data_6MVV
#
_model_server_result.job_id            Azt5daCy3Ds3AuKSKIx6wg 
_model_server_result.datetime_utc      '2024-12-01 12:27:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mvv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1302}' 
#
_entry.id    6MVV 
#
_exptl.entry_id    6MVV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              678.94 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MVV 
_cell.length_a            125.782 
_cell.length_b            125.969 
_cell.length_c            192.299 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MVV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 N N N 
#
_chem_comp.formula           'C36 H73 N O8 P 1' 
_chem_comp.formula_weight    678.94 
_chem_comp.id                PX4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 P1 PX4 sing 281 n n 
O1 H1P PX4 sing 282 n n 
O2 P1 PX4 doub 283 n n 
P1 O3 PX4 sing 284 n n 
P1 O4 PX4 sing 285 n n 
O3 C1 PX4 sing 286 n n 
C1 C2 PX4 sing 287 n n 
C1 H1 PX4 sing 288 n n 
C1 H2 PX4 sing 289 n n 
C2 N1 PX4 sing 290 n n 
C2 H3 PX4 sing 291 n n 
C2 H4 PX4 sing 292 n n 
N1 C3 PX4 sing 293 n n 
N1 C4 PX4 sing 294 n n 
N1 C5 PX4 sing 295 n n 
C3 H5 PX4 sing 296 n n 
C3 H6 PX4 sing 297 n n 
C3 H7 PX4 sing 298 n n 
C4 H8 PX4 sing 299 n n 
C4 H9 PX4 sing 300 n n 
C4 H10 PX4 sing 301 n n 
C5 H11 PX4 sing 302 n n 
C5 H12 PX4 sing 303 n n 
C5 H13 PX4 sing 304 n n 
O4 C6 PX4 sing 305 n n 
C6 C7 PX4 sing 306 n n 
C6 H14 PX4 sing 307 n n 
C6 H15 PX4 sing 308 n n 
C7 C8 PX4 sing 309 n n 
C7 O7 PX4 sing 310 n n 
C7 H16 PX4 sing 311 n n 
C8 O5 PX4 sing 312 n n 
C8 H17 PX4 sing 313 n n 
C8 H18 PX4 sing 314 n n 
O5 C9 PX4 sing 315 n n 
C9 O6 PX4 doub 316 n n 
C9 C10 PX4 sing 317 n n 
C10 C11 PX4 sing 318 n n 
C10 H19 PX4 sing 319 n n 
C10 H20 PX4 sing 320 n n 
C11 C12 PX4 sing 321 n n 
C11 H21 PX4 sing 322 n n 
C11 H22 PX4 sing 323 n n 
C12 C13 PX4 sing 324 n n 
C12 H23 PX4 sing 325 n n 
C12 H24 PX4 sing 326 n n 
C13 C14 PX4 sing 327 n n 
C13 H25 PX4 sing 328 n n 
C13 H26 PX4 sing 329 n n 
C14 C15 PX4 sing 330 n n 
C14 H27 PX4 sing 331 n n 
C14 H28 PX4 sing 332 n n 
C15 C16 PX4 sing 333 n n 
C15 H29 PX4 sing 334 n n 
C15 H30 PX4 sing 335 n n 
C16 C17 PX4 sing 336 n n 
C16 H31 PX4 sing 337 n n 
C16 H32 PX4 sing 338 n n 
C17 C18 PX4 sing 339 n n 
C17 H33 PX4 sing 340 n n 
C17 H34 PX4 sing 341 n n 
C18 C19 PX4 sing 342 n n 
C18 H35 PX4 sing 343 n n 
C18 H36 PX4 sing 344 n n 
C19 C20 PX4 sing 345 n n 
C19 H37 PX4 sing 346 n n 
C19 H38 PX4 sing 347 n n 
C20 C21 PX4 sing 348 n n 
C20 H39 PX4 sing 349 n n 
C20 H40 PX4 sing 350 n n 
C21 C22 PX4 sing 351 n n 
C21 H41 PX4 sing 352 n n 
C21 H42 PX4 sing 353 n n 
C22 H43 PX4 sing 354 n n 
C22 H44 PX4 sing 355 n n 
C22 H45 PX4 sing 356 n n 
O7 C23 PX4 sing 357 n n 
C23 O8 PX4 doub 358 n n 
C23 C24 PX4 sing 359 n n 
C24 C25 PX4 sing 360 n n 
C24 H46 PX4 sing 361 n n 
C24 H47 PX4 sing 362 n n 
C25 C26 PX4 sing 363 n n 
C25 H48 PX4 sing 364 n n 
C25 H49 PX4 sing 365 n n 
C26 C27 PX4 sing 366 n n 
C26 H50 PX4 sing 367 n n 
C26 H51 PX4 sing 368 n n 
C27 C28 PX4 sing 369 n n 
C27 H52 PX4 sing 370 n n 
C27 H53 PX4 sing 371 n n 
C28 C29 PX4 sing 372 n n 
C28 H54 PX4 sing 373 n n 
C28 H55 PX4 sing 374 n n 
C29 C30 PX4 sing 375 n n 
C29 H56 PX4 sing 376 n n 
C29 H57 PX4 sing 377 n n 
C30 C31 PX4 sing 378 n n 
C30 H58 PX4 sing 379 n n 
C30 H59 PX4 sing 380 n n 
C31 C32 PX4 sing 381 n n 
C31 H60 PX4 sing 382 n n 
C31 H61 PX4 sing 383 n n 
C32 C33 PX4 sing 384 n n 
C32 H62 PX4 sing 385 n n 
C32 H63 PX4 sing 386 n n 
C33 C34 PX4 sing 387 n n 
C33 H64 PX4 sing 388 n n 
C33 H65 PX4 sing 389 n n 
C34 C35 PX4 sing 390 n n 
C34 H66 PX4 sing 391 n n 
C34 H67 PX4 sing 392 n n 
C35 C36 PX4 sing 393 n n 
C35 H68 PX4 sing 394 n n 
C35 H69 PX4 sing 395 n n 
C36 H70 PX4 sing 396 n n 
C36 H71 PX4 sing 397 n n 
C36 H72 PX4 sing 398 n n 
#
_atom_sites.entry_id                     6MVV 
_atom_sites.fract_transf_matrix[1][1]    0.00795 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007938 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0052 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PX4 A 1 1301 1301 PX4 PX4 . 
F 3 PO4 A 1 1302 1302 PO4 PO4 . 
G 3 PO4 A 1 1303 1303 PO4 PO4 . 
H 2 PX4 B 1 2301 2301 PX4 PX4 . 
I 2 PX4 B 1 2302 2302 PX4 PX4 . 
J 3 PO4 B 1 2303 2303 PO4 PO4 . 
K 2 PX4 C 1 1301 1301 PX4 PX4 . 
L 2 PX4 C 1 1302 1302 PX4 PX4 . 
M 3 PO4 C 1 1303 1303 PO4 PO4 . 
N 2 PX4 D 1 2301 2301 PX4 PX4 . 
O 3 PO4 D 1 2302 2302 PO4 PO4 . 
P 4 HOH A 1 1401 1401 HOH HOH . 
Q 4 HOH B 1 2401 2401 HOH HOH . 
Q 4 HOH B 2 2402 2402 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PX4 . . . L 2 98.958 25.089 7.317 1 124.25 ? O1 PX4 1302 C 1 
HETATM 2 O O2 PX4 . . . L 2 100.926 23.606 7.466 1 128.68 ? O2 PX4 1302 C 1 
HETATM 3 P P1 PX4 . . . L 2 99.411 23.669 7.592 1 127.37 ? P1 PX4 1302 C 1 
HETATM 4 O O3 PX4 . . . L 2 98.747 22.669 6.552 1 121.12 ? O3 PX4 1302 C 1 
HETATM 5 C C1 PX4 . . . L 2 99.595 21.974 5.652 1 116.04 ? C1 PX4 1302 C 1 
HETATM 6 C C2 PX4 . . . L 2 99.078 22.08 4.197 1 110.13 ? C2 PX4 1302 C 1 
HETATM 7 N N1 PX4 . . . L 2 100.192 22.222 3.25 1 106.28 ? N1 PX4 1302 C 1 
HETATM 8 C C3 PX4 . . . L 2 101.212 21.232 3.504 1 106.9 ? C3 PX4 1302 C 1 
HETATM 9 C C4 PX4 . . . L 2 100.755 23.513 3.38 1 101.8 ? C4 PX4 1302 C 1 
HETATM 10 C C5 PX4 . . . L 2 99.689 22.047 1.875 1 106.06 ? C5 PX4 1302 C 1 
HETATM 11 O O4 PX4 . . . L 2 98.993 23.246 9.085 1 133.12 ? O4 PX4 1302 C 1 
HETATM 12 C C6 PX4 . . . L 2 98.043 24.044 9.816 1 129.35 ? C6 PX4 1302 C 1 
HETATM 13 C C7 PX4 . . . L 2 98.752 25.11 10.659 1 117.84 ? C7 PX4 1302 C 1 
HETATM 14 O O7 PX4 . . . L 2 100.054 24.663 11.037 1 98.09 ? O7 PX4 1302 C 1 
HETATM 15 C C23 PX4 . . . L 2 101.091 25.115 10.165 1 92.39 ? C23 PX4 1302 C 1 
HETATM 16 O O8 PX4 . . . L 2 100.858 25.987 9.331 1 90.28 ? O8 PX4 1302 C 1 
HETATM 17 C C24 PX4 . . . L 2 102.479 24.494 10.268 1 82.8 ? C24 PX4 1302 C 1 
HETATM 18 C C25 PX4 . . . L 2 102.99 24.537 11.72 1 69.34 ? C25 PX4 1302 C 1 
HETATM 19 C C26 PX4 . . . L 2 104.143 25.586 11.879 1 53.25 ? C26 PX4 1302 C 1 
HETATM 20 C C27 PX4 . . . L 2 104.479 25.725 13.386 1 40.48 ? C27 PX4 1302 C 1 
HETATM 21 C C28 PX4 . . . L 2 103.176 25.925 14.174 1 30.96 ? C28 PX4 1302 C 1 
HETATM 22 C C29 PX4 . . . L 2 103.42 25.776 15.664 1 27.07 ? C29 PX4 1302 C 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           22 
#