data_6N1G # _model_server_result.job_id o4XgBct0qicW91G9T-bvdg _model_server_result.datetime_utc '2024-12-26 15:30:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n1g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":402}' # _entry.id 6N1G # _exptl.entry_id 6N1G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N1G _cell.length_a 385.658 _cell.length_b 385.658 _cell.length_c 385.658 _cell.Z_PDB 384 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N1G _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 41 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I 1 1,2 C,D,J,K,L,M,N,O,P 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 26_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6N1G _atom_sites.fract_transf_matrix[1][1] 0.002593 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 401 2 GOL GOL . F 2 GOL A 1 402 661 GOL GOL . G 2 GOL C 1 401 2 GOL GOL . H 2 GOL C 1 402 661 GOL GOL . I 2 GOL C 1 403 663 GOL GOL . J 2 GOL B 1 401 2 GOL GOL . K 2 GOL B 1 402 661 GOL GOL . L 2 GOL B 1 403 663 GOL GOL . M 2 GOL D 1 401 2 GOL GOL . N 2 GOL D 1 402 661 GOL GOL . O 2 GOL D 1 403 663 GOL GOL . P 2 GOL D 1 404 1 GOL GOL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 2 -15.874 -2.73 -84.538 0.61 91.69 ? C1 GOL 402 C 1 HETATM 2 O O1 GOL . . . H 2 -15.828 -3.463 -83.345 0.61 92.48 ? O1 GOL 402 C 1 HETATM 3 C C2 GOL . . . H 2 -16.301 -3.711 -85.659 0.61 88.59 ? C2 GOL 402 C 1 HETATM 4 O O2 GOL . . . H 2 -15.211 -4.284 -86.299 0.61 87.43 ? O2 GOL 402 C 1 HETATM 5 C C3 GOL . . . H 2 -17.151 -2.866 -86.626 0.61 86.11 ? C3 GOL 402 C 1 HETATM 6 O O3 GOL . . . H 2 -17.33 -3.639 -87.773 0.61 82.43 ? O3 GOL 402 C 1 HETATM 7 H H11 GOL . . . H 2 -15.018 -2.335 -84.766 0.61 110.11 ? H11 GOL 402 C 1 HETATM 8 H H12 GOL . . . H 2 -16.505 -1.994 -84.499 0.61 110.11 ? H12 GOL 402 C 1 HETATM 9 H HO1 GOL . . . H 2 -15.526 -2.938 -82.75 0.61 111.06 ? HO1 GOL 402 C 1 HETATM 10 H H2 GOL . . . H 2 -16.814 -4.445 -85.286 0.61 106.39 ? H2 GOL 402 C 1 HETATM 11 H HO2 GOL . . . H 2 -15.346 -4.237 -87.137 0.61 105 ? HO2 GOL 402 C 1 HETATM 12 H H31 GOL . . . H 2 -16.697 -2.025 -86.794 0.61 103.41 ? H31 GOL 402 C 1 HETATM 13 H H32 GOL . . . H 2 -17.983 -2.625 -86.189 0.61 103.41 ? H32 GOL 402 C 1 HETATM 14 H HO3 GOL . . . H 2 -17.381 -3.098 -88.427 0.61 99 ? HO3 GOL 402 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 68 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #