data_6MWA # _model_server_result.job_id sKp4DHepVmBMJmQ_goRm4Q _model_server_result.datetime_utc '2024-11-23 03:02:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mwa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2302}' # _entry.id 6MWA # _exptl.entry_id 6MWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 678.94 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MWA _cell.length_a 124.772 _cell.length_b 124.772 _cell.length_c 189.797 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -124.772 -124.772 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -124.772 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -124.772 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C36 H73 N O8 P 1' _chem_comp.formula_weight 678.94 _chem_comp.id PX4 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 PX4 sing 367 n n O1 H1P PX4 sing 368 n n O2 P1 PX4 doub 369 n n P1 O3 PX4 sing 370 n n P1 O4 PX4 sing 371 n n O3 C1 PX4 sing 372 n n C1 C2 PX4 sing 373 n n C1 H1 PX4 sing 374 n n C1 H2 PX4 sing 375 n n C2 N1 PX4 sing 376 n n C2 H3 PX4 sing 377 n n C2 H4 PX4 sing 378 n n N1 C3 PX4 sing 379 n n N1 C4 PX4 sing 380 n n N1 C5 PX4 sing 381 n n C3 H5 PX4 sing 382 n n C3 H6 PX4 sing 383 n n C3 H7 PX4 sing 384 n n C4 H8 PX4 sing 385 n n C4 H9 PX4 sing 386 n n C4 H10 PX4 sing 387 n n C5 H11 PX4 sing 388 n n C5 H12 PX4 sing 389 n n C5 H13 PX4 sing 390 n n O4 C6 PX4 sing 391 n n C6 C7 PX4 sing 392 n n C6 H14 PX4 sing 393 n n C6 H15 PX4 sing 394 n n C7 C8 PX4 sing 395 n n C7 O7 PX4 sing 396 n n C7 H16 PX4 sing 397 n n C8 O5 PX4 sing 398 n n C8 H17 PX4 sing 399 n n C8 H18 PX4 sing 400 n n O5 C9 PX4 sing 401 n n C9 O6 PX4 doub 402 n n C9 C10 PX4 sing 403 n n C10 C11 PX4 sing 404 n n C10 H19 PX4 sing 405 n n C10 H20 PX4 sing 406 n n C11 C12 PX4 sing 407 n n C11 H21 PX4 sing 408 n n C11 H22 PX4 sing 409 n n C12 C13 PX4 sing 410 n n C12 H23 PX4 sing 411 n n C12 H24 PX4 sing 412 n n C13 C14 PX4 sing 413 n n C13 H25 PX4 sing 414 n n C13 H26 PX4 sing 415 n n C14 C15 PX4 sing 416 n n C14 H27 PX4 sing 417 n n C14 H28 PX4 sing 418 n n C15 C16 PX4 sing 419 n n C15 H29 PX4 sing 420 n n C15 H30 PX4 sing 421 n n C16 C17 PX4 sing 422 n n C16 H31 PX4 sing 423 n n C16 H32 PX4 sing 424 n n C17 C18 PX4 sing 425 n n C17 H33 PX4 sing 426 n n C17 H34 PX4 sing 427 n n C18 C19 PX4 sing 428 n n C18 H35 PX4 sing 429 n n C18 H36 PX4 sing 430 n n C19 C20 PX4 sing 431 n n C19 H37 PX4 sing 432 n n C19 H38 PX4 sing 433 n n C20 C21 PX4 sing 434 n n C20 H39 PX4 sing 435 n n C20 H40 PX4 sing 436 n n C21 C22 PX4 sing 437 n n C21 H41 PX4 sing 438 n n C21 H42 PX4 sing 439 n n C22 H43 PX4 sing 440 n n C22 H44 PX4 sing 441 n n C22 H45 PX4 sing 442 n n O7 C23 PX4 sing 443 n n C23 O8 PX4 doub 444 n n C23 C24 PX4 sing 445 n n C24 C25 PX4 sing 446 n n C24 H46 PX4 sing 447 n n C24 H47 PX4 sing 448 n n C25 C26 PX4 sing 449 n n C25 H48 PX4 sing 450 n n C25 H49 PX4 sing 451 n n C26 C27 PX4 sing 452 n n C26 H50 PX4 sing 453 n n C26 H51 PX4 sing 454 n n C27 C28 PX4 sing 455 n n C27 H52 PX4 sing 456 n n C27 H53 PX4 sing 457 n n C28 C29 PX4 sing 458 n n C28 H54 PX4 sing 459 n n C28 H55 PX4 sing 460 n n C29 C30 PX4 sing 461 n n C29 H56 PX4 sing 462 n n C29 H57 PX4 sing 463 n n C30 C31 PX4 sing 464 n n C30 H58 PX4 sing 465 n n C30 H59 PX4 sing 466 n n C31 C32 PX4 sing 467 n n C31 H60 PX4 sing 468 n n C31 H61 PX4 sing 469 n n C32 C33 PX4 sing 470 n n C32 H62 PX4 sing 471 n n C32 H63 PX4 sing 472 n n C33 C34 PX4 sing 473 n n C33 H64 PX4 sing 474 n n C33 H65 PX4 sing 475 n n C34 C35 PX4 sing 476 n n C34 H66 PX4 sing 477 n n C34 H67 PX4 sing 478 n n C35 C36 PX4 sing 479 n n C35 H68 PX4 sing 480 n n C35 H69 PX4 sing 481 n n C36 H70 PX4 sing 482 n n C36 H71 PX4 sing 483 n n C36 H72 PX4 sing 484 n n # _atom_sites.entry_id 6MWA _atom_sites.fract_transf_matrix[1][1] 0.008015 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005269 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PX4 B 1 2301 1 PX4 PX4 . C 2 PX4 B 1 2302 2 PX4 PX4 . D 2 PX4 B 1 2303 3 PX4 PX4 . E 2 PX4 B 1 2304 4 PX4 PX4 . F 3 SO4 B 1 2305 1 SO4 SO4 . G 4 CPS B 1 2306 1 CPS 1N7 . H 4 CPS B 1 2307 2 CPS 1N7 . I 5 HOH B 1 2401 12 HOH HOH . I 5 HOH B 2 2402 33 HOH HOH . I 5 HOH B 3 2403 38 HOH HOH . I 5 HOH B 4 2404 34 HOH HOH . I 5 HOH B 5 2405 36 HOH HOH . I 5 HOH B 6 2406 6 HOH HOH . I 5 HOH B 7 2407 23 HOH HOH . I 5 HOH B 8 2408 3 HOH HOH . I 5 HOH B 9 2409 1 HOH HOH . I 5 HOH B 10 2410 8 HOH HOH . I 5 HOH B 11 2411 21 HOH HOH . I 5 HOH B 12 2412 11 HOH HOH . I 5 HOH B 13 2413 17 HOH HOH . I 5 HOH B 14 2414 13 HOH HOH . I 5 HOH B 15 2415 20 HOH HOH . I 5 HOH B 16 2416 19 HOH HOH . I 5 HOH B 17 2417 27 HOH HOH . I 5 HOH B 18 2418 37 HOH HOH . I 5 HOH B 19 2419 5 HOH HOH . I 5 HOH B 20 2420 26 HOH HOH . I 5 HOH B 21 2421 22 HOH HOH . I 5 HOH B 22 2422 30 HOH HOH . I 5 HOH B 23 2423 28 HOH HOH . I 5 HOH B 24 2424 31 HOH HOH . I 5 HOH B 25 2425 29 HOH HOH . I 5 HOH B 26 2426 15 HOH HOH . I 5 HOH B 27 2427 4 HOH HOH . I 5 HOH B 28 2428 10 HOH HOH . I 5 HOH B 29 2429 35 HOH HOH . I 5 HOH B 30 2430 9 HOH HOH . I 5 HOH B 31 2431 7 HOH HOH . I 5 HOH B 32 2432 16 HOH HOH . I 5 HOH B 33 2433 32 HOH HOH . I 5 HOH B 34 2434 25 HOH HOH . I 5 HOH B 35 2435 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PX4 . . . C 2 -35.617 -74.594 -87.94 1 105.7 ? O1 PX4 2302 B 1 HETATM 2 O O2 PX4 . . . C 2 -34.259 -76.344 -86.899 1 107.4 ? O2 PX4 2302 B 1 HETATM 3 P P1 PX4 . . . C 2 -35.67 -75.94 -87.256 1 98.17 ? P1 PX4 2302 B 1 HETATM 4 O O3 PX4 . . . C 2 -36.287 -77.087 -88.266 1 87.19 ? O3 PX4 2302 B 1 HETATM 5 O O4 PX4 . . . C 2 -36.6 -75.829 -85.889 1 99.92 ? O4 PX4 2302 B 1 HETATM 6 C C6 PX4 . . . C 2 -36.705 -74.587 -85.244 1 101.07 ? C6 PX4 2302 B 1 HETATM 7 C C7 PX4 . . . C 2 -37.107 -74.714 -83.765 1 96.34 ? C7 PX4 2302 B 1 HETATM 8 C C8 PX4 . . . C 2 -38.523 -74.165 -83.547 1 87.73 ? C8 PX4 2302 B 1 HETATM 9 O O5 PX4 . . . C 2 -38.451 -72.823 -83.162 1 85.86 ? O5 PX4 2302 B 1 HETATM 10 C C9 PX4 . . . C 2 -37.896 -72.62 -81.891 1 104.77 ? C9 PX4 2302 B 1 HETATM 11 O O6 PX4 . . . C 2 -36.842 -72.087 -81.784 1 115.94 ? O6 PX4 2302 B 1 HETATM 12 C C10 PX4 . . . C 2 -38.649 -73.079 -80.642 1 99.99 ? C10 PX4 2302 B 1 HETATM 13 C C11 PX4 . . . C 2 -37.762 -72.995 -79.406 1 101.83 ? C11 PX4 2302 B 1 HETATM 14 C C12 PX4 . . . C 2 -38.47 -73.684 -78.236 1 103.43 ? C12 PX4 2302 B 1 HETATM 15 C C13 PX4 . . . C 2 -37.969 -73.135 -76.9 1 91.79 ? C13 PX4 2302 B 1 HETATM 16 C C14 PX4 . . . C 2 -39.079 -73.246 -75.856 1 89.61 ? C14 PX4 2302 B 1 HETATM 17 C C15 PX4 . . . C 2 -38.603 -74.054 -74.65 1 89.46 ? C15 PX4 2302 B 1 HETATM 18 C C16 PX4 . . . C 2 -39.726 -74.118 -73.618 1 88.45 ? C16 PX4 2302 B 1 HETATM 19 C C17 PX4 . . . C 2 -39.138 -74.31 -72.222 1 86.65 ? C17 PX4 2302 B 1 HETATM 20 C C18 PX4 . . . C 2 -39.941 -75.364 -71.464 1 77.68 ? C18 PX4 2302 B 1 HETATM 21 C C19 PX4 . . . C 2 -39.667 -75.217 -69.972 1 75.97 ? C19 PX4 2302 B 1 HETATM 22 C C20 PX4 . . . C 2 -40.136 -76.471 -69.235 1 84.62 ? C20 PX4 2302 B 1 HETATM 23 C C21 PX4 . . . C 2 -40.698 -76.074 -67.871 1 86.34 ? C21 PX4 2302 B 1 HETATM 24 C C22 PX4 . . . C 2 -40.087 -76.937 -66.772 1 89.98 ? C22 PX4 2302 B 1 HETATM 25 O O7 PX4 . . . C 2 -37.051 -76.046 -83.323 1 99.65 ? O7 PX4 2302 B 1 HETATM 26 C C23 PX4 . . . C 2 -36.129 -76.267 -82.286 1 96.47 ? C23 PX4 2302 B 1 HETATM 27 O O8 PX4 . . . C 2 -35.151 -75.6 -82.221 1 108.36 ? O8 PX4 2302 B 1 HETATM 28 C C24 PX4 . . . C 2 -36.369 -77.346 -81.232 1 83.01 ? C24 PX4 2302 B 1 HETATM 29 C C25 PX4 . . . C 2 -35.968 -76.757 -79.873 1 88.53 ? C25 PX4 2302 B 1 HETATM 30 C C26 PX4 . . . C 2 -36.105 -77.76 -78.723 1 75.64 ? C26 PX4 2302 B 1 HETATM 31 C C27 PX4 . . . C 2 -35.509 -77.124 -77.465 1 78.38 ? C27 PX4 2302 B 1 HETATM 32 C C28 PX4 . . . C 2 -35.835 -77.95 -76.217 1 82.48 ? C28 PX4 2302 B 1 HETATM 33 C C29 PX4 . . . C 2 -35.599 -77.121 -74.956 1 77.92 ? C29 PX4 2302 B 1 HETATM 34 C C30 PX4 . . . C 2 -36.715 -77.426 -73.955 1 84.99 ? C30 PX4 2302 B 1 HETATM 35 C C31 PX4 . . . C 2 -36.174 -77.596 -72.532 1 79.46 ? C31 PX4 2302 B 1 HETATM 36 C C32 PX4 . . . C 2 -37.318 -78.011 -71.602 1 79 ? C32 PX4 2302 B 1 HETATM 37 C C33 PX4 . . . C 2 -37.108 -79.444 -71.113 1 79.46 ? C33 PX4 2302 B 1 HETATM 38 C C34 PX4 . . . C 2 -38.173 -79.816 -70.081 1 75.35 ? C34 PX4 2302 B 1 HETATM 39 C C35 PX4 . . . C 2 -38.247 -81.339 -69.961 1 82.98 ? C35 PX4 2302 B 1 HETATM 40 C C36 PX4 . . . C 2 -39.642 -81.783 -69.519 1 82 ? C36 PX4 2302 B 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 40 #