 33 433 401 HOH HOH . J 6 HOH H 34 434 65 HOH HOH . J 6 HOH H 35 435 59 HOH HOH . J 6 HOH H 36 436 53 HOH HOH . J 6 HOH H 37 437 82 HOH HOH . J 6 HOH H 38 438 290 HOH HOH . J 6 HOH H 39 439 75 HOH HOH . J 6 HOH H 40 440 66 HOH HOH . J 6 HOH H 41 441 84 HOH HOH . J 6 HOH H 42 442 148 HOH HOH . J 6 HOH H 43 443 94 HOH HOH . J 6 HOH H 44 444 91 HOH HOH . J 6 HOH H 45 445 89 HOH HOH . J 6 HOH H 46 446 105 HOH HOH . J 6 HOH H 47 447 109 HOH HOH . J 6 HOH H 48 448 96 HOH HOH . J 6 HOH H 49 449 185 HOH HOH . J 6 HOH H 50 450 71 HOH HOH . J 6 HOH H 51 451 400 HOH HOH . J 6 HOH H 52 452 54 HOH HOH . J 6 HOH H 53 453 86 HOH HOH . J 6 HOH H 54 454 232 HOH HOH . J 6 HOH H 55 455 85 HOH HOH . J 6 HOH H 56 456 72 HOH HOH . J 6 HOH H 57 457 62 HOH HOH . J 6 HOH H 58 458 146 HOH HOH . J 6 HOH H 59 459 204 HOH HOH . J 6 HOH H 60 460 391 HOH HOH . J 6 HOH H 61 461 123 HOH HOH . J 6 HOH H 62 462 170 HOH HOH . J 6 HOH H 63 463 376 HOH HOH . J 6 HOH H 64 464 364 HOH HOH . J 6 HOH H 65 465 189 HOH HOH . J 6 HOH H 66 466 128 HOH HOH . J 6 HOH H 67 467 378 HOH HOH . J 6 HOH H 68 468 396 HOH HOH . J 6 HOH H 69 469 365 HOH HOH . J 6 HOH H 70 470 142 HOH HOH . J 6 HOH H 71 471 355 HOH HOH . J 6 HOH H 72 472 166 HOH HOH . J 6 HOH H 73 473 404 HOH HOH . J 6 HOH H 74 474 117 HOH HOH . J 6 HOH H 75 475 226 HOH HOH . J 6 HOH H 76 476 131 HOH HOH . J 6 HOH H 77 477 225 HOH HOH . J 6 HOH H 78 478 277 HOH HOH . J 6 HOH H 79 479 124 HOH HOH . J 6 HOH H 80 480 101 HOH HOH . J 6 HOH H 81 481 377 HOH HOH . J 6 HOH H 82 482 386 HOH HOH . J 6 HOH H 83 483 129 HOH HOH . J 6 HOH H 84 484 147 HOH HOH . J 6 HOH H 85 485 387 HOH HOH . J 6 HOH H 86 486 380 HOH HOH . J 6 HOH H 87 487 258 HOH HOH . J 6 HOH H 88 488 169 HOH HOH . J 6 HOH H 89 489 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . H 5 -7.904 0.463 9.341 1 32.51 ? C ACT 308 H 1 HETATM 2 O O ACT . . . H 5 -8.647 0.891 8.515 1 39.43 ? O ACT 308 H 1 HETATM 3 O OXT ACT . . . H 5 -7.159 -0.619 9.278 1 49.18 ? OXT ACT 308 H 1 HETATM 4 C CH3 ACT . . . H 5 -7.854 1.373 10.676 1 40.99 ? CH3 ACT 308 H 1 HETATM 5 H H1 ACT . . . H 5 -8.742 1.427 11.062 1 49.19 ? H1 ACT 308 H 1 HETATM 6 H H2 ACT . . . H 5 -7.59 2.277 10.445 1 49.19 ? H2 ACT 308 H 1 HETATM 7 H H3 ACT . . . H 5 -7.239 1.013 11.334 1 49.19 ? H3 ACT 308 H 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #