data_6MWW # _model_server_result.job_id MVkdt5gjQPNtdx323eFLiw _model_server_result.datetime_utc '2024-12-24 00:41:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6MWW # _exptl.entry_id 6MWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.417 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[3-(methylsulfonyl)phenoxy]-N-[(1R,3R,5R)-2-oxobicyclo[3.1.0]hexan-3-yl]butanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.17 _cell.angle_gamma 90 _cell.entry_id 6MWW _cell.length_a 50.892 _cell.length_b 63.581 _cell.length_c 51.797 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H21 N O5 S' _chem_comp.formula_weight 351.417 _chem_comp.id K5J _chem_comp.mon_nstd_flag . _chem_comp.name 4-[3-(methylsulfonyl)phenoxy]-N-[(1R,3R,5R)-2-oxobicyclo[3.1.0]hexan-3-yl]butanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C22 K5J sing 171 n n C21 C03 K5J sing 172 n n C22 C24 K5J sing 173 n n C22 C23 K5J sing 174 n n C24 C23 K5J sing 175 n n C03 N04 K5J sing 176 n n C03 C02 K5J sing 177 n n C23 C02 K5J sing 178 n n N04 C05 K5J sing 179 n n O20 C05 K5J doub 180 n n C15 S13 K5J sing 181 n n O16 S13 K5J doub 182 n n C05 C06 K5J sing 183 n n C02 O01 K5J doub 184 n n C06 C07 K5J sing 185 n n S13 O14 K5J doub 186 n n S13 C12 K5J sing 187 n n C11 C12 K5J doub 188 n y C11 C10 K5J sing 189 n y C12 C17 K5J sing 190 n y C07 C08 K5J sing 191 n n O09 C08 K5J sing 192 n n O09 C10 K5J sing 193 n n C10 C19 K5J doub 194 n y C17 C18 K5J doub 195 n y C19 C18 K5J sing 196 n y C15 H151 K5J sing 197 n n C15 H152 K5J sing 198 n n C15 H153 K5J sing 199 n n C17 H171 K5J sing 200 n n C21 H211 K5J sing 201 n n C21 H212 K5J sing 202 n n C22 H221 K5J sing 203 n n C24 H241 K5J sing 204 n n C24 H242 K5J sing 205 n n C03 H031 K5J sing 206 n n N04 H041 K5J sing 207 n n C06 H062 K5J sing 208 n n C06 H061 K5J sing 209 n n C07 H071 K5J sing 210 n n C07 H072 K5J sing 211 n n C08 H081 K5J sing 212 n n C08 H082 K5J sing 213 n n C11 H111 K5J sing 214 n n C18 H181 K5J sing 215 n n C19 H191 K5J sing 216 n n C23 H231 K5J sing 217 n n # _atom_sites.entry_id 6MWW _atom_sites.fract_transf_matrix[1][1] 0.019649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008007 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020847 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K5J A 1 301 999 K5J LIG . D 2 K5J B 1 301 999 K5J LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 K5J . . . D 2 -37.058 -14.597 109.241 1 27.8 ? C10 K5J 301 B 1 HETATM 2 C C15 K5J . . . D 2 -35.081 -16.862 112.538 1 36.42 ? C15 K5J 301 B 1 HETATM 3 C C17 K5J . . . D 2 -34.784 -16.179 108.888 1 28.78 ? C17 K5J 301 B 1 HETATM 4 C C21 K5J . . . D 2 -44.446 -10.874 113.161 1 15.55 ? C21 K5J 301 B 1 HETATM 5 C C22 K5J . . . D 2 -45.865 -10.485 112.775 1 15.27 ? C22 K5J 301 B 1 HETATM 6 C C24 K5J . . . D 2 -46.112 -9.064 112.334 1 18.15 ? C24 K5J 301 B 1 HETATM 7 O O01 K5J . . . D 2 -44.163 -10.309 109.632 1 22.06 ? O01 K5J 301 B 1 HETATM 8 C C02 K5J . . . D 2 -44.5 -10.286 110.795 1 20.25 ? C02 K5J 301 B 1 HETATM 9 C C03 K5J . . . D 2 -43.536 -10.459 111.979 1 19.88 ? C03 K5J 301 B 1 HETATM 10 N N04 K5J . . . D 2 -42.577 -11.475 111.563 1 23.09 ? N04 K5J 301 B 1 HETATM 11 C C05 K5J . . . D 2 -41.297 -11.169 111.079 1 27.06 ? C05 K5J 301 B 1 HETATM 12 C C06 K5J . . . D 2 -40.322 -12.268 110.678 1 27.04 ? C06 K5J 301 B 1 HETATM 13 C C07 K5J . . . D 2 -39.893 -12.272 109.193 1 27.25 ? C07 K5J 301 B 1 HETATM 14 C C08 K5J . . . D 2 -38.416 -12.636 108.951 1 26.04 ? C08 K5J 301 B 1 HETATM 15 O O09 K5J . . . D 2 -38.192 -13.926 109.481 1 26.56 ? O09 K5J 301 B 1 HETATM 16 C C11 K5J . . . D 2 -36.206 -14.893 110.305 1 28.94 ? C11 K5J 301 B 1 HETATM 17 C C12 K5J . . . D 2 -35.036 -15.637 110.162 1 28.83 ? C12 K5J 301 B 1 HETATM 18 S S13 K5J . . . D 2 -34.112 -15.998 111.498 1 29.19 ? S13 K5J 301 B 1 HETATM 19 O O14 K5J . . . D 2 -33.065 -16.862 111.162 1 35.68 ? O14 K5J 301 B 1 HETATM 20 O O16 K5J . . . D 2 -33.814 -14.831 112.189 1 30.49 ? O16 K5J 301 B 1 HETATM 21 C C18 K5J . . . D 2 -35.647 -15.934 107.811 1 29.09 ? C18 K5J 301 B 1 HETATM 22 C C19 K5J . . . D 2 -36.801 -15.164 107.987 1 28.82 ? C19 K5J 301 B 1 HETATM 23 O O20 K5J . . . D 2 -40.962 -9.992 111.013 1 30.08 ? O20 K5J 301 B 1 HETATM 24 C C23 K5J . . . D 2 -45.878 -10.123 111.281 1 18.45 ? C23 K5J 301 B 1 HETATM 25 H H151 K5J . . . D 2 -35.155 -16.42 113.558 1 37.67 ? H151 K5J 301 B 1 HETATM 26 H H152 K5J . . . D 2 -34.801 -17.871 112.817 1 37.3 ? H152 K5J 301 B 1 HETATM 27 H H153 K5J . . . D 2 -36.155 -16.932 112.312 1 36.88 ? H153 K5J 301 B 1 HETATM 28 H H171 K5J . . . D 2 -33.9 -16.8 108.691 1 28.68 ? H171 K5J 301 B 1 HETATM 29 H H211 K5J . . . D 2 -44.363 -11.955 113.417 1 15.29 ? H211 K5J 301 B 1 HETATM 30 H H212 K5J . . . D 2 -44.123 -10.352 114.07 1 14.39 ? H212 K5J 301 B 1 HETATM 31 H H221 K5J . . . D 2 -46.663 -11.031 113.217 1 15.08 ? H221 K5J 301 B 1 HETATM 32 H H241 K5J . . . D 2 -45.386 -8.287 112.506 1 19.09 ? H241 K5J 301 B 1 HETATM 33 H H242 K5J . . . D 2 -47.114 -8.665 112.403 1 18.51 ? H242 K5J 301 B 1 HETATM 34 H H031 K5J . . . D 2 -43.052 -9.497 112.228 1 20.1 ? H031 K5J 301 B 1 HETATM 35 H H041 K5J . . . D 2 -42.892 -12.434 111.638 1 23.55 ? H041 K5J 301 B 1 HETATM 36 H H062 K5J . . . D 2 -40.721 -13.259 110.971 1 27.42 ? H062 K5J 301 B 1 HETATM 37 H H061 K5J . . . D 2 -39.444 -12.122 111.341 1 26.53 ? H061 K5J 301 B 1 HETATM 38 H H071 K5J . . . D 2 -40.122 -11.295 108.761 1 27.9 ? H071 K5J 301 B 1 HETATM 39 H H072 K5J . . . D 2 -40.523 -12.978 108.647 1 26.88 ? H072 K5J 301 B 1 HETATM 40 H H081 K5J . . . D 2 -37.779 -11.893 109.45 1 26.05 ? H081 K5J 301 B 1 HETATM 41 H H082 K5J . . . D 2 -38.204 -12.642 107.868 1 25.46 ? H082 K5J 301 B 1 HETATM 42 H H111 K5J . . . D 2 -36.457 -14.511 111.287 1 28.75 ? H111 K5J 301 B 1 HETATM 43 H H181 K5J . . . D 2 -35.414 -16.33 106.811 1 29.62 ? H181 K5J 301 B 1 HETATM 44 H H191 K5J . . . D 2 -37.446 -14.98 107.103 1 28.96 ? H191 K5J 301 B 1 HETATM 45 H H231 K5J . . . D 2 -46.68 -10.416 110.604 1 18.52 ? H231 K5J 301 B 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 45 #