data_6MXO # _model_server_result.job_id kXQwkM4tPMUlj2zkjZyuWA _model_server_result.datetime_utc '2024-10-19 16:31:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6mxo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":503}' # _entry.id 6MXO # _exptl.entry_id 6MXO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6MXO _cell.length_a 98.56 _cell.length_b 98.56 _cell.length_c 81.713 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MXO _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 20 A ASP 13 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc2 A OD2 ASP 20 A ASP 13 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc3 A O MET 21 A MET 14 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc4 A OD2 ASP 122 A ASP 115 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc5 A OD1 ASP 122 A ASP 115 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc6 A OE2 GLU 123 A GLU 116 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc7 D O1G 0KX . A 0KX 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc8 D O1B 0KX . A 0KX 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc9 D O2A 0KX . A 0KX 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc10 D O2A 0KX . A 0KX 501 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc11 F MG MG . A MG 503 1_555 K O HOH . A HOH 674 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc12 F MG MG . A MG 503 1_555 C O3' DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc13 B N7 DG 3 T DG 3 1_555 J PT 9RD . T 9RD 101 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc14 B N7 DG 3 T DG 3 1_555 J PT 9RD . T 9RD 101 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc15 B N7 DG 4 T DG 4 1_555 J PT 9RD . T 9RD 101 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc16 B N7 DG 4 T DG 4 1_555 J PT 9RD . T 9RD 101 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.899 ? hydrog WATSON-CRICK hydrog1 B N3 DC 5 T DC 5 1_555 C N1 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N4 DC 5 T DC 5 1_555 C O6 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O2 DC 5 T DC 5 1_555 C N2 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N3 DT 6 T DT 6 1_555 C N1 DA 8 P DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O4 DT 6 T DT 6 1_555 C N6 DA 8 P DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N3 DC 7 T DC 7 1_555 C N1 DG 7 P DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N4 DC 7 T DC 7 1_555 C O6 DG 7 P DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O2 DC 7 T DC 7 1_555 C N2 DG 7 P DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N1 DA 8 T DA 8 1_555 C N3 DT 6 P DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N6 DA 8 T DA 8 1_555 C O4 DT 6 P DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N3 DC 9 T DC 9 1_555 C N1 DG 5 P DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N4 DC 9 T DC 9 1_555 C O6 DG 5 P DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B O2 DC 9 T DC 9 1_555 C N2 DG 5 P DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N1 DA 10 T DA 10 1_555 C N3 DT 4 P DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N6 DA 10 T DA 10 1_555 C O4 DT 4 P DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N3 DC 11 T DC 11 1_555 C N1 DG 3 P DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N4 DC 11 T DC 11 1_555 C O6 DG 3 P DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O2 DC 11 T DC 11 1_555 C N2 DG 3 P DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N3 DT 12 T DT 12 1_555 C N1 DA 2 P DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B O4 DT 12 T DT 12 1_555 C N6 DA 2 P DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6MXO _atom_sites.fract_transf_matrix[1][1] 0.010146 _atom_sites.fract_transf_matrix[1][2] 0.005858 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 0KX A 1 501 10 0KX 0KX . E 5 MG A 1 502 502 MG MG . F 5 MG A 1 503 503 MG MG . G 6 GOL A 1 504 504 GOL GOL . H 6 GOL A 1 505 505 GOL GOL . I 6 GOL A 1 506 506 GOL GOL . J 7 9RD T 1 101 101 9RD 1PT . K 8 HOH A 1 601 96 HOH HOH . K 8 HOH A 2 602 82 HOH HOH . K 8 HOH A 3 603 86 HOH HOH . K 8 HOH A 4 604 30 HOH HOH . K 8 HOH A 5 605 36 HOH HOH . K 8 HOH A 6 606 53 HOH HOH . K 8 HOH A 7 607 41 HOH HOH . K 8 HOH A 8 608 39 HOH HOH . K 8 HOH A 9 609 6 HOH HOH . K 8 HOH A 10 610 42 HOH HOH . K 8 HOH A 11 611 91 HOH HOH . K 8 HOH A 12 612 51 HOH HOH . K 8 HOH A 13 613 95 HOH HOH . K 8 HOH A 14 614 14 HOH HOH . K 8 HOH A 15 615 28 HOH HOH . K 8 HOH A 16 616 21 HOH HOH . K 8 HOH A 17 617 40 HOH HOH . K 8 HOH A 18 618 22 HOH HOH . K 8 HOH A 19 619 43 HOH HOH . K 8 HOH A 20 620 31 HOH HOH . K 8 HOH A 21 621 44 HOH HOH . K 8 HOH A 22 622 52 HOH HOH . K 8 HOH A 23 623 37 HOH HOH . K 8 HOH A 24 624 49 HOH HOH . K 8 HOH A 25 625 80 HOH HOH . K 8 HOH A 26 626 74 HOH HOH . K 8 HOH A 27 627 57 HOH HOH . K 8 HOH A 28 628 33 HOH HOH . K 8 HOH A 29 629 50 HOH HOH . K 8 HOH A 30 630 12 HOH HOH . K 8 HOH A 31 631 89 HOH HOH . K 8 HOH A 32 632 65 HOH HOH . K 8 HOH A 33 633 3 HOH HOH . K 8 HOH A 34 634 15 HOH HOH . K 8 HOH A 35 635 64 HOH HOH . K 8 HOH A 36 636 83 HOH HOH . K 8 HOH A 37 637 35 HOH HOH . K 8 HOH A 38 638 5 HOH HOH . K 8 HOH A 39 639 93 HOH HOH . K 8 HOH A 40 640 23 HOH HOH . K 8 HOH A 41 641 79 HOH HOH . K 8 HOH A 42 642 94 HOH HOH . K 8 HOH A 43 643 45 HOH HOH . K 8 HOH A 44 644 47 HOH HOH . K 8 HOH A 45 645 70 HOH HOH . K 8 HOH A 46 646 75 HOH HOH . K 8 HOH A 47 647 27 HOH HOH . K 8 HOH A 48 648 54 HOH HOH . K 8 HOH A 49 649 61 HOH HOH . K 8 HOH A 50 650 55 HOH HOH . K 8 HOH A 51 651 1 HOH HOH . K 8 HOH A 52 652 17 HOH HOH . K 8 HOH A 53 653 20 HOH HOH . K 8 HOH A 54 654 16 HOH HOH . K 8 HOH A 55 655 2 HOH HOH . K 8 HOH A 56 656 13 HOH HOH . K 8 HOH A 57 657 67 HOH HOH . K 8 HOH A 58 658 34 HOH HOH . K 8 HOH A 59 659 48 HOH HOH . K 8 HOH A 60 660 71 HOH HOH . K 8 HOH A 61 661 10 HOH HOH . K 8 HOH A 62 662 18 HOH HOH . K 8 HOH A 63 663 19 HOH HOH . K 8 HOH A 64 664 46 HOH HOH . K 8 HOH A 65 665 25 HOH HOH . K 8 HOH A 66 666 92 HOH HOH . K 8 HOH A 67 667 32 HOH HOH . K 8 HOH A 68 668 29 HOH HOH . K 8 HOH A 69 669 68 HOH HOH . K 8 HOH A 70 670 72 HOH HOH . K 8 HOH A 71 671 87 HOH HOH . K 8 HOH A 72 672 60 HOH HOH . K 8 HOH A 73 673 84 HOH HOH . K 8 HOH A 74 674 58 HOH HOH . K 8 HOH A 75 675 7 HOH HOH . K 8 HOH A 76 676 8 HOH HOH . K 8 HOH A 77 677 76 HOH HOH . K 8 HOH A 78 678 73 HOH HOH . K 8 HOH A 79 679 81 HOH HOH . K 8 HOH A 80 680 63 HOH HOH . K 8 HOH A 81 681 69 HOH HOH . K 8 HOH A 82 682 26 HOH HOH . K 8 HOH A 83 683 9 HOH HOH . K 8 HOH A 84 684 11 HOH HOH . K 8 HOH A 85 685 4 HOH HOH . K 8 HOH A 86 686 24 HOH HOH . K 8 HOH A 87 687 38 HOH HOH . K 8 HOH A 88 688 78 HOH HOH . K 8 HOH A 89 689 62 HOH HOH . K 8 HOH A 90 690 56 HOH HOH . K 8 HOH A 91 691 90 HOH HOH . K 8 HOH A 92 692 85 HOH HOH . K 8 HOH A 93 693 66 HOH HOH . K 8 HOH A 94 694 59 HOH HOH . K 8 HOH A 95 695 77 HOH HOH . K 8 HOH A 96 696 97 HOH HOH . L 8 HOH T 1 201 202 HOH HOH . L 8 HOH T 2 202 98 HOH HOH . L 8 HOH T 3 203 207 HOH HOH . L 8 HOH T 4 204 203 HOH HOH . L 8 HOH T 5 205 204 HOH HOH . L 8 HOH T 6 206 211 HOH HOH . L 8 HOH T 7 207 201 HOH HOH . L 8 HOH T 8 208 209 HOH HOH . L 8 HOH T 9 209 205 HOH HOH . L 8 HOH T 10 210 213 HOH HOH . L 8 HOH T 11 211 212 HOH HOH . L 8 HOH T 12 212 210 HOH HOH . L 8 HOH T 13 213 206 HOH HOH . L 8 HOH T 14 214 208 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x -45.59 _atom_site.Cartn_y -0.424 _atom_site.Cartn_z -2.219 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #