data_6MXE # _model_server_result.job_id CkOmi2uPywi915Flz67ihw _model_server_result.datetime_utc '2025-01-03 04:24:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 6MXE # _exptl.entry_id 6MXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6MXE _cell.length_a 69.85 _cell.length_b 77.91 _cell.length_c 124.35 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 52 B ASP 205 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 3.059 ? metalc ? metalc2 B OD2 ASP 52 B ASP 205 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc3 B O ALA 62 B ALA 215 1_555 F CA CA . B CA 404 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc4 B OE1 GLU 163 B GLU 316 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc5 B OE2 GLU 163 B GLU 316 1_555 E CA CA . B CA 403 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc6 B O ALA 165 B ALA 318 1_555 E CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc7 B OD1 ASP 167 B ASP 320 1_555 E CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc8 B OD2 ASP 167 B ASP 320 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc9 E CA CA . B CA 403 1_555 H O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc10 E CA CA . B CA 403 1_555 H O HOH . B HOH 512 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc11 F CA CA . B CA 404 1_555 H O HOH . B HOH 517 3_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6MXE _atom_sites.fract_transf_matrix[1][1] 0.014316 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K5S B 1 401 1 K5S UNL . D 2 K5S B 1 402 1 K5S UNL . E 3 CA B 1 403 1 CA CA . F 3 CA B 1 404 2 CA CA . G 4 HOH A 1 401 23 HOH HOH . G 4 HOH A 2 402 19 HOH HOH . G 4 HOH A 3 403 52 HOH HOH . G 4 HOH A 4 404 2 HOH HOH . G 4 HOH A 5 405 12 HOH HOH . G 4 HOH A 6 406 5 HOH HOH . G 4 HOH A 7 407 24 HOH HOH . G 4 HOH A 8 408 74 HOH HOH . G 4 HOH A 9 409 78 HOH HOH . G 4 HOH A 10 410 41 HOH HOH . G 4 HOH A 11 411 72 HOH HOH . G 4 HOH A 12 412 35 HOH HOH . G 4 HOH A 13 413 56 HOH HOH . G 4 HOH A 14 414 8 HOH HOH . G 4 HOH A 15 415 40 HOH HOH . G 4 HOH A 16 416 49 HOH HOH . G 4 HOH A 17 417 18 HOH HOH . G 4 HOH A 18 418 36 HOH HOH . G 4 HOH A 19 419 63 HOH HOH . G 4 HOH A 20 420 55 HOH HOH . G 4 HOH A 21 421 33 HOH HOH . G 4 HOH A 22 422 68 HOH HOH . G 4 HOH A 23 423 22 HOH HOH . G 4 HOH A 24 424 34 HOH HOH . G 4 HOH A 25 425 29 HOH HOH . G 4 HOH A 26 426 16 HOH HOH . G 4 HOH A 27 427 32 HOH HOH . G 4 HOH A 28 428 45 HOH HOH . G 4 HOH A 29 429 73 HOH HOH . G 4 HOH A 30 430 39 HOH HOH . G 4 HOH A 31 431 9 HOH HOH . G 4 HOH A 32 432 58 HOH HOH . H 4 HOH B 1 501 28 HOH HOH . H 4 HOH B 2 502 50 HOH HOH . H 4 HOH B 3 503 47 HOH HOH . H 4 HOH B 4 504 25 HOH HOH . H 4 HOH B 5 505 3 HOH HOH . H 4 HOH B 6 506 57 HOH HOH . H 4 HOH B 7 507 71 HOH HOH . H 4 HOH B 8 508 6 HOH HOH . H 4 HOH B 9 509 53 HOH HOH . H 4 HOH B 10 510 37 HOH HOH . H 4 HOH B 11 511 1 HOH HOH . H 4 HOH B 12 512 59 HOH HOH . H 4 HOH B 13 513 46 HOH HOH . H 4 HOH B 14 514 65 HOH HOH . H 4 HOH B 15 515 31 HOH HOH . H 4 HOH B 16 516 64 HOH HOH . H 4 HOH B 17 517 10 HOH HOH . H 4 HOH B 18 518 30 HOH HOH . H 4 HOH B 19 519 51 HOH HOH . H 4 HOH B 20 520 20 HOH HOH . H 4 HOH B 21 521 69 HOH HOH . H 4 HOH B 22 522 43 HOH HOH . H 4 HOH B 23 523 38 HOH HOH . H 4 HOH B 24 524 21 HOH HOH . H 4 HOH B 25 525 54 HOH HOH . H 4 HOH B 26 526 17 HOH HOH . H 4 HOH B 27 527 76 HOH HOH . H 4 HOH B 28 528 26 HOH HOH . H 4 HOH B 29 529 7 HOH HOH . H 4 HOH B 30 530 14 HOH HOH . H 4 HOH B 31 531 48 HOH HOH . H 4 HOH B 32 532 61 HOH HOH . H 4 HOH B 33 533 70 HOH HOH . H 4 HOH B 34 534 13 HOH HOH . H 4 HOH B 35 535 75 HOH HOH . H 4 HOH B 36 536 4 HOH HOH . H 4 HOH B 37 537 42 HOH HOH . H 4 HOH B 38 538 66 HOH HOH . H 4 HOH B 39 539 27 HOH HOH . H 4 HOH B 40 540 62 HOH HOH . H 4 HOH B 41 541 67 HOH HOH . H 4 HOH B 42 542 60 HOH HOH . H 4 HOH B 43 543 11 HOH HOH . H 4 HOH B 44 544 77 HOH HOH . H 4 HOH B 45 545 15 HOH HOH . H 4 HOH B 46 546 44 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 73.603 _atom_site.Cartn_y 6.617 _atom_site.Cartn_z 95.196 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.31 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #