data_6MXE # _model_server_result.job_id JkxTlrNe4EEoivDcqIpnuQ _model_server_result.datetime_utc '2025-01-03 04:23:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 6MXE # _exptl.entry_id 6MXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 523.98 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(3S,4S)-2-(4-tert-butyl-3-chlorophenyl)-3-(2,3-dihydro-1,4-benzodioxin-6-yl)-7-fluoro-1-oxo-1,2,3,4-tetrahydroisoquinolin-4-yl]acetic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MXE _cell.length_a 69.85 _cell.length_b 77.91 _cell.length_c 124.35 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 52 B ASP 205 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 3.059 ? metalc ? metalc2 B OD2 ASP 52 B ASP 205 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc3 B O ALA 62 B ALA 215 1_555 F CA CA . B CA 404 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc4 B OE1 GLU 163 B GLU 316 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc5 B OE2 GLU 163 B GLU 316 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc6 B O ALA 165 B ALA 318 1_555 E CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc7 B OD1 ASP 167 B ASP 320 1_555 E CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc8 B OD2 ASP 167 B ASP 320 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc9 E CA CA . B CA 403 1_555 H O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc10 E CA CA . B CA 403 1_555 H O HOH . B HOH 512 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc11 F CA CA . B CA 404 1_555 H O HOH . B HOH 517 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? # _chem_comp.formula 'C29 H27 Cl F N O5' _chem_comp.formula_weight 523.98 _chem_comp.id K5S _chem_comp.mon_nstd_flag . _chem_comp.name '[(3S,4S)-2-(4-tert-butyl-3-chlorophenyl)-3-(2,3-dihydro-1,4-benzodioxin-6-yl)-7-fluoro-1-oxo-1,2,3,4-tetrahydroisoquinolin-4-yl]acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C5 K5S doub 173 n n C5 O K5S sing 174 n n C5 C4 K5S sing 175 n n C20 C19 K5S sing 176 n n C4 C3 K5S sing 177 n n C17 C16 K5S doub 178 n y C17 C18 K5S sing 179 n y C16 C15 K5S sing 180 n y C22 C19 K5S sing 181 n n C19 C18 K5S sing 182 n n C19 C21 K5S sing 183 n n C18 C23 K5S doub 184 n y C3 C6 K5S sing 185 n n C3 C2 K5S sing 186 n n C15 N K5S sing 187 n n C15 C24 K5S doub 188 n y C6 N K5S sing 189 n n C6 C7 K5S sing 190 n n N C25 K5S sing 191 n n C2 C1 K5S doub 192 n y C2 C26 K5S sing 193 n y C23 C24 K5S sing 194 n y C23 CL K5S sing 195 n n C25 O4 K5S doub 196 n n C25 C26 K5S sing 197 n n C1 C K5S sing 198 n y C26 C27 K5S doub 199 n y C C28 K5S doub 200 n y C27 C28 K5S sing 201 n y C7 C14 K5S doub 202 n y C7 C8 K5S sing 203 n y C14 C13 K5S sing 204 n y C28 F K5S sing 205 n n C8 C9 K5S doub 206 n y C13 O3 K5S sing 207 n n C13 C10 K5S doub 208 n y O3 C12 K5S sing 209 n n C9 C10 K5S sing 210 n y C10 O2 K5S sing 211 n n C12 C11 K5S sing 212 n n O2 C11 K5S sing 213 n n C H1 K5S sing 214 n n C27 H2 K5S sing 215 n n C1 H3 K5S sing 216 n n C24 H4 K5S sing 217 n n C22 H5 K5S sing 218 n n C22 H6 K5S sing 219 n n C22 H7 K5S sing 220 n n C21 H8 K5S sing 221 n n C21 H9 K5S sing 222 n n C21 H10 K5S sing 223 n n C20 H11 K5S sing 224 n n C20 H12 K5S sing 225 n n C20 H13 K5S sing 226 n n C17 H14 K5S sing 227 n n C16 H15 K5S sing 228 n n C6 H16 K5S sing 229 n n C3 H17 K5S sing 230 n n C4 H18 K5S sing 231 n n C4 H19 K5S sing 232 n n O H20 K5S sing 233 n n C14 H21 K5S sing 234 n n C9 H22 K5S sing 235 n n C8 H23 K5S sing 236 n n C12 H24 K5S sing 237 n n C12 H25 K5S sing 238 n n C11 H26 K5S sing 239 n n C11 H27 K5S sing 240 n n # _atom_sites.entry_id 6MXE _atom_sites.fract_transf_matrix[1][1] 0.014316 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K5S B 1 401 1 K5S UNL . D 2 K5S B 1 402 1 K5S UNL . E 3 CA B 1 403 1 CA CA . F 3 CA B 1 404 2 CA CA . G 4 HOH A 1 401 23 HOH HOH . G 4 HOH A 2 402 19 HOH HOH . G 4 HOH A 3 403 52 HOH HOH . G 4 HOH A 4 404 2 HOH HOH . G 4 HOH A 5 405 12 HOH HOH . G 4 HOH A 6 406 5 HOH HOH . G 4 HOH A 7 407 24 HOH HOH . G 4 HOH A 8 408 74 HOH HOH . G 4 HOH A 9 409 78 HOH HOH . G 4 HOH A 10 410 41 HOH HOH . G 4 HOH A 11 411 72 HOH HOH . G 4 HOH A 12 412 35 HOH HOH . G 4 HOH A 13 413 56 HOH HOH . G 4 HOH A 14 414 8 HOH HOH . G 4 HOH A 15 415 40 HOH HOH . G 4 HOH A 16 416 49 HOH HOH . G 4 HOH A 17 417 18 HOH HOH . G 4 HOH A 18 418 36 HOH HOH . G 4 HOH A 19 419 63 HOH HOH . G 4 HOH A 20 420 55 HOH HOH . G 4 HOH A 21 421 33 HOH HOH . G 4 HOH A 22 422 68 HOH HOH . G 4 HOH A 23 423 22 HOH HOH . G 4 HOH A 24 424 34 HOH HOH . G 4 HOH A 25 425 29 HOH HOH . G 4 HOH A 26 426 16 HOH HOH . G 4 HOH A 27 427 32 HOH HOH . G 4 HOH A 28 428 45 HOH HOH . G 4 HOH A 29 429 73 HOH HOH . G 4 HOH A 30 430 39 HOH HOH . G 4 HOH A 31 431 9 HOH HOH . G 4 HOH A 32 432 58 HOH HOH . H 4 HOH B 1 501 28 HOH HOH . H 4 HOH B 2 502 50 HOH HOH . H 4 HOH B 3 503 47 HOH HOH . H 4 HOH B 4 504 25 HOH HOH . H 4 HOH B 5 505 3 HOH HOH . H 4 HOH B 6 506 57 HOH HOH . H 4 HOH B 7 507 71 HOH HOH . H 4 HOH B 8 508 6 HOH HOH . H 4 HOH B 9 509 53 HOH HOH . H 4 HOH B 10 510 37 HOH HOH . H 4 HOH B 11 511 1 HOH HOH . H 4 HOH B 12 512 59 HOH HOH . H 4 HOH B 13 513 46 HOH HOH . H 4 HOH B 14 514 65 HOH HOH . H 4 HOH B 15 515 31 HOH HOH . H 4 HOH B 16 516 64 HOH HOH . H 4 HOH B 17 517 10 HOH HOH . H 4 HOH B 18 518 30 HOH HOH . H 4 HOH B 19 519 51 HOH HOH . H 4 HOH B 20 520 20 HOH HOH . H 4 HOH B 21 521 69 HOH HOH . H 4 HOH B 22 522 43 HOH HOH . H 4 HOH B 23 523 38 HOH HOH . H 4 HOH B 24 524 21 HOH HOH . H 4 HOH B 25 525 54 HOH HOH . H 4 HOH B 26 526 17 HOH HOH . H 4 HOH B 27 527 76 HOH HOH . H 4 HOH B 28 528 26 HOH HOH . H 4 HOH B 29 529 7 HOH HOH . H 4 HOH B 30 530 14 HOH HOH . H 4 HOH B 31 531 48 HOH HOH . H 4 HOH B 32 532 61 HOH HOH . H 4 HOH B 33 533 70 HOH HOH . H 4 HOH B 34 534 13 HOH HOH . H 4 HOH B 35 535 75 HOH HOH . H 4 HOH B 36 536 4 HOH HOH . H 4 HOH B 37 537 42 HOH HOH . H 4 HOH B 38 538 66 HOH HOH . H 4 HOH B 39 539 27 HOH HOH . H 4 HOH B 40 540 62 HOH HOH . H 4 HOH B 41 541 67 HOH HOH . H 4 HOH B 42 542 60 HOH HOH . H 4 HOH B 43 543 11 HOH HOH . H 4 HOH B 44 544 77 HOH HOH . H 4 HOH B 45 545 15 HOH HOH . H 4 HOH B 46 546 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F K5S . . . D 2 52.796 20.981 78.078 1 24.06 ? F K5S 402 B 1 HETATM 2 C C28 K5S . . . D 2 53.22 19.86 77.435 1 25.1 ? C28 K5S 402 B 1 HETATM 3 C C K5S . . . D 2 52.279 19.013 76.899 1 23.98 ? C K5S 402 B 1 HETATM 4 C C27 K5S . . . D 2 54.578 19.637 77.346 1 23.91 ? C27 K5S 402 B 1 HETATM 5 C C26 K5S . . . D 2 55.013 18.488 76.671 1 23.25 ? C26 K5S 402 B 1 HETATM 6 C C2 K5S . . . D 2 54.085 17.618 76.083 1 20.81 ? C2 K5S 402 B 1 HETATM 7 C C1 K5S . . . D 2 52.725 17.892 76.217 1 22.52 ? C1 K5S 402 B 1 HETATM 8 C C25 K5S . . . D 2 56.459 18.161 76.669 1 27.21 ? C25 K5S 402 B 1 HETATM 9 O O4 K5S . . . D 2 57.235 18.643 77.473 1 27.01 ? O4 K5S 402 B 1 HETATM 10 N N K5S . . . D 2 56.88 17.291 75.695 1 27.71 ? N K5S 402 B 1 HETATM 11 C C15 K5S . . . D 2 58.266 16.927 75.605 1 30.94 ? C15 K5S 402 B 1 HETATM 12 C C24 K5S . . . D 2 59.24 17.923 75.617 1 33.56 ? C24 K5S 402 B 1 HETATM 13 C C23 K5S . . . D 2 60.577 17.584 75.517 1 35.5 ? C23 K5S 402 B 1 HETATM 14 CL CL K5S . . . D 2 61.709 18.881 75.694 1 42.17 ? CL K5S 402 B 1 HETATM 15 C C18 K5S . . . D 2 60.995 16.258 75.351 1 34.91 ? C18 K5S 402 B 1 HETATM 16 C C19 K5S . . . D 2 62.485 15.859 75.111 1 36.62 ? C19 K5S 402 B 1 HETATM 17 C C22 K5S . . . D 2 63.37 16.151 76.324 1 37.67 ? C22 K5S 402 B 1 HETATM 18 C C21 K5S . . . D 2 63.067 16.61 73.91 1 33.96 ? C21 K5S 402 B 1 HETATM 19 C C20 K5S . . . D 2 62.665 14.36 74.848 1 33.14 ? C20 K5S 402 B 1 HETATM 20 C C17 K5S . . . D 2 60 15.283 75.352 1 32.09 ? C17 K5S 402 B 1 HETATM 21 C C16 K5S . . . D 2 58.657 15.599 75.49 1 30.93 ? C16 K5S 402 B 1 HETATM 22 C C6 K5S . . . D 2 55.974 16.727 74.67 1 25.97 ? C6 K5S 402 B 1 HETATM 23 C C3 K5S . . . D 2 54.585 16.383 75.355 1 26.16 ? C3 K5S 402 B 1 HETATM 24 C C4 K5S . . . D 2 54.703 15.2 76.332 1 27.83 ? C4 K5S 402 B 1 HETATM 25 C C5 K5S . . . D 2 54.96 13.865 75.684 1 32.41 ? C5 K5S 402 B 1 HETATM 26 O O1 K5S . . . D 2 54.941 12.903 76.537 1 37.64 ? O1 K5S 402 B 1 HETATM 27 O O K5S . . . D 2 55.16 13.694 74.496 1 31.7 ? O K5S 402 B 1 HETATM 28 C C7 K5S . . . D 2 55.853 17.588 73.424 1 27.24 ? C7 K5S 402 B 1 HETATM 29 C C14 K5S . . . D 2 55.157 17.091 72.324 1 29.49 ? C14 K5S 402 B 1 HETATM 30 C C13 K5S . . . D 2 54.977 17.869 71.194 1 28.02 ? C13 K5S 402 B 1 HETATM 31 C C10 K5S . . . D 2 55.491 19.177 71.163 1 28.01 ? C10 K5S 402 B 1 HETATM 32 C C9 K5S . . . D 2 56.203 19.676 72.246 1 24.38 ? C9 K5S 402 B 1 HETATM 33 C C8 K5S . . . D 2 56.385 18.872 73.363 1 22.2 ? C8 K5S 402 B 1 HETATM 34 O O3 K5S . . . D 2 54.296 17.32 70.14 1 27.41 ? O3 K5S 402 B 1 HETATM 35 C C12 K5S . . . D 2 54.357 18.079 68.917 1 23.05 ? C12 K5S 402 B 1 HETATM 36 C C11 K5S . . . D 2 54.258 19.532 69.17 1 26.48 ? C11 K5S 402 B 1 HETATM 37 O O2 K5S . . . D 2 55.263 20.016 70.093 1 27.52 ? O2 K5S 402 B 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #