data_6MTU # _model_server_result.job_id aWki-4GXpnkRDwDhQed13w _model_server_result.datetime_utc '2024-11-04 22:02:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mtu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":902}' # _entry.id 6MTU # _exptl.entry_id 6MTU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MTU _cell.length_a 53.6 _cell.length_b 53.6 _cell.length_c 214.454 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MTU _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K,L,M,N,O,P,V,Y 1 1 B,C,Q,R,S,T,U,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 P N N ? 4 R N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C THR 6 C THR 827 1_555 C N SEP 7 C SEP 828 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 C C SEP 7 C SEP 828 1_555 C N LEU 8 C LEU 829 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 D C THR 6 D THR 827 1_555 D N SEP 7 D SEP 828 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 D C SEP 7 D SEP 828 1_555 D N LEU 8 D LEU 829 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6MTU _atom_sites.fract_transf_matrix[1][1] 0.018657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018657 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PEG A 1 901 901 PEG PEG . F 4 EDO A 1 902 902 EDO EDO . G 3 PEG A 1 903 903 PEG PEG . H 5 PO4 A 1 904 904 PO4 PO4 . I 4 EDO A 1 905 905 EDO EDO . J 4 EDO A 1 906 906 EDO EDO . K 4 EDO A 1 907 907 EDO EDO . L 4 EDO A 1 908 908 EDO EDO . M 4 EDO A 1 909 909 EDO EDO . N 4 EDO A 1 910 910 EDO EDO . O 6 CL A 1 911 911 CL CL . P 4 EDO A 1 912 1001 EDO EDO . Q 5 PO4 B 1 901 901 PO4 PO4 . R 4 EDO B 1 902 902 EDO EDO . S 4 EDO B 1 903 903 EDO EDO . T 3 PEG B 1 904 904 PEG PEG . U 3 PEG B 1 905 905 PEG PEG . V 7 HOH A 1 1001 46 HOH HOH . V 7 HOH A 2 1002 5 HOH HOH . V 7 HOH A 3 1003 30 HOH HOH . V 7 HOH A 4 1004 11 HOH HOH . V 7 HOH A 5 1005 40 HOH HOH . V 7 HOH A 6 1006 4 HOH HOH . V 7 HOH A 7 1007 6 HOH HOH . V 7 HOH A 8 1008 24 HOH HOH . V 7 HOH A 9 1009 38 HOH HOH . V 7 HOH A 10 1010 39 HOH HOH . V 7 HOH A 11 1011 9 HOH HOH . V 7 HOH A 12 1012 7 HOH HOH . V 7 HOH A 13 1013 35 HOH HOH . V 7 HOH A 14 1014 8 HOH HOH . V 7 HOH A 15 1015 10 HOH HOH . V 7 HOH A 16 1016 36 HOH HOH . V 7 HOH A 17 1017 52 HOH HOH . V 7 HOH A 18 1018 45 HOH HOH . V 7 HOH A 19 1019 41 HOH HOH . V 7 HOH A 20 1020 37 HOH HOH . V 7 HOH A 21 1021 33 HOH HOH . V 7 HOH A 22 1022 23 HOH HOH . V 7 HOH A 23 1023 51 HOH HOH . V 7 HOH A 24 1024 54 HOH HOH . V 7 HOH A 25 1025 44 HOH HOH . V 7 HOH A 26 1026 50 HOH HOH . V 7 HOH A 27 1027 42 HOH HOH . V 7 HOH A 28 1028 53 HOH HOH . W 7 HOH B 1 1001 14 HOH HOH . W 7 HOH B 2 1002 26 HOH HOH . W 7 HOH B 3 1003 15 HOH HOH . W 7 HOH B 4 1004 32 HOH HOH . W 7 HOH B 5 1005 19 HOH HOH . W 7 HOH B 6 1006 28 HOH HOH . W 7 HOH B 7 1007 31 HOH HOH . W 7 HOH B 8 1008 17 HOH HOH . W 7 HOH B 9 1009 43 HOH HOH . W 7 HOH B 10 1010 18 HOH HOH . W 7 HOH B 11 1011 47 HOH HOH . W 7 HOH B 12 1012 48 HOH HOH . W 7 HOH B 13 1013 49 HOH HOH . X 7 HOH C 1 901 12 HOH HOH . X 7 HOH C 2 902 21 HOH HOH . Y 7 HOH D 1 901 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . R 4 35.752 -15.07 24.669 1 57.27 ? C1 EDO 902 B 1 HETATM 2 O O1 EDO . . . R 4 35.333 -16.439 24.666 1 60.96 ? O1 EDO 902 B 1 HETATM 3 C C2 EDO . . . R 4 34.813 -14.252 23.79 1 66.3 ? C2 EDO 902 B 1 HETATM 4 O O2 EDO . . . R 4 34.769 -12.902 24.265 1 61.25 ? O2 EDO 902 B 1 HETATM 5 H H11 EDO . . . R 4 35.741 -14.68 25.689 1 68.79 ? H11 EDO 902 B 1 HETATM 6 H H12 EDO . . . R 4 36.774 -14.994 24.292 1 68.79 ? H12 EDO 902 B 1 HETATM 7 H HO1 EDO . . . R 4 35.926 -16.959 25.225 1 73.21 ? HO1 EDO 902 B 1 HETATM 8 H H21 EDO . . . R 4 35.163 -14.271 22.756 1 79.63 ? H21 EDO 902 B 1 HETATM 9 H H22 EDO . . . R 4 33.811 -14.687 23.814 1 79.63 ? H22 EDO 902 B 1 HETATM 10 H HO2 EDO . . . R 4 34.191 -12.378 23.693 1 73.57 ? HO2 EDO 902 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #