data_6MXG # _model_server_result.job_id zjiUCHYYdWLtBChxIhDyRQ _model_server_result.datetime_utc '2024-10-18 23:32:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mxg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 6MXG # _exptl.entry_id 6MXG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.97 _cell.angle_gamma 90 _cell.entry_id 6MXG _cell.length_a 117.57 _cell.length_b 94.37 _cell.length_c 45 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MXG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 40 A ASP 34 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? metalc ? metalc2 A OD2 ASP 40 A ASP 34 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc3 D MG MG . A MG 302 1_555 K O HOH . A HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc4 D MG MG . A MG 302 1_555 K O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc5 E MG MG . A MG 303 1_555 K O HOH . A HOH 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc6 E MG MG . A MG 303 1_555 K O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc7 B OE2 GLU 119 B GLU 113 1_555 I MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc8 B OD1 ASP 120 B ASP 114 1_555 I MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc9 B OD2 ASP 120 B ASP 114 1_555 I MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc10 B OD1 ASP 179 B ASP 173 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc11 B OD2 ASP 179 B ASP 173 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc12 G O2' XMP . B XMP 301 1_555 H MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc13 H MG MG . B MG 302 1_555 L O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6MXG _atom_sites.fract_transf_matrix[1][1] 0.008506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003431 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XMP A 1 301 301 XMP XMP . D 3 MG A 1 302 4 MG MG . E 3 MG A 1 303 5 MG MG . F 4 SO4 A 1 304 1 SO4 SO4 . G 2 XMP B 1 301 300 XMP XMP . H 3 MG B 1 302 1 MG MG . I 3 MG B 1 303 3 MG MG . J 4 SO4 B 1 304 2 SO4 SO4 . K 5 HOH A 1 401 28 HOH HOH . K 5 HOH A 2 402 47 HOH HOH . K 5 HOH A 3 403 88 HOH HOH . K 5 HOH A 4 404 35 HOH HOH . K 5 HOH A 5 405 75 HOH HOH . K 5 HOH A 6 406 40 HOH HOH . K 5 HOH A 7 407 14 HOH HOH . K 5 HOH A 8 408 5 HOH HOH . K 5 HOH A 9 409 84 HOH HOH . K 5 HOH A 10 410 85 HOH HOH . K 5 HOH A 11 411 80 HOH HOH . K 5 HOH A 12 412 38 HOH HOH . K 5 HOH A 13 413 69 HOH HOH . K 5 HOH A 14 414 20 HOH HOH . K 5 HOH A 15 415 64 HOH HOH . K 5 HOH A 16 416 16 HOH HOH . K 5 HOH A 17 417 33 HOH HOH . K 5 HOH A 18 418 61 HOH HOH . K 5 HOH A 19 419 59 HOH HOH . K 5 HOH A 20 420 48 HOH HOH . K 5 HOH A 21 421 73 HOH HOH . K 5 HOH A 22 422 44 HOH HOH . K 5 HOH A 23 423 65 HOH HOH . K 5 HOH A 24 424 66 HOH HOH . K 5 HOH A 25 425 74 HOH HOH . K 5 HOH A 26 426 50 HOH HOH . K 5 HOH A 27 427 70 HOH HOH . K 5 HOH A 28 428 42 HOH HOH . L 5 HOH B 1 401 18 HOH HOH . L 5 HOH B 2 402 27 HOH HOH . L 5 HOH B 3 403 4 HOH HOH . L 5 HOH B 4 404 43 HOH HOH . L 5 HOH B 5 405 10 HOH HOH . L 5 HOH B 6 406 22 HOH HOH . L 5 HOH B 7 407 31 HOH HOH . L 5 HOH B 8 408 87 HOH HOH . L 5 HOH B 9 409 19 HOH HOH . L 5 HOH B 10 410 24 HOH HOH . L 5 HOH B 11 411 23 HOH HOH . L 5 HOH B 12 412 32 HOH HOH . L 5 HOH B 13 413 7 HOH HOH . L 5 HOH B 14 414 3 HOH HOH . L 5 HOH B 15 415 2 HOH HOH . L 5 HOH B 16 416 13 HOH HOH . L 5 HOH B 17 417 63 HOH HOH . L 5 HOH B 18 418 9 HOH HOH . L 5 HOH B 19 419 26 HOH HOH . L 5 HOH B 20 420 39 HOH HOH . L 5 HOH B 21 421 54 HOH HOH . L 5 HOH B 22 422 58 HOH HOH . L 5 HOH B 23 423 21 HOH HOH . L 5 HOH B 24 424 25 HOH HOH . L 5 HOH B 25 425 8 HOH HOH . L 5 HOH B 26 426 55 HOH HOH . L 5 HOH B 27 427 67 HOH HOH . L 5 HOH B 28 428 11 HOH HOH . L 5 HOH B 29 429 30 HOH HOH . L 5 HOH B 30 430 86 HOH HOH . L 5 HOH B 31 431 56 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 235.21 _atom_site.Cartn_y -13.015 _atom_site.Cartn_z 92.952 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #