data_6MU0 # _model_server_result.job_id D_iexBFMbW0L9DwIiHJJvQ _model_server_result.datetime_utc '2025-01-25 08:19:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mu0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6MU0 # _exptl.entry_id 6MU0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 230.11 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description RIBULOSE-5-PHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MU0 _cell.length_a 45.35 _cell.length_b 45.35 _cell.length_c 138.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MU0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0 1 0 1 0 0 0 0 -1 -45.35 45.35 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 76 A ILE 68 1_555 A N CSD 77 A CSD 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 77 A CSD 69 1_555 A N GLY 78 A GLY 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C5 H11 O8 P' _chem_comp.formula_weight 230.11 _chem_comp.id 5RP _chem_comp.mon_nstd_flag . _chem_comp.name RIBULOSE-5-PHOSPHATE _chem_comp.type saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 5RP sing 1 n n C2 O1 5RP sing 2 n n C2 H21 5RP sing 3 n n C2 H22 5RP sing 4 n n C3 C5 5RP sing 5 n n C3 O4 5RP doub 6 n n C5 O13 5RP sing 7 n n C5 C6 5RP sing 8 n n C5 H5 5RP sing 9 n n O13 H13 5RP sing 10 n n C6 O14 5RP sing 11 n n C6 C7 5RP sing 12 n n C6 H6 5RP sing 13 n n O14 H14 5RP sing 14 n n C7 O8 5RP sing 15 n n C7 H71 5RP sing 16 n n C7 H72 5RP sing 17 n n O8 P9 5RP sing 18 n n P9 O12 5RP doub 19 n n P9 O11 5RP sing 20 n n P9 O10 5RP sing 21 n n O11 H11 5RP sing 22 n n O10 H10 5RP sing 23 n n O1 HO1 5RP sing 24 n n # _atom_sites.entry_id 6MU0 _atom_sites.fract_transf_matrix[1][1] 0.022051 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00722 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5RP A 1 201 201 5RP 5RP . C 3 HOH A 1 301 147 HOH HOH . C 3 HOH A 2 302 219 HOH HOH . C 3 HOH A 3 303 51 HOH HOH . C 3 HOH A 4 304 7 HOH HOH . C 3 HOH A 5 305 101 HOH HOH . C 3 HOH A 6 306 89 HOH HOH . C 3 HOH A 7 307 99 HOH HOH . C 3 HOH A 8 308 137 HOH HOH . C 3 HOH A 9 309 49 HOH HOH . C 3 HOH A 10 310 41 HOH HOH . C 3 HOH A 11 311 195 HOH HOH . C 3 HOH A 12 312 212 HOH HOH . C 3 HOH A 13 313 207 HOH HOH . C 3 HOH A 14 314 153 HOH HOH . C 3 HOH A 15 315 20 HOH HOH . C 3 HOH A 16 316 90 HOH HOH . C 3 HOH A 17 317 178 HOH HOH . C 3 HOH A 18 318 199 HOH HOH . C 3 HOH A 19 319 151 HOH HOH . C 3 HOH A 20 320 14 HOH HOH . C 3 HOH A 21 321 81 HOH HOH . C 3 HOH A 22 322 75 HOH HOH . C 3 HOH A 23 323 152 HOH HOH . C 3 HOH A 24 324 173 HOH HOH . C 3 HOH A 25 325 37 HOH HOH . C 3 HOH A 26 326 208 HOH HOH . C 3 HOH A 27 327 198 HOH HOH . C 3 HOH A 28 328 177 HOH HOH . C 3 HOH A 29 329 132 HOH HOH . C 3 HOH A 30 330 27 HOH HOH . C 3 HOH A 31 331 170 HOH HOH . C 3 HOH A 32 332 180 HOH HOH . C 3 HOH A 33 333 133 HOH HOH . C 3 HOH A 34 334 149 HOH HOH . C 3 HOH A 35 335 54 HOH HOH . C 3 HOH A 36 336 13 HOH HOH . C 3 HOH A 37 337 79 HOH HOH . C 3 HOH A 38 338 110 HOH HOH . C 3 HOH A 39 339 64 HOH HOH . C 3 HOH A 40 340 57 HOH HOH . C 3 HOH A 41 341 3 HOH HOH . C 3 HOH A 42 342 130 HOH HOH . C 3 HOH A 43 343 103 HOH HOH . C 3 HOH A 44 344 32 HOH HOH . C 3 HOH A 45 345 143 HOH HOH . C 3 HOH A 46 346 35 HOH HOH . C 3 HOH A 47 347 209 HOH HOH . C 3 HOH A 48 348 50 HOH HOH . C 3 HOH A 49 349 55 HOH HOH . C 3 HOH A 50 350 9 HOH HOH . C 3 HOH A 51 351 15 HOH HOH . C 3 HOH A 52 352 25 HOH HOH . C 3 HOH A 53 353 65 HOH HOH . C 3 HOH A 54 354 26 HOH HOH . C 3 HOH A 55 355 160 HOH HOH . C 3 HOH A 56 356 53 HOH HOH . C 3 HOH A 57 357 46 HOH HOH . C 3 HOH A 58 358 19 HOH HOH . C 3 HOH A 59 359 18 HOH HOH . C 3 HOH A 60 360 5 HOH HOH . C 3 HOH A 61 361 155 HOH HOH . C 3 HOH A 62 362 1 HOH HOH . C 3 HOH A 63 363 4 HOH HOH . C 3 HOH A 64 364 30 HOH HOH . C 3 HOH A 65 365 84 HOH HOH . C 3 HOH A 66 366 24 HOH HOH . C 3 HOH A 67 367 128 HOH HOH . C 3 HOH A 68 368 123 HOH HOH . C 3 HOH A 69 369 59 HOH HOH . C 3 HOH A 70 370 11 HOH HOH . C 3 HOH A 71 371 58 HOH HOH . C 3 HOH A 72 372 42 HOH HOH . C 3 HOH A 73 373 2 HOH HOH . C 3 HOH A 74 374 60 HOH HOH . C 3 HOH A 75 375 125 HOH HOH . C 3 HOH A 76 376 33 HOH HOH . C 3 HOH A 77 377 82 HOH HOH . C 3 HOH A 78 378 45 HOH HOH . C 3 HOH A 79 379 87 HOH HOH . C 3 HOH A 80 380 111 HOH HOH . C 3 HOH A 81 381 43 HOH HOH . C 3 HOH A 82 382 8 HOH HOH . C 3 HOH A 83 383 12 HOH HOH . C 3 HOH A 84 384 70 HOH HOH . C 3 HOH A 85 385 17 HOH HOH . C 3 HOH A 86 386 47 HOH HOH . C 3 HOH A 87 387 69 HOH HOH . C 3 HOH A 88 388 67 HOH HOH . C 3 HOH A 89 389 40 HOH HOH . C 3 HOH A 90 390 78 HOH HOH . C 3 HOH A 91 391 28 HOH HOH . C 3 HOH A 92 392 95 HOH HOH . C 3 HOH A 93 393 214 HOH HOH . C 3 HOH A 94 394 194 HOH HOH . C 3 HOH A 95 395 44 HOH HOH . C 3 HOH A 96 396 68 HOH HOH . C 3 HOH A 97 397 112 HOH HOH . C 3 HOH A 98 398 72 HOH HOH . C 3 HOH A 99 399 107 HOH HOH . C 3 HOH A 100 400 80 HOH HOH . C 3 HOH A 101 401 166 HOH HOH . C 3 HOH A 102 402 21 HOH HOH . C 3 HOH A 103 403 135 HOH HOH . C 3 HOH A 104 404 183 HOH HOH . C 3 HOH A 105 405 114 HOH HOH . C 3 HOH A 106 406 167 HOH HOH . C 3 HOH A 107 407 168 HOH HOH . C 3 HOH A 108 408 74 HOH HOH . C 3 HOH A 109 409 6 HOH HOH . C 3 HOH A 110 410 127 HOH HOH . C 3 HOH A 111 411 34 HOH HOH . C 3 HOH A 112 412 165 HOH HOH . C 3 HOH A 113 413 169 HOH HOH . C 3 HOH A 114 414 22 HOH HOH . C 3 HOH A 115 415 121 HOH HOH . C 3 HOH A 116 416 94 HOH HOH . C 3 HOH A 117 417 206 HOH HOH . C 3 HOH A 118 418 73 HOH HOH . C 3 HOH A 119 419 10 HOH HOH . C 3 HOH A 120 420 16 HOH HOH . C 3 HOH A 121 421 163 HOH HOH . C 3 HOH A 122 422 203 HOH HOH . C 3 HOH A 123 423 134 HOH HOH . C 3 HOH A 124 424 116 HOH HOH . C 3 HOH A 125 425 48 HOH HOH . C 3 HOH A 126 426 204 HOH HOH . C 3 HOH A 127 427 62 HOH HOH . C 3 HOH A 128 428 88 HOH HOH . C 3 HOH A 129 429 56 HOH HOH . C 3 HOH A 130 430 91 HOH HOH . C 3 HOH A 131 431 222 HOH HOH . C 3 HOH A 132 432 188 HOH HOH . C 3 HOH A 133 433 52 HOH HOH . C 3 HOH A 134 434 98 HOH HOH . C 3 HOH A 135 435 63 HOH HOH . C 3 HOH A 136 436 29 HOH HOH . C 3 HOH A 137 437 31 HOH HOH . C 3 HOH A 138 438 200 HOH HOH . C 3 HOH A 139 439 39 HOH HOH . C 3 HOH A 140 440 142 HOH HOH . C 3 HOH A 141 441 179 HOH HOH . C 3 HOH A 142 442 71 HOH HOH . C 3 HOH A 143 443 76 HOH HOH . C 3 HOH A 144 444 215 HOH HOH . C 3 HOH A 145 445 23 HOH HOH . C 3 HOH A 146 446 106 HOH HOH . C 3 HOH A 147 447 109 HOH HOH . C 3 HOH A 148 448 156 HOH HOH . C 3 HOH A 149 449 218 HOH HOH . C 3 HOH A 150 450 161 HOH HOH . C 3 HOH A 151 451 118 HOH HOH . C 3 HOH A 152 452 174 HOH HOH . C 3 HOH A 153 453 145 HOH HOH . C 3 HOH A 154 454 105 HOH HOH . C 3 HOH A 155 455 171 HOH HOH . C 3 HOH A 156 456 129 HOH HOH . C 3 HOH A 157 457 97 HOH HOH . C 3 HOH A 158 458 187 HOH HOH . C 3 HOH A 159 459 164 HOH HOH . C 3 HOH A 160 460 139 HOH HOH . C 3 HOH A 161 461 185 HOH HOH . C 3 HOH A 162 462 211 HOH HOH . C 3 HOH A 163 463 108 HOH HOH . C 3 HOH A 164 464 77 HOH HOH . C 3 HOH A 165 465 38 HOH HOH . C 3 HOH A 166 466 131 HOH HOH . C 3 HOH A 167 467 96 HOH HOH . C 3 HOH A 168 468 191 HOH HOH . C 3 HOH A 169 469 119 HOH HOH . C 3 HOH A 170 470 216 HOH HOH . C 3 HOH A 171 471 162 HOH HOH . C 3 HOH A 172 472 61 HOH HOH . C 3 HOH A 173 473 202 HOH HOH . C 3 HOH A 174 474 85 HOH HOH . C 3 HOH A 175 475 213 HOH HOH . C 3 HOH A 176 476 157 HOH HOH . C 3 HOH A 177 477 176 HOH HOH . C 3 HOH A 178 478 120 HOH HOH . C 3 HOH A 179 479 102 HOH HOH . C 3 HOH A 180 480 193 HOH HOH . C 3 HOH A 181 481 148 HOH HOH . C 3 HOH A 182 482 141 HOH HOH . C 3 HOH A 183 483 113 HOH HOH . C 3 HOH A 184 484 146 HOH HOH . C 3 HOH A 185 485 190 HOH HOH . C 3 HOH A 186 486 159 HOH HOH . C 3 HOH A 187 487 220 HOH HOH . C 3 HOH A 188 488 122 HOH HOH . C 3 HOH A 189 489 138 HOH HOH . C 3 HOH A 190 490 86 HOH HOH . C 3 HOH A 191 491 189 HOH HOH . C 3 HOH A 192 492 36 HOH HOH . C 3 HOH A 193 493 175 HOH HOH . C 3 HOH A 194 494 221 HOH HOH . C 3 HOH A 195 495 126 HOH HOH . C 3 HOH A 196 496 154 HOH HOH . C 3 HOH A 197 497 115 HOH HOH . C 3 HOH A 198 498 66 HOH HOH . C 3 HOH A 199 499 124 HOH HOH . C 3 HOH A 200 500 83 HOH HOH . C 3 HOH A 201 501 182 HOH HOH . C 3 HOH A 202 502 184 HOH HOH . C 3 HOH A 203 503 93 HOH HOH . C 3 HOH A 204 504 104 HOH HOH . C 3 HOH A 205 505 205 HOH HOH . C 3 HOH A 206 506 201 HOH HOH . C 3 HOH A 207 507 136 HOH HOH . C 3 HOH A 208 508 181 HOH HOH . C 3 HOH A 209 509 158 HOH HOH . C 3 HOH A 210 510 186 HOH HOH . C 3 HOH A 211 511 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 5RP . . . B 2 -28.072 20.142 10.919 1 11.2 ? C2 5RP 201 A 1 HETATM 2 C C3 5RP . . . B 2 -28.671 19.028 11.753 1 10.64 ? C3 5RP 201 A 1 HETATM 3 C C5 5RP . . . B 2 -28.254 18.95 13.23 1 9.19 ? C5 5RP 201 A 1 HETATM 4 O O13 5RP . . . B 2 -27.845 17.638 13.565 1 8.66 ? O13 5RP 201 A 1 HETATM 5 C C6 5RP . . . B 2 -29.514 19.352 14 1 9.17 ? C6 5RP 201 A 1 HETATM 6 O O14 5RP . . . B 2 -29.876 20.675 13.609 1 9.32 ? O14 5RP 201 A 1 HETATM 7 C C7 5RP . . . B 2 -29.322 19.281 15.499 1 9.32 ? C7 5RP 201 A 1 HETATM 8 O O8 5RP . . . B 2 -30.614 19.436 16.114 1 9 ? O8 5RP 201 A 1 HETATM 9 P P9 5RP . . . B 2 -30.726 19.456 17.714 1 9.02 ? P9 5RP 201 A 1 HETATM 10 O O12 5RP . . . B 2 -32.192 19.625 17.994 1 9.82 ? O12 5RP 201 A 1 HETATM 11 O O11 5RP . . . B 2 -30.169 18.128 18.215 1 9.19 ? O11 5RP 201 A 1 HETATM 12 O O10 5RP . . . B 2 -29.88 20.608 18.222 1 9.67 ? O10 5RP 201 A 1 HETATM 13 O O4 5RP . . . B 2 -29.489 18.246 11.315 1 10.49 ? O4 5RP 201 A 1 HETATM 14 O O1 5RP . . . B 2 -28.558 20.086 9.583 1 12.51 ? O1 5RP 201 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #