data_6MVW
#
_model_server_result.job_id            unkHu7CbcfOc2G1iiWE_hg 
_model_server_result.datetime_utc      '2024-10-27 14:32:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6mvw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":2302}' 
#
_entry.id    6MVW 
#
_exptl.entry_id    6MVW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              678.94 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6MVW 
_cell.length_a            126.22 
_cell.length_b            126.09 
_cell.length_c            192.88 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6MVW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 N N N 
? 2 O N N 
? 2 R N N 
? 2 S N N 
#
_chem_comp.formula           'C36 H73 N O8 P 1' 
_chem_comp.formula_weight    678.94 
_chem_comp.id                PX4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 P1 PX4 sing 279 n n 
O1 H1P PX4 sing 280 n n 
O2 P1 PX4 doub 281 n n 
P1 O3 PX4 sing 282 n n 
P1 O4 PX4 sing 283 n n 
O3 C1 PX4 sing 284 n n 
C1 C2 PX4 sing 285 n n 
C1 H1 PX4 sing 286 n n 
C1 H2 PX4 sing 287 n n 
C2 N1 PX4 sing 288 n n 
C2 H3 PX4 sing 289 n n 
C2 H4 PX4 sing 290 n n 
N1 C3 PX4 sing 291 n n 
N1 C4 PX4 sing 292 n n 
N1 C5 PX4 sing 293 n n 
C3 H5 PX4 sing 294 n n 
C3 H6 PX4 sing 295 n n 
C3 H7 PX4 sing 296 n n 
C4 H8 PX4 sing 297 n n 
C4 H9 PX4 sing 298 n n 
C4 H10 PX4 sing 299 n n 
C5 H11 PX4 sing 300 n n 
C5 H12 PX4 sing 301 n n 
C5 H13 PX4 sing 302 n n 
O4 C6 PX4 sing 303 n n 
C6 C7 PX4 sing 304 n n 
C6 H14 PX4 sing 305 n n 
C6 H15 PX4 sing 306 n n 
C7 C8 PX4 sing 307 n n 
C7 O7 PX4 sing 308 n n 
C7 H16 PX4 sing 309 n n 
C8 O5 PX4 sing 310 n n 
C8 H17 PX4 sing 311 n n 
C8 H18 PX4 sing 312 n n 
O5 C9 PX4 sing 313 n n 
C9 O6 PX4 doub 314 n n 
C9 C10 PX4 sing 315 n n 
C10 C11 PX4 sing 316 n n 
C10 H19 PX4 sing 317 n n 
C10 H20 PX4 sing 318 n n 
C11 C12 PX4 sing 319 n n 
C11 H21 PX4 sing 320 n n 
C11 H22 PX4 sing 321 n n 
C12 C13 PX4 sing 322 n n 
C12 H23 PX4 sing 323 n n 
C12 H24 PX4 sing 324 n n 
C13 C14 PX4 sing 325 n n 
C13 H25 PX4 sing 326 n n 
C13 H26 PX4 sing 327 n n 
C14 C15 PX4 sing 328 n n 
C14 H27 PX4 sing 329 n n 
C14 H28 PX4 sing 330 n n 
C15 C16 PX4 sing 331 n n 
C15 H29 PX4 sing 332 n n 
C15 H30 PX4 sing 333 n n 
C16 C17 PX4 sing 334 n n 
C16 H31 PX4 sing 335 n n 
C16 H32 PX4 sing 336 n n 
C17 C18 PX4 sing 337 n n 
C17 H33 PX4 sing 338 n n 
C17 H34 PX4 sing 339 n n 
C18 C19 PX4 sing 340 n n 
C18 H35 PX4 sing 341 n n 
C18 H36 PX4 sing 342 n n 
C19 C20 PX4 sing 343 n n 
C19 H37 PX4 sing 344 n n 
C19 H38 PX4 sing 345 n n 
C20 C21 PX4 sing 346 n n 
C20 H39 PX4 sing 347 n n 
C20 H40 PX4 sing 348 n n 
C21 C22 PX4 sing 349 n n 
C21 H41 PX4 sing 350 n n 
C21 H42 PX4 sing 351 n n 
C22 H43 PX4 sing 352 n n 
C22 H44 PX4 sing 353 n n 
C22 H45 PX4 sing 354 n n 
O7 C23 PX4 sing 355 n n 
C23 O8 PX4 doub 356 n n 
C23 C24 PX4 sing 357 n n 
C24 C25 PX4 sing 358 n n 
C24 H46 PX4 sing 359 n n 
C24 H47 PX4 sing 360 n n 
C25 C26 PX4 sing 361 n n 
C25 H48 PX4 sing 362 n n 
C25 H49 PX4 sing 363 n n 
C26 C27 PX4 sing 364 n n 
C26 H50 PX4 sing 365 n n 
C26 H51 PX4 sing 366 n n 
C27 C28 PX4 sing 367 n n 
C27 H52 PX4 sing 368 n n 
C27 H53 PX4 sing 369 n n 
C28 C29 PX4 sing 370 n n 
C28 H54 PX4 sing 371 n n 
C28 H55 PX4 sing 372 n n 
C29 C30 PX4 sing 373 n n 
C29 H56 PX4 sing 374 n n 
C29 H57 PX4 sing 375 n n 
C30 C31 PX4 sing 376 n n 
C30 H58 PX4 sing 377 n n 
C30 H59 PX4 sing 378 n n 
C31 C32 PX4 sing 379 n n 
C31 H60 PX4 sing 380 n n 
C31 H61 PX4 sing 381 n n 
C32 C33 PX4 sing 382 n n 
C32 H62 PX4 sing 383 n n 
C32 H63 PX4 sing 384 n n 
C33 C34 PX4 sing 385 n n 
C33 H64 PX4 sing 386 n n 
C33 H65 PX4 sing 387 n n 
C34 C35 PX4 sing 388 n n 
C34 H66 PX4 sing 389 n n 
C34 H67 PX4 sing 390 n n 
C35 C36 PX4 sing 391 n n 
C35 H68 PX4 sing 392 n n 
C35 H69 PX4 sing 393 n n 
C36 H70 PX4 sing 394 n n 
C36 H71 PX4 sing 395 n n 
C36 H72 PX4 sing 396 n n 
#
_atom_sites.entry_id                     6MVW 
_atom_sites.fract_transf_matrix[1][1]    0.007923 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007931 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005185 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PX4 A 1 1301 1 PX4 PX4 . 
F 2 PX4 A 1 1302 7 PX4 PX4 . 
G 2 PX4 A 1 1303 10 PX4 PX4 . 
H 3 PO4 A 1 1304 3 PO4 PO4 . 
I 2 PX4 B 1 2301 6 PX4 PX4 . 
J 2 PX4 B 1 2302 8 PX4 PX4 . 
K 2 PX4 B 1 2303 9 PX4 PX4 . 
L 3 PO4 B 1 2304 1 PO4 PO4 . 
M 3 PO4 B 1 2305 7 PO4 PO4 . 
N 2 PX4 C 1 1301 3 PX4 PX4 . 
O 2 PX4 C 1 1302 5 PX4 PX4 . 
P 3 PO4 C 1 1303 2 PO4 PO4 . 
Q 3 PO4 C 1 1304 6 PO4 PO4 . 
R 2 PX4 D 1 2301 2 PX4 PX4 . 
S 2 PX4 D 1 2302 4 PX4 PX4 . 
T 3 PO4 D 1 2303 4 PO4 PO4 . 
U 3 PO4 D 1 2304 5 PO4 PO4 . 
V 3 PO4 D 1 2305 8 PO4 PO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PX4 . . . S 2 154.521 163.657 4.684 1 150.79 ? O1 PX4 2302 D 1 
HETATM 2 O O2 PX4 . . . S 2 152.707 162.189 5.536 1 134.5 ? O2 PX4 2302 D 1 
HETATM 3 P P1 PX4 . . . S 2 153.1 163.623 5.208 1 139.56 ? P1 PX4 2302 D 1 
HETATM 4 O O3 PX4 . . . S 2 152.12 164.205 4.109 1 142.49 ? O3 PX4 2302 D 1 
HETATM 5 C C1 PX4 . . . S 2 152.684 164.727 2.921 1 132.09 ? C1 PX4 2302 D 1 
HETATM 6 C C2 PX4 . . . S 2 151.805 164.334 1.713 1 117.17 ? C2 PX4 2302 D 1 
HETATM 7 N N1 PX4 . . . S 2 151.814 165.401 0.709 1 108.69 ? N1 PX4 2302 D 1 
HETATM 8 C C3 PX4 . . . S 2 153.172 165.743 0.357 1 110.88 ? C3 PX4 2302 D 1 
HETATM 9 C C4 PX4 . . . S 2 151.138 164.958 -0.451 1 110.03 ? C4 PX4 2302 D 1 
HETATM 10 C C5 PX4 . . . S 2 151.129 166.588 1.249 1 102.49 ? C5 PX4 2302 D 1 
HETATM 11 O O4 PX4 . . . S 2 152.994 164.517 6.534 1 116.23 ? O4 PX4 2302 D 1 
HETATM 12 C C6 PX4 . . . S 2 152.182 164.035 7.615 1 100.86 ? C6 PX4 2302 D 1 
HETATM 13 C C7 PX4 . . . S 2 152.433 164.896 8.855 1 77.5 ? C7 PX4 2302 D 1 
HETATM 14 C C8 PX4 . . . S 2 151.283 165.851 9.087 1 70.5 ? C8 PX4 2302 D 1 
HETATM 15 O O5 PX4 . . . S 2 150.056 165.266 8.671 1 66.6 ? O5 PX4 2302 D 1 
HETATM 16 C C9 PX4 . . . S 2 149.463 164.345 9.608 1 67.35 ? C9 PX4 2302 D 1 
HETATM 17 O O6 PX4 . . . S 2 149.592 163.163 9.429 1 78.79 ? O6 PX4 2302 D 1 
HETATM 18 C C10 PX4 . . . S 2 148.651 164.867 10.828 1 58.49 ? C10 PX4 2302 D 1 
HETATM 19 C C11 PX4 . . . S 2 149.57 165.138 12.053 1 64 ? C11 PX4 2302 D 1 
HETATM 20 C C12 PX4 . . . S 2 150.311 163.811 12.467 1 52.38 ? C12 PX4 2302 D 1 
HETATM 21 O O7 PX4 . . . S 2 152.575 164.044 9.989 1 57.32 ? O7 PX4 2302 D 1 
HETATM 22 C C23 PX4 . . . S 2 153.892 163.522 10.161 1 39.5 ? C23 PX4 2302 D 1 
HETATM 23 O O8 PX4 . . . S 2 154.822 163.944 9.482 1 54.71 ? O8 PX4 2302 D 1 
HETATM 24 C C24 PX4 . . . S 2 154.129 162.433 11.197 1 2.2 ? C24 PX4 2302 D 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#