data_6N1S # _model_server_result.job_id cxB16Ah-EVLoy9oR5r4TNA _model_server_result.datetime_utc '2024-10-12 07:29:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 6N1S # _exptl.entry_id 6N1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.469 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N1S _cell.length_a 53.689 _cell.length_b 145.522 _cell.length_c 175.922 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 J N N # _chem_comp.formula 'C24 H23 N5 O6' _chem_comp.formula_weight 477.469 _chem_comp.id CB3 _chem_comp.mon_nstd_flag . _chem_comp.name '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 CB3 sing 70 n y N1 C8A CB3 sing 71 n y N1 HN1 CB3 sing 72 n n C2 NA2 CB3 sing 73 n n C2 N3 CB3 doub 74 n y NA2 HN21 CB3 sing 75 n n NA2 HN22 CB3 sing 76 n n N3 C4 CB3 sing 77 n y C4 O4 CB3 doub 78 n n C4 C4A CB3 sing 79 n y C4A C5 CB3 doub 80 n y C4A C8A CB3 sing 81 n y C5 C6 CB3 sing 82 n y C5 H5 CB3 sing 83 n n C6 C7 CB3 doub 84 n y C6 C9 CB3 sing 85 n n C7 C8 CB3 sing 86 n y C7 H7 CB3 sing 87 n n C8 C8A CB3 doub 88 n y C8 H8 CB3 sing 89 n n C9 N10 CB3 sing 90 n n C9 H91 CB3 sing 91 n n C9 H92 CB3 sing 92 n n N10 C14 CB3 sing 93 n n N10 CP1 CB3 sing 94 n n C11 C12 CB3 doub 95 n y C11 C16 CB3 sing 96 n y C11 C CB3 sing 97 n n C12 C13 CB3 sing 98 n y C12 H12 CB3 sing 99 n n C13 C14 CB3 doub 100 n y C13 H13 CB3 sing 101 n n C14 C15 CB3 sing 102 n y C15 C16 CB3 doub 103 n y C15 H15 CB3 sing 104 n n C16 H16 CB3 sing 105 n n C O CB3 doub 106 n n C N CB3 sing 107 n n N CA CB3 sing 108 n n N HN CB3 sing 109 n n CA CB CB3 sing 110 n n CA CT CB3 sing 111 n n CA HA CB3 sing 112 n n CB CG CB3 sing 113 n n CB HB1 CB3 sing 114 n n CB HB2 CB3 sing 115 n n CG CD CB3 sing 116 n n CG HG1 CB3 sing 117 n n CG HG2 CB3 sing 118 n n CD OE1 CB3 doub 119 n n CD OE2 CB3 sing 120 n n OE2 HOE2 CB3 sing 121 n n CT O1 CB3 doub 122 n n CT O2 CB3 sing 123 n n O2 HO2 CB3 sing 124 n n CP1 CP2 CB3 sing 125 n n CP1 HP11 CB3 sing 126 n n CP1 HP12 CB3 sing 127 n n CP2 CP3 CB3 trip 128 n n CP3 HP3 CB3 sing 129 n n # _atom_sites.entry_id 6N1S _atom_sites.fract_transf_matrix[1][1] 0.018626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 702 NDP NDP . E 4 CB3 A 1 703 703 CB3 CB3 . F 5 K9A A 1 704 1 K9A K9A . G 6 EDO A 1 705 1 EDO EDO . H 2 UMP B 1 701 701 UMP UMP . I 3 NDP B 1 702 702 NDP NDP . J 4 CB3 B 1 703 703 CB3 CB3 . K 5 K9A B 1 704 2 K9A K9A . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CB3 . . . E 4 17.232 83.332 -31.684 0.5 21.28 ? N1 CB3 703 A 1 HETATM 2 C C2 CB3 . . . E 4 16.505 83.077 -32.814 0.5 21.26 ? C2 CB3 703 A 1 HETATM 3 N NA2 CB3 . . . E 4 15.292 82.543 -32.669 0.5 21.24 ? NA2 CB3 703 A 1 HETATM 4 N N3 CB3 . . . E 4 16.968 83.338 -34.034 0.5 21.26 ? N3 CB3 703 A 1 HETATM 5 C C4 CB3 . . . E 4 18.207 83.885 -34.181 0.5 21.28 ? C4 CB3 703 A 1 HETATM 6 O O4 CB3 . . . E 4 18.596 84.115 -35.335 0.5 21.19 ? O4 CB3 703 A 1 HETATM 7 C C4A CB3 . . . E 4 19.037 84.186 -33.007 0.5 21.35 ? C4A CB3 703 A 1 HETATM 8 C C5 CB3 . . . E 4 20.318 84.747 -33.087 0.5 21.33 ? C5 CB3 703 A 1 HETATM 9 C C6 CB3 . . . E 4 21.047 85.007 -31.964 0.5 21.49 ? C6 CB3 703 A 1 HETATM 10 C C7 CB3 . . . E 4 20.489 84.698 -30.699 0.5 21.48 ? C7 CB3 703 A 1 HETATM 11 C C8 CB3 . . . E 4 19.239 84.147 -30.592 0.5 21.45 ? C8 CB3 703 A 1 HETATM 12 C C8A CB3 . . . E 4 18.498 83.886 -31.747 0.5 21.35 ? C8A CB3 703 A 1 HETATM 13 C C9 CB3 . . . E 4 22.425 85.618 -32.052 0.5 21.78 ? C9 CB3 703 A 1 HETATM 14 N N10 CB3 . . . E 4 22.7 86.268 -33.328 0.5 22 ? N10 CB3 703 A 1 HETATM 15 C C11 CB3 . . . E 4 20.331 89.396 -34.76 0.5 23.88 ? C11 CB3 703 A 1 HETATM 16 C C12 CB3 . . . E 4 21.399 88.917 -35.51 0.5 23.16 ? C12 CB3 703 A 1 HETATM 17 C C13 CB3 . . . E 4 22.182 87.885 -35.043 0.5 22.69 ? C13 CB3 703 A 1 HETATM 18 C C14 CB3 . . . E 4 21.921 87.29 -33.795 0.5 22.53 ? C14 CB3 703 A 1 HETATM 19 C C15 CB3 . . . E 4 20.835 87.786 -33.046 0.5 22.96 ? C15 CB3 703 A 1 HETATM 20 C C16 CB3 . . . E 4 20.061 88.824 -33.522 0.5 23.32 ? C16 CB3 703 A 1 HETATM 21 C C CB3 . . . E 4 19.53 90.535 -35.321 0.5 25.06 ? C CB3 703 A 1 HETATM 22 O O CB3 . . . E 4 18.933 91.321 -34.588 0.5 25.1 ? O CB3 703 A 1 HETATM 23 N N CB3 . . . E 4 19.607 90.703 -36.643 0.5 26.44 ? N CB3 703 A 1 HETATM 24 C CA CB3 . . . E 4 19.846 92.005 -37.248 0.5 27.24 ? CA CB3 703 A 1 HETATM 25 C CB CB3 . . . E 4 19.91 91.874 -38.773 0.5 27.85 ? CB CB3 703 A 1 HETATM 26 C CG CB3 . . . E 4 20.772 90.705 -39.222 0.5 28.09 ? CG CB3 703 A 1 HETATM 27 C CD CB3 . . . E 4 20.357 90.081 -40.542 0.5 28.4 ? CD CB3 703 A 1 HETATM 28 O OE1 CB3 . . . E 4 20.209 88.844 -40.589 0.5 28.49 ? OE1 CB3 703 A 1 HETATM 29 O OE2 CB3 . . . E 4 20.181 90.834 -41.519 0.5 28.52 ? OE2 CB3 703 A 1 HETATM 30 C CT CB3 . . . E 4 18.78 93.012 -36.784 0.5 27.28 ? CT CB3 703 A 1 HETATM 31 O O1 CB3 . . . E 4 17.701 92.544 -36.369 0.5 27.23 ? O1 CB3 703 A 1 HETATM 32 O O2 CB3 . . . E 4 19.073 94.223 -36.848 0.5 27.39 ? O2 CB3 703 A 1 HETATM 33 C CP1 CB3 . . . E 4 23.841 85.783 -34.093 0.5 21.82 ? CP1 CB3 703 A 1 HETATM 34 C CP2 CB3 . . . E 4 23.411 85.033 -35.277 0.5 21.66 ? CP2 CB3 703 A 1 HETATM 35 C CP3 CB3 . . . E 4 23.034 84.402 -36.197 0.5 21.52 ? CP3 CB3 703 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #