data_6MV5 # _model_server_result.job_id cbwUji_jG691uSuSGgnXwg _model_server_result.datetime_utc '2024-11-26 07:30:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mv5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":303}' # _entry.id 6MV5 # _exptl.entry_id 6MV5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MV5 _cell.length_a 70.449 _cell.length_b 100.42 _cell.length_c 86.59 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 98 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 22 H CYS 22 1_555 A SG CYS 98 H CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 A SG CYS 143 H CYS 140 1_555 A SG CYS 199 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 23 L CYS 23 1_555 B SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 B SG CYS 139 L CYS 134 1_555 B SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A C THR 60 H THR 57 1_555 A N NEP 61 H NEP 58 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C THR 60 H THR 57 1_555 A N NEP 61 H NEP 58 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C NEP 61 H NEP 58 1_555 A N TYR 62 H TYR 59 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C NEP 61 H NEP 58 1_555 A N TYR 62 H TYR 59 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 C C ACE 1 P ACE 1 1_555 C N LYS 2 P LYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc1 A OD1 ASP 56 H ASP 53 1_555 D ZN ZN . H ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc2 A NE2 HIS 167 H HIS 164 1_555 G ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc3 D ZN ZN . H ZN 301 1_555 F S SO4 . H SO4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc4 D ZN ZN . H ZN 301 1_555 F O3 SO4 . H SO4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc5 D ZN ZN . H ZN 301 1_555 F O4 SO4 . H SO4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc6 D ZN ZN . H ZN 301 4_454 B OD1 ASP 65 L ASP 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc7 D ZN ZN . H ZN 301 1_555 C OE1 GLU 18 P GLU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc8 D ZN ZN . H ZN 301 1_555 C OE2 GLU 18 P GLU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc9 B OE1 GLU 84 L GLU 79 1_555 H ZN ZN . L ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc10 B OE2 GLU 84 L GLU 79 1_555 H ZN ZN . L ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc11 B OE1 GLU 86 L GLU 81 1_555 H ZN ZN . L ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc12 B OD1 ASN 142 L ASN 137 1_555 G ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc13 B ND2 ASN 142 L ASN 137 1_555 G ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc14 B OD1 ASN 143 L ASN 138 1_555 G ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc15 B ND2 ASN 143 L ASN 138 1_555 G ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc16 B OD1 ASP 190 L ASP 185 1_555 I ZN ZN . L ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc17 B OD2 ASP 190 L ASP 185 1_555 I ZN ZN . L ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc18 H ZN ZN . L ZN 302 4_554 C OE1 GLU 19 P GLU 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc19 H ZN ZN . L ZN 302 4_554 C OE2 GLU 19 P GLU 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc20 I ZN ZN . L ZN 303 1_555 J O3 SO4 . L SO4 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6MV5 _atom_sites.fract_transf_matrix[1][1] 0.014195 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009958 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011549 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN H 1 301 4 ZN ZN . E 5 CL H 1 302 1 CL CL . F 6 SO4 H 1 303 1 SO4 SO4 . G 4 ZN L 1 301 1 ZN ZN . H 4 ZN L 1 302 2 ZN ZN . I 4 ZN L 1 303 3 ZN ZN . J 6 SO4 L 1 304 2 SO4 SO4 . K 7 HOH H 1 401 138 HOH HOH . K 7 HOH H 2 402 42 HOH HOH . K 7 HOH H 3 403 17 HOH HOH . K 7 HOH H 4 404 127 HOH HOH . K 7 HOH H 5 405 27 HOH HOH . K 7 HOH H 6 406 55 HOH HOH . K 7 HOH H 7 407 41 HOH HOH . K 7 HOH H 8 408 115 HOH HOH . K 7 HOH H 9 409 35 HOH HOH . K 7 HOH H 10 410 130 HOH HOH . K 7 HOH H 11 411 142 HOH HOH . K 7 HOH H 12 412 10 HOH HOH . K 7 HOH H 13 413 89 HOH HOH . K 7 HOH H 14 414 67 HOH HOH . K 7 HOH H 15 415 62 HOH HOH . K 7 HOH H 16 416 121 HOH HOH . K 7 HOH H 17 417 44 HOH HOH . K 7 HOH H 18 418 92 HOH HOH . K 7 HOH H 19 419 6 HOH HOH . K 7 HOH H 20 420 54 HOH HOH . K 7 HOH H 21 421 109 HOH HOH . K 7 HOH H 22 422 96 HOH HOH . K 7 HOH H 23 423 12 HOH HOH . K 7 HOH H 24 424 70 HOH HOH . K 7 HOH H 25 425 99 HOH HOH . K 7 HOH H 26 426 29 HOH HOH . K 7 HOH H 27 427 78 HOH HOH . K 7 HOH H 28 428 68 HOH HOH . K 7 HOH H 29 429 125 HOH HOH . K 7 HOH H 30 430 36 HOH HOH . K 7 HOH H 31 431 65 HOH HOH . K 7 HOH H 32 432 82 HOH HOH . K 7 HOH H 33 433 76 HOH HOH . K 7 HOH H 34 434 5 HOH HOH . K 7 HOH H 35 435 63 HOH HOH . K 7 HOH H 36 436 11 HOH HOH . K 7 HOH H 37 437 49 HOH HOH . K 7 HOH H 38 438 84 HOH HOH . K 7 HOH H 39 439 129 HOH HOH . K 7 HOH H 40 440 136 HOH HOH . K 7 HOH H 41 441 28 HOH HOH . K 7 HOH H 42 442 85 HOH HOH . K 7 HOH H 43 443 23 HOH HOH . K 7 HOH H 44 444 20 HOH HOH . K 7 HOH H 45 445 14 HOH HOH . K 7 HOH H 46 446 7 HOH HOH . K 7 HOH H 47 447 116 HOH HOH . K 7 HOH H 48 448 108 HOH HOH . K 7 HOH H 49 449 123 HOH HOH . K 7 HOH H 50 450 118 HOH HOH . K 7 HOH H 51 451 140 HOH HOH . K 7 HOH H 52 452 33 HOH HOH . K 7 HOH H 53 453 13 HOH HOH . K 7 HOH H 54 454 134 HOH HOH . K 7 HOH H 55 455 25 HOH HOH . K 7 HOH H 56 456 100 HOH HOH . K 7 HOH H 57 457 113 HOH HOH . K 7 HOH H 58 458 73 HOH HOH . K 7 HOH H 59 459 38 HOH HOH . K 7 HOH H 60 460 40 HOH HOH . K 7 HOH H 61 461 8 HOH HOH . K 7 HOH H 62 462 37 HOH HOH . K 7 HOH H 63 463 50 HOH HOH . K 7 HOH H 64 464 124 HOH HOH . K 7 HOH H 65 465 95 HOH HOH . K 7 HOH H 66 466 46 HOH HOH . K 7 HOH H 67 467 128 HOH HOH . K 7 HOH H 68 468 132 HOH HOH . K 7 HOH H 69 469 112 HOH HOH . K 7 HOH H 70 470 105 HOH HOH . K 7 HOH H 71 471 102 HOH HOH . K 7 HOH H 72 472 47 HOH HOH . K 7 HOH H 73 473 75 HOH HOH . L 7 HOH L 1 401 16 HOH HOH . L 7 HOH L 2 402 137 HOH HOH . L 7 HOH L 3 403 98 HOH HOH . L 7 HOH L 4 404 22 HOH HOH . L 7 HOH L 5 405 3 HOH HOH . L 7 HOH L 6 406 64 HOH HOH . L 7 HOH L 7 407 2 HOH HOH . L 7 HOH L 8 408 48 HOH HOH . L 7 HOH L 9 409 97 HOH HOH . L 7 HOH L 10 410 31 HOH HOH . L 7 HOH L 11 411 39 HOH HOH . L 7 HOH L 12 412 15 HOH HOH . L 7 HOH L 13 413 94 HOH HOH . L 7 HOH L 14 414 57 HOH HOH . L 7 HOH L 15 415 133 HOH HOH . L 7 HOH L 16 416 32 HOH HOH . L 7 HOH L 17 417 114 HOH HOH . L 7 HOH L 18 418 9 HOH HOH . L 7 HOH L 19 419 30 HOH HOH . L 7 HOH L 20 420 43 HOH HOH . L 7 HOH L 21 421 58 HOH HOH . L 7 HOH L 22 422 88 HOH HOH . L 7 HOH L 23 423 4 HOH HOH . L 7 HOH L 24 424 19 HOH HOH . L 7 HOH L 25 425 139 HOH HOH . L 7 HOH L 26 426 74 HOH HOH . L 7 HOH L 27 427 59 HOH HOH . L 7 HOH L 28 428 53 HOH HOH . L 7 HOH L 29 429 126 HOH HOH . L 7 HOH L 30 430 120 HOH HOH . L 7 HOH L 31 431 104 HOH HOH . L 7 HOH L 32 432 69 HOH HOH . L 7 HOH L 33 433 34 HOH HOH . L 7 HOH L 34 434 91 HOH HOH . L 7 HOH L 35 435 103 HOH HOH . L 7 HOH L 36 436 18 HOH HOH . L 7 HOH L 37 437 72 HOH HOH . L 7 HOH L 38 438 24 HOH HOH . L 7 HOH L 39 439 106 HOH HOH . L 7 HOH L 40 440 52 HOH HOH . L 7 HOH L 41 441 143 HOH HOH . L 7 HOH L 42 442 107 HOH HOH . L 7 HOH L 43 443 45 HOH HOH . L 7 HOH L 44 444 122 HOH HOH . L 7 HOH L 45 445 79 HOH HOH . L 7 HOH L 46 446 117 HOH HOH . L 7 HOH L 47 447 26 HOH HOH . L 7 HOH L 48 448 80 HOH HOH . L 7 HOH L 49 449 131 HOH HOH . L 7 HOH L 50 450 141 HOH HOH . L 7 HOH L 51 451 93 HOH HOH . L 7 HOH L 52 452 87 HOH HOH . L 7 HOH L 53 453 86 HOH HOH . M 7 HOH P 1 101 135 HOH HOH . M 7 HOH P 2 102 21 HOH HOH . M 7 HOH P 3 103 101 HOH HOH . M 7 HOH P 4 104 71 HOH HOH . M 7 HOH P 5 105 83 HOH HOH . M 7 HOH P 6 106 60 HOH HOH . M 7 HOH P 7 107 51 HOH HOH . M 7 HOH P 8 108 1 HOH HOH . M 7 HOH P 9 109 61 HOH HOH . M 7 HOH P 10 110 77 HOH HOH . M 7 HOH P 11 111 111 HOH HOH . M 7 HOH P 12 112 119 HOH HOH . M 7 HOH P 13 113 110 HOH HOH . M 7 HOH P 14 114 81 HOH HOH . M 7 HOH P 15 115 56 HOH HOH . M 7 HOH P 16 116 90 HOH HOH . M 7 HOH P 17 117 66 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x -7.952 _atom_site.Cartn_y 20.842 _atom_site.Cartn_z 18.113 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 124.7 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 303 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #