data_6MX4 # _model_server_result.job_id DifuX_cFLjH66azaEgAGmA _model_server_result.datetime_utc '2025-06-30 05:04:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mx4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":501}' # _entry.id 6MX4 # _exptl.entry_id 6MX4 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 221.208 _entity.id 5 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 720-meric 720 'complete icosahedral assembly' 1 ? dodecameric 12 'icosahedral asymmetric unit' 2 ? 60-meric 60 'icosahedral pentamer' 3 ? 72-meric 72 'icosahedral 23 hexamer' 4 ? dodecameric 12 'icosahedral asymmetric unit, std point frame' 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 1 (1-60) A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 3 (1-5) A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 4 (1,2,6,10,23,24) A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 5 P # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.587785 -0.809017 0 0.688191 0.5 0.525732 -0.425326 -0.309017 0.850651 100.66912 -779.90315 -52.9246 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.309017 -0.951057 0 0.951057 0.309017 0.000001 0 -0.000001 1 747.19387 -118.34413 0.00049 3 'point symmetry operation' ? ? -0.809017 -0.587785 -0.000001 0.587785 -0.809017 0 -0.000001 0 1 1090.64143 555.70912 0.00071 4 'point symmetry operation' ? ? -0.809017 0.587785 -0.000001 -0.587785 -0.809017 0 -0.000001 0 1 555.70983 1090.64108 0.00036 5 'point symmetry operation' ? ? 0.309017 0.951057 0 -0.951057 0.309017 -0.000001 0 0.000001 1 -118.34365 747.19395 -0.00008 6 'point symmetry operation' ? ? -0.638196 0.262866 -0.723608 0.262866 -0.809017 -0.525731 -0.723608 -0.525731 0.447213 955.10041 942.78921 820.03932 7 'point symmetry operation' ? ? 0.052787 0.688191 -0.723607 -0.688191 -0.5 -0.525732 -0.723607 0.525732 0.447213 447.13554 1234.94316 341.58161 8 'point symmetry operation' ? ? 0.670821 0.162459 -0.723607 -0.688191 0.5 -0.525732 0.276393 0.850651 0.447213 405.13425 779.90315 -261.31017 9 'point symmetry operation' ? ? 0.361803 -0.587785 -0.723607 0.262866 0.809017 -0.525731 0.894427 0 0.447214 887.1409 206.51901 -155.46008 10 'point symmetry operation' ? ? -0.447213 -0.525731 -0.723607 0.850651 0 -0.525731 0.276393 -0.850651 0.447213 1227.03868 307.18814 512.85066 11 'point symmetry operation' ? ? -0.052787 0.688191 0.723607 0.688191 -0.5 0.525732 0.723607 0.525732 -0.447213 -163.36406 130.17686 90.0406 12 'point symmetry operation' ? ? 0.638196 0.262866 0.723608 -0.262866 -0.809017 0.525731 0.723608 -0.525731 -0.447213 -284.24941 703.561 568.49789 13 'point symmetry operation' ? ? 0.447213 -0.525731 0.723607 -0.850651 0 0.525731 -0.276393 -0.850651 -0.447213 161.49818 602.89188 1171.38994 14 'point symmetry operation' ? ? -0.361803 -0.587785 0.723607 -0.262866 0.809017 0.525731 -0.894427 0 -0.447214 557.8707 -32.7092 1065.54043 15 'point symmetry operation' ? ? -0.670821 0.162459 0.723607 0.688191 0.5 0.525732 -0.276393 0.850651 -0.447213 357.09479 -324.86315 397.22978 16 'point symmetry operation' ? ? -0.309017 -0.951057 0 -0.951057 0.309017 -0.000001 0 -0.000001 -1 1028.42364 747.19395 910.08008 17 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 910.08 0 910.08 18 'point symmetry operation' ? ? -0.309017 0.951057 0 0.951057 0.309017 0.000001 0 0.000001 -1 162.88612 -118.34413 910.07952 19 'point symmetry operation' ? ? 0.809017 0.587785 0.000001 0.587785 -0.809017 0 0.000001 0 -1 -180.56144 555.70913 910.07929 20 'point symmetry operation' ? ? 0.809017 -0.587785 0.000001 -0.587785 -0.809017 0 0.000001 0 -1 354.37017 1090.64108 910.07964 21 'point symmetry operation' ? ? -0.138197 -0.951057 0.276393 0.425326 -0.309017 -0.850651 0.894427 -0.000001 0.447214 824.9243 789.19479 -155.46012 22 'point symmetry operation' ? ? -0.947214 -0.162459 0.276392 -0.162459 -0.5 -0.850651 0.276392 -0.850651 0.447214 834.21616 1143.56568 512.8504 23 'point symmetry operation' ? ? -0.447213 0.850651 0.276393 -0.525731 0 -0.850651 -0.723607 -0.525731 0.447213 145.68994 1081.34875 820.03879 24 'point symmetry operation' ? ? 0.670821 0.688191 0.276393 -0.162459 0.5 -0.850651 -0.723607 0.525732 0.447213 -289.13454 688.52568 341.58114 25 'point symmetry operation' ? ? 0.861803 -0.425326 0.276393 0.425326 0.309017 -0.850651 0.276393 0.850651 0.447214 130.65539 507.9646 -261.31035 26 'point symmetry operation' ? ? -0.361803 0.587785 0.723607 0.262866 0.809017 -0.525731 -0.894427 0 -0.447214 22.9391 206.51902 1065.54008 27 'point symmetry operation' ? ? 0.447213 0.525731 0.723607 0.850651 0 -0.525731 -0.276393 0.850651 -0.447213 -316.95868 307.18814 397.22934 28 'point symmetry operation' ? ? 0.638196 -0.262866 0.723608 0.262866 -0.809017 -0.525731 0.723608 0.525731 -0.447213 -45.02041 942.78921 90.04067 29 'point symmetry operation' ? ? -0.052787 -0.688191 0.723607 -0.688191 -0.5 -0.525732 0.723607 -0.525732 -0.447213 462.94446 1234.94316 568.49838 30 'point symmetry operation' ? ? -0.670821 -0.162459 0.723607 -0.688191 0.5 -0.525732 -0.276393 -0.850651 -0.447213 504.94574 779.90316 1171.39017 31 'point symmetry operation' ? ? -0.447213 0.525731 -0.723607 -0.850651 0 0.525731 0.276393 0.850651 0.447213 748.58181 602.89187 -261.30994 32 'point symmetry operation' ? ? 0.361803 0.587785 -0.723607 -0.262866 0.809017 0.525731 0.894427 0 0.447214 352.20929 -32.7092 -155.46042 33 'point symmetry operation' ? ? 0.670821 -0.162459 -0.723607 0.688191 0.5 0.525732 0.276393 -0.850651 0.447213 552.9852 -324.86315 512.85023 34 'point symmetry operation' ? ? 0.052787 -0.688191 -0.723607 0.688191 -0.5 0.525732 -0.723607 -0.525732 0.447213 1073.44406 130.17686 820.0394 35 'point symmetry operation' ? ? -0.638196 -0.262866 -0.723608 -0.262866 -0.809017 0.525731 -0.723607 0.525731 0.447213 1194.32941 703.56099 341.5821 36 'point symmetry operation' ? ? 0.947214 -0.162459 -0.276392 0.162459 -0.5 0.850651 -0.276392 -0.850651 -0.447214 223.71478 221.55434 1171.38998 37 'point symmetry operation' ? ? 0.138197 -0.951057 -0.276393 -0.425326 -0.309017 0.850651 -0.894427 -0.000001 -0.447214 950.69322 402.11541 1065.54068 38 'point symmetry operation' ? ? -0.861803 -0.425326 -0.276393 -0.425326 0.309017 0.850651 -0.276393 0.850651 -0.447214 1166.50526 120.88521 397.2303 39 'point symmetry operation' ? ? -0.670821 0.688191 -0.276393 0.162459 0.5 0.850651 0.723607 0.525732 -0.447213 572.90601 -233.48567 90.04108 40 'point symmetry operation' ? ? 0.447213 0.850651 -0.276393 0.525731 0 0.850651 0.723607 -0.525731 -0.447213 -9.77055 -171.26873 568.49808 41 'point symmetry operation' ? ? -0.138197 0.425326 0.894427 -0.951057 -0.309017 -0.000001 0.276393 -0.850651 0.447214 -82.61498 1028.42414 512.84981 42 'point symmetry operation' ? ? 0.361803 0.262866 0.894427 -0.587785 0.809017 0 -0.723607 -0.525731 0.447214 -236.20959 354.37089 820.03855 43 'point symmetry operation' ? ? 0.361803 -0.262866 0.894427 0.587785 0.809017 0 -0.723607 0.525731 0.447214 3.01941 -180.56107 341.58133 44 'point symmetry operation' ? ? -0.138197 -0.425326 0.894427 0.951057 -0.309017 0.000001 0.276393 0.850651 0.447214 304.46568 162.88606 -261.31023 45 'point symmetry operation' ? ? -0.447215 0 0.894427 0 -1 0 0.894427 0 0.447215 251.54072 910.08001 -155.46049 46 'point symmetry operation' ? ? -0.447213 -0.850651 0.276393 0.525731 0 0.850651 -0.723607 0.525731 0.447213 919.85054 -171.26873 341.58193 47 'point symmetry operation' ? ? -0.947214 0.162459 0.276392 0.162459 -0.5 0.850651 0.276392 0.850651 0.447214 686.36521 221.55433 -261.30998 48 'point symmetry operation' ? ? -0.138197 0.951057 0.276393 -0.425326 -0.309017 0.850651 0.894427 0.000001 0.447214 -40.61322 402.1154 -155.46068 49 'point symmetry operation' ? ? 0.861803 0.425326 0.276393 -0.425326 0.309017 0.850651 0.276393 -0.850651 0.447214 -256.42527 120.88522 512.8497 50 'point symmetry operation' ? ? 0.670821 -0.688191 0.276393 0.162459 0.5 0.850651 -0.723607 -0.525732 0.447213 337.17398 -233.48567 820.03892 51 'point symmetry operation' ? ? 0.947214 0.162459 -0.276392 -0.162459 -0.5 -0.850651 -0.276392 0.850651 -0.447214 75.86383 1143.56568 397.22959 52 'point symmetry operation' ? ? 0.447213 -0.850651 -0.276393 -0.525731 0 -0.850651 0.723607 0.525731 -0.447213 764.39006 1081.34874 90.0412 53 'point symmetry operation' ? ? -0.670821 -0.688191 -0.276393 -0.162459 0.5 -0.850651 0.723607 -0.525732 -0.447213 1199.21453 688.52567 568.49886 54 'point symmetry operation' ? ? -0.861803 0.425326 -0.276393 0.425326 0.309017 -0.850651 -0.276393 -0.850651 -0.447214 779.42461 507.96461 1171.39035 55 'point symmetry operation' ? ? 0.138197 0.951057 -0.276393 0.425326 -0.309017 -0.850651 -0.894427 0.000001 -0.447214 85.1557 789.1948 1065.54011 56 'point symmetry operation' ? ? -0.361803 0.262866 -0.894427 0.587785 0.809017 0 0.723607 -0.525731 -0.447214 907.06059 -180.56107 568.49867 57 'point symmetry operation' ? ? 0.138197 0.425326 -0.894427 0.951057 -0.309017 0.000001 -0.276393 -0.850651 -0.447214 605.61432 162.88606 1171.39023 58 'point symmetry operation' ? ? 0.447215 0 -0.894427 0 -1 0 -0.894427 0 -0.447215 658.53927 910.08001 1065.54049 59 'point symmetry operation' ? ? 0.138197 -0.425326 -0.894427 -0.951057 -0.309017 -0.000001 -0.276393 0.850651 -0.447214 992.69497 1028.42414 397.23019 60 'point symmetry operation' ? ? -0.361803 -0.262866 -0.894427 -0.587785 0.809017 0 0.723607 0.525731 -0.447214 1146.28959 354.37088 90.04145 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 2 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n M NAG 1 M 1 NAG A 1001 NAG 4 n M NAG 2 M 2 NAG A 1002 NAG 4 n M NAG 3 M 3 NAG A 1003 NAG 4 n N NAG 1 N 1 NAG D 1001 NAG 4 n N NAG 2 N 2 NAG D 1002 NAG 4 n N NAG 3 N 3 NAG D 1003 NAG 4 n O NAG 1 O 1 NAG G 1001 NAG 4 n O NAG 2 O 2 NAG G 1002 NAG 4 n O NAG 3 O 3 NAG G 1003 NAG 4 n P NAG 1 P 1 NAG J 1001 NAG 4 n P NAG 2 P 2 NAG J 1002 NAG 4 n P NAG 3 P 3 NAG J 1003 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 49 A CYS 49 1_555 A SG CYS 114 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf2 A SG CYS 62 A CYS 62 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 63 A CYS 63 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 68 A CYS 68 1_555 A SG CYS 78 A CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 260 A CYS 260 1_555 A SG CYS 272 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 302 A CYS 302 1_555 A SG CYS 377 A CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 307 A CYS 307 1_555 A SG CYS 381 A CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf8 A SG CYS 329 A CYS 329 1_555 A SG CYS 371 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf9 B SG CYS 19 B CYS 19 1_555 B SG CYS 122 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 B SG CYS 22 B CYS 22 1_555 B SG CYS 27 B CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 B SG CYS 89 B CYS 89 1_555 B SG CYS 103 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf12 B SG CYS 150 B CYS 150 1_555 B SG CYS 263 B CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf13 B SG CYS 199 B CYS 199 1_555 B SG CYS 223 B CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf14 B SG CYS 201 B CYS 201 1_555 B SG CYS 217 B CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf15 D SG CYS 49 D CYS 49 1_555 D SG CYS 114 D CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf16 D SG CYS 62 D CYS 62 1_555 D SG CYS 94 D CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf17 D SG CYS 63 D CYS 63 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf18 D SG CYS 68 D CYS 68 1_555 D SG CYS 78 D CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf19 D SG CYS 260 D CYS 260 1_555 D SG CYS 272 D CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf20 D SG CYS 302 D CYS 302 1_555 D SG CYS 377 D CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf21 D SG CYS 307 D CYS 307 1_555 D SG CYS 381 D CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf22 D SG CYS 329 D CYS 329 1_555 D SG CYS 371 D CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf23 E SG CYS 19 E CYS 19 1_555 E SG CYS 122 E CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf24 E SG CYS 22 E CYS 22 1_555 E SG CYS 27 E CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf25 E SG CYS 89 E CYS 89 1_555 E SG CYS 103 E CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf26 E SG CYS 150 E CYS 150 1_555 E SG CYS 263 E CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf27 E SG CYS 199 E CYS 199 1_555 E SG CYS 223 E CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf28 E SG CYS 201 E CYS 201 1_555 E SG CYS 217 E CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf29 G SG CYS 49 G CYS 49 1_555 G SG CYS 114 G CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf30 G SG CYS 62 G CYS 62 1_555 G SG CYS 94 G CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf31 G SG CYS 63 G CYS 63 1_555 G SG CYS 96 G CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf32 G SG CYS 68 G CYS 68 1_555 G SG CYS 78 G CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf33 G SG CYS 260 G CYS 260 1_555 G SG CYS 272 G CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf34 G SG CYS 302 G CYS 302 1_555 G SG CYS 377 G CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf35 G SG CYS 307 G CYS 307 1_555 G SG CYS 381 G CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf36 G SG CYS 329 G CYS 329 1_555 G SG CYS 371 G CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf37 H SG CYS 19 H CYS 19 1_555 H SG CYS 122 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf38 H SG CYS 22 H CYS 22 1_555 H SG CYS 27 H CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf39 H SG CYS 89 H CYS 89 1_555 H SG CYS 103 H CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf40 H SG CYS 150 H CYS 150 1_555 H SG CYS 263 H CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf41 H SG CYS 199 H CYS 199 1_555 H SG CYS 223 H CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf42 H SG CYS 201 H CYS 201 1_555 H SG CYS 217 H CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf43 J SG CYS 49 J CYS 49 1_555 J SG CYS 114 J CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf44 J SG CYS 62 J CYS 62 1_555 J SG CYS 94 J CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf45 J SG CYS 63 J CYS 63 1_555 J SG CYS 96 J CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf46 J SG CYS 68 J CYS 68 1_555 J SG CYS 78 J CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf47 J SG CYS 260 J CYS 260 1_555 J SG CYS 272 J CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf48 J SG CYS 302 J CYS 302 1_555 J SG CYS 377 J CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf49 J SG CYS 307 J CYS 307 1_555 J SG CYS 381 J CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf50 J SG CYS 329 J CYS 329 1_555 J SG CYS 371 J CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf51 K SG CYS 19 K CYS 19 1_555 K SG CYS 122 K CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf52 K SG CYS 22 K CYS 22 1_555 K SG CYS 27 K CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf53 K SG CYS 89 K CYS 89 1_555 K SG CYS 103 K CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf54 K SG CYS 150 K CYS 150 1_555 K SG CYS 263 K CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf55 K SG CYS 199 K CYS 199 1_555 K SG CYS 223 K CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf56 K SG CYS 201 K CYS 201 1_555 K SG CYS 217 K CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 134 A ASN 134 1_555 M C1 NAG . M NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale2 B ND2 ASN 315 B ASN 315 1_555 Q C1 NAG . B NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale3 D ND2 ASN 134 D ASN 134 1_555 N C1 NAG . N NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale4 E ND2 ASN 315 E ASN 315 1_555 R C1 NAG . E NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale5 G ND2 ASN 134 G ASN 134 1_555 O C1 NAG . O NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale6 H ND2 ASN 315 H ASN 315 1_555 S C1 NAG . H NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale7 J ND2 ASN 134 J ASN 134 1_555 P C1 NAG . P NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale8 K ND2 ASN 315 K ASN 315 1_555 T C1 NAG . K NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale9 M O4 NAG . M NAG 1 1_555 M C1 NAG . M NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale10 M O4 NAG . M NAG 2 1_555 M C1 NAG . M NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale11 N O4 NAG . N NAG 1 1_555 N C1 NAG . N NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale12 N O4 NAG . N NAG 2 1_555 N C1 NAG . N NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale13 O O4 NAG . O NAG 1 1_555 O C1 NAG . O NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale14 O O4 NAG . O NAG 2 1_555 O C1 NAG . O NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale15 P O4 NAG . P NAG 1 1_555 P C1 NAG . P NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale16 P O4 NAG . P NAG 2 1_555 P C1 NAG . P NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 235 n n C1 O1 NAG sing 236 n n C1 O5 NAG sing 237 n n C1 H1 NAG sing 238 n n C2 C3 NAG sing 239 n n C2 N2 NAG sing 240 n n C2 H2 NAG sing 241 n n C3 C4 NAG sing 242 n n C3 O3 NAG sing 243 n n C3 H3 NAG sing 244 n n C4 C5 NAG sing 245 n n C4 O4 NAG sing 246 n n C4 H4 NAG sing 247 n n C5 C6 NAG sing 248 n n C5 O5 NAG sing 249 n n C5 H5 NAG sing 250 n n C6 O6 NAG sing 251 n n C6 H61 NAG sing 252 n n C6 H62 NAG sing 253 n n C7 C8 NAG sing 254 n n C7 N2 NAG sing 255 n n C7 O7 NAG doub 256 n n C8 H81 NAG sing 257 n n C8 H82 NAG sing 258 n n C8 H83 NAG sing 259 n n N2 HN2 NAG sing 260 n n O1 HO1 NAG sing 261 n n O3 HO3 NAG sing 262 n n O4 HO4 NAG sing 263 n n O6 HO6 NAG sing 264 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6MX4 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 5 NAG B 1 501 1003 NAG NAG . R 5 NAG E 1 501 1003 NAG NAG . S 5 NAG H 1 501 1003 NAG NAG . T 5 NAG K 1 501 1003 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . S 5 442.361 365.419 692.219 1 41.14 0 C1 NAG 501 H 1 HETATM 2 C C2 NAG . . . S 5 441.013 365.014 691.656 1 41.14 0 C2 NAG 501 H 1 HETATM 3 C C3 NAG . . . S 5 440.202 366.261 691.35 1 41.14 0 C3 NAG 501 H 1 HETATM 4 C C4 NAG . . . S 5 440.09 367.124 692.599 1 41.14 0 C4 NAG 501 H 1 HETATM 5 C C5 NAG . . . S 5 441.469 367.389 693.199 1 41.14 0 C5 NAG 501 H 1 HETATM 6 C C6 NAG . . . S 5 441.399 368.094 694.532 1 41.14 0 C6 NAG 501 H 1 HETATM 7 C C7 NAG . . . S 5 441.015 362.869 690.366 1 41.14 0 C7 NAG 501 H 1 HETATM 8 C C8 NAG . . . S 5 440.621 362.139 691.62 1 41.14 0 C8 NAG 501 H 1 HETATM 9 N N2 NAG . . . S 5 441.173 364.202 690.455 1 41.14 0 N2 NAG 501 H 1 HETATM 10 O O3 NAG . . . S 5 438.904 365.896 690.895 1 41.14 0 O3 NAG 501 H 1 HETATM 11 O O4 NAG . . . S 5 439.484 368.367 692.267 1 41.14 0 O4 NAG 501 H 1 HETATM 12 O O5 NAG . . . S 5 442.169 366.153 693.418 1 41.14 0 O5 NAG 501 H 1 HETATM 13 O O6 NAG . . . S 5 442.275 369.212 694.578 1 41.14 0 O6 NAG 501 H 1 HETATM 14 O O7 NAG . . . S 5 441.178 362.277 689.306 1 41.14 0 O7 NAG 501 H 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 14 #