data_6MWG # _model_server_result.job_id 3mMqEj0NCzZ4IjDWN8EQaQ _model_server_result.datetime_utc '2024-11-23 02:21:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mwg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2301}' # _entry.id 6MWG # _exptl.entry_id 6MWG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 678.94 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MWG _cell.length_a 124.175 _cell.length_b 124.175 _cell.length_c 189.868 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -124.175 -124.175 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -124.175 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -124.175 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C36 H73 N O8 P 1' _chem_comp.formula_weight 678.94 _chem_comp.id PX4 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 PX4 sing 373 n n O1 H1P PX4 sing 374 n n O2 P1 PX4 doub 375 n n P1 O3 PX4 sing 376 n n P1 O4 PX4 sing 377 n n O3 C1 PX4 sing 378 n n C1 C2 PX4 sing 379 n n C1 H1 PX4 sing 380 n n C1 H2 PX4 sing 381 n n C2 N1 PX4 sing 382 n n C2 H3 PX4 sing 383 n n C2 H4 PX4 sing 384 n n N1 C3 PX4 sing 385 n n N1 C4 PX4 sing 386 n n N1 C5 PX4 sing 387 n n C3 H5 PX4 sing 388 n n C3 H6 PX4 sing 389 n n C3 H7 PX4 sing 390 n n C4 H8 PX4 sing 391 n n C4 H9 PX4 sing 392 n n C4 H10 PX4 sing 393 n n C5 H11 PX4 sing 394 n n C5 H12 PX4 sing 395 n n C5 H13 PX4 sing 396 n n O4 C6 PX4 sing 397 n n C6 C7 PX4 sing 398 n n C6 H14 PX4 sing 399 n n C6 H15 PX4 sing 400 n n C7 C8 PX4 sing 401 n n C7 O7 PX4 sing 402 n n C7 H16 PX4 sing 403 n n C8 O5 PX4 sing 404 n n C8 H17 PX4 sing 405 n n C8 H18 PX4 sing 406 n n O5 C9 PX4 sing 407 n n C9 O6 PX4 doub 408 n n C9 C10 PX4 sing 409 n n C10 C11 PX4 sing 410 n n C10 H19 PX4 sing 411 n n C10 H20 PX4 sing 412 n n C11 C12 PX4 sing 413 n n C11 H21 PX4 sing 414 n n C11 H22 PX4 sing 415 n n C12 C13 PX4 sing 416 n n C12 H23 PX4 sing 417 n n C12 H24 PX4 sing 418 n n C13 C14 PX4 sing 419 n n C13 H25 PX4 sing 420 n n C13 H26 PX4 sing 421 n n C14 C15 PX4 sing 422 n n C14 H27 PX4 sing 423 n n C14 H28 PX4 sing 424 n n C15 C16 PX4 sing 425 n n C15 H29 PX4 sing 426 n n C15 H30 PX4 sing 427 n n C16 C17 PX4 sing 428 n n C16 H31 PX4 sing 429 n n C16 H32 PX4 sing 430 n n C17 C18 PX4 sing 431 n n C17 H33 PX4 sing 432 n n C17 H34 PX4 sing 433 n n C18 C19 PX4 sing 434 n n C18 H35 PX4 sing 435 n n C18 H36 PX4 sing 436 n n C19 C20 PX4 sing 437 n n C19 H37 PX4 sing 438 n n C19 H38 PX4 sing 439 n n C20 C21 PX4 sing 440 n n C20 H39 PX4 sing 441 n n C20 H40 PX4 sing 442 n n C21 C22 PX4 sing 443 n n C21 H41 PX4 sing 444 n n C21 H42 PX4 sing 445 n n C22 H43 PX4 sing 446 n n C22 H44 PX4 sing 447 n n C22 H45 PX4 sing 448 n n O7 C23 PX4 sing 449 n n C23 O8 PX4 doub 450 n n C23 C24 PX4 sing 451 n n C24 C25 PX4 sing 452 n n C24 H46 PX4 sing 453 n n C24 H47 PX4 sing 454 n n C25 C26 PX4 sing 455 n n C25 H48 PX4 sing 456 n n C25 H49 PX4 sing 457 n n C26 C27 PX4 sing 458 n n C26 H50 PX4 sing 459 n n C26 H51 PX4 sing 460 n n C27 C28 PX4 sing 461 n n C27 H52 PX4 sing 462 n n C27 H53 PX4 sing 463 n n C28 C29 PX4 sing 464 n n C28 H54 PX4 sing 465 n n C28 H55 PX4 sing 466 n n C29 C30 PX4 sing 467 n n C29 H56 PX4 sing 468 n n C29 H57 PX4 sing 469 n n C30 C31 PX4 sing 470 n n C30 H58 PX4 sing 471 n n C30 H59 PX4 sing 472 n n C31 C32 PX4 sing 473 n n C31 H60 PX4 sing 474 n n C31 H61 PX4 sing 475 n n C32 C33 PX4 sing 476 n n C32 H62 PX4 sing 477 n n C32 H63 PX4 sing 478 n n C33 C34 PX4 sing 479 n n C33 H64 PX4 sing 480 n n C33 H65 PX4 sing 481 n n C34 C35 PX4 sing 482 n n C34 H66 PX4 sing 483 n n C34 H67 PX4 sing 484 n n C35 C36 PX4 sing 485 n n C35 H68 PX4 sing 486 n n C35 H69 PX4 sing 487 n n C36 H70 PX4 sing 488 n n C36 H71 PX4 sing 489 n n C36 H72 PX4 sing 490 n n # _atom_sites.entry_id 6MWG _atom_sites.fract_transf_matrix[1][1] 0.008053 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008053 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PX4 B 1 2301 1 PX4 PX4 . C 2 PX4 B 1 2302 2 PX4 PX4 . D 2 PX4 B 1 2303 3 PX4 PX4 . E 2 PX4 B 1 2304 4 PX4 PX4 . F 3 ACT B 1 2305 1 ACT ACT . G 4 CPS B 1 2306 1 CPS CPS . H 4 CPS B 1 2307 2 CPS CPS . I 5 HOH B 1 2401 18 HOH HOH . I 5 HOH B 2 2402 24 HOH HOH . I 5 HOH B 3 2403 21 HOH HOH . I 5 HOH B 4 2404 3 HOH HOH . I 5 HOH B 5 2405 13 HOH HOH . I 5 HOH B 6 2406 9 HOH HOH . I 5 HOH B 7 2407 11 HOH HOH . I 5 HOH B 8 2408 5 HOH HOH . I 5 HOH B 9 2409 20 HOH HOH . I 5 HOH B 10 2410 22 HOH HOH . I 5 HOH B 11 2411 16 HOH HOH . I 5 HOH B 12 2412 6 HOH HOH . I 5 HOH B 13 2413 25 HOH HOH . I 5 HOH B 14 2414 15 HOH HOH . I 5 HOH B 15 2415 8 HOH HOH . I 5 HOH B 16 2416 2 HOH HOH . I 5 HOH B 17 2417 4 HOH HOH . I 5 HOH B 18 2418 17 HOH HOH . I 5 HOH B 19 2419 10 HOH HOH . I 5 HOH B 20 2420 23 HOH HOH . I 5 HOH B 21 2421 12 HOH HOH . I 5 HOH B 22 2422 1 HOH HOH . I 5 HOH B 23 2423 19 HOH HOH . I 5 HOH B 24 2424 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PX4 . . . B 2 -39.207 -67.076 -83.307 1 76.75 ? O1 PX4 2301 B 1 HETATM 2 O O2 PX4 . . . B 2 -39.727 -69.492 -83.465 1 76.95 ? O2 PX4 2301 B 1 HETATM 3 P P1 PX4 . . . B 2 -40.267 -68.135 -83.087 1 80.78 ? P1 PX4 2301 B 1 HETATM 4 O O3 PX4 . . . B 2 -41.573 -67.844 -84.047 1 76.2 ? O3 PX4 2301 B 1 HETATM 5 C C1 PX4 . . . B 2 -42.431 -66.78 -83.749 1 74.91 ? C1 PX4 2301 B 1 HETATM 6 C C2 PX4 . . . B 2 -43.35 -66.534 -84.947 1 85.3 ? C2 PX4 2301 B 1 HETATM 7 N N1 PX4 . . . B 2 -42.565 -66.409 -86.171 1 90.8 ? N1 PX4 2301 B 1 HETATM 8 C C3 PX4 . . . B 2 -41.284 -65.775 -85.895 1 76.68 ? C3 PX4 2301 B 1 HETATM 9 C C4 PX4 . . . B 2 -42.348 -67.727 -86.75 1 89.43 ? C4 PX4 2301 B 1 HETATM 10 C C5 PX4 . . . B 2 -43.297 -65.588 -87.121 1 95.64 ? C5 PX4 2301 B 1 HETATM 11 O O4 PX4 . . . B 2 -40.721 -68.132 -81.494 1 87.27 ? O4 PX4 2301 B 1 HETATM 12 C C6 PX4 . . . B 2 -40.024 -68.946 -80.592 1 91.1 ? C6 PX4 2301 B 1 HETATM 13 C C7 PX4 . . . B 2 -40.624 -68.869 -79.186 1 87.86 ? C7 PX4 2301 B 1 HETATM 14 C C8 PX4 . . . B 2 -42.142 -68.847 -79.289 1 76.09 ? C8 PX4 2301 B 1 HETATM 15 O O5 PX4 . . . B 2 -42.585 -67.539 -79.124 1 73.88 ? O5 PX4 2301 B 1 HETATM 16 C C9 PX4 . . . B 2 -43.821 -67.436 -78.471 1 77.24 ? C9 PX4 2301 B 1 HETATM 17 O O6 PX4 . . . B 2 -44.732 -66.918 -79.016 1 77.74 ? O6 PX4 2301 B 1 HETATM 18 C C10 PX4 . . . B 2 -44.021 -67.98 -77.059 1 75.76 ? C10 PX4 2301 B 1 HETATM 19 C C11 PX4 . . . B 2 -44.853 -66.981 -76.267 1 72.46 ? C11 PX4 2301 B 1 HETATM 20 C C12 PX4 . . . B 2 -45.844 -67.708 -75.365 1 72.66 ? C12 PX4 2301 B 1 HETATM 21 C C13 PX4 . . . B 2 -45.139 -68.242 -74.118 1 73.01 ? C13 PX4 2301 B 1 HETATM 22 C C14 PX4 . . . B 2 -46.144 -68.267 -72.974 1 71.85 ? C14 PX4 2301 B 1 HETATM 23 C C15 PX4 . . . B 2 -45.937 -69.491 -72.09 1 74.21 ? C15 PX4 2301 B 1 HETATM 24 C C16 PX4 . . . B 2 -47.163 -69.637 -71.189 1 80.26 ? C16 PX4 2301 B 1 HETATM 25 C C17 PX4 . . . B 2 -46.743 -69.741 -69.724 1 81.26 ? C17 PX4 2301 B 1 HETATM 26 C C18 PX4 . . . B 2 -47.163 -68.477 -68.979 1 86.01 ? C18 PX4 2301 B 1 HETATM 27 C C19 PX4 . . . B 2 -48.685 -68.393 -68.953 1 93.98 ? C19 PX4 2301 B 1 HETATM 28 C C20 PX4 . . . B 2 -49.145 -67.616 -67.719 1 95.96 ? C20 PX4 2301 B 1 HETATM 29 C C21 PX4 . . . B 2 -49.016 -68.498 -66.48 1 95.8 ? C21 PX4 2301 B 1 HETATM 30 C C22 PX4 . . . B 2 -49.669 -67.808 -65.288 1 88.72 ? C22 PX4 2301 B 1 HETATM 31 O O7 PX4 . . . B 2 -40.231 -69.979 -78.422 1 97.17 ? O7 PX4 2301 B 1 HETATM 32 C C23 PX4 . . . B 2 -39.939 -69.674 -77.081 1 114.5 ? C23 PX4 2301 B 1 HETATM 33 O O8 PX4 . . . B 2 -39.01 -68.977 -76.839 1 125.97 ? O8 PX4 2301 B 1 HETATM 34 C C24 PX4 . . . B 2 -40.795 -70.219 -75.929 1 111.55 ? C24 PX4 2301 B 1 HETATM 35 C C25 PX4 . . . B 2 -40.853 -69.193 -74.791 1 107.51 ? C25 PX4 2301 B 1 HETATM 36 C C26 PX4 . . . B 2 -41.456 -69.827 -73.535 1 105.41 ? C26 PX4 2301 B 1 HETATM 37 C C27 PX4 . . . B 2 -41.055 -69.022 -72.299 1 100.85 ? C27 PX4 2301 B 1 HETATM 38 C C28 PX4 . . . B 2 -42.284 -68.665 -71.458 1 100.41 ? C28 PX4 2301 B 1 HETATM 39 C C29 PX4 . . . B 2 -41.846 -67.904 -70.203 1 101.77 ? C29 PX4 2301 B 1 HETATM 40 C C30 PX4 . . . B 2 -43.059 -67.534 -69.346 1 101.36 ? C30 PX4 2301 B 1 HETATM 41 C C31 PX4 . . . B 2 -43.216 -66.016 -69.29 1 99.07 ? C31 PX4 2301 B 1 HETATM 42 C C32 PX4 . . . B 2 -43.103 -65.554 -67.84 1 102.6 ? C32 PX4 2301 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 42 #