data_6N36 # _model_server_result.job_id GQimazqGKfimpbHTCJmxeg _model_server_result.datetime_utc '2024-11-09 23:18:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 6N36 # _exptl.entry_id 6N36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N36 _cell.length_a 40.137 _cell.length_b 79.849 _cell.length_c 85.488 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 83 A HIS 106 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc2 A ND1 HIS 85 A HIS 108 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc3 A OD2 ASP 87 A ASP 110 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc4 A NE2 HIS 88 A HIS 111 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc5 A NE2 HIS 160 A HIS 183 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc6 A NE2 HIS 226 A HIS 249 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc7 B ZN ZN . A ZN 501 1_555 E O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc8 B ZN ZN . A ZN 501 1_555 E O HOH . A HOH 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc9 C ZN ZN . A ZN 502 1_555 E O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc10 C ZN ZN . A ZN 502 1_555 E O HOH . A HOH 772 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc11 C ZN ZN . A ZN 502 1_555 E O HOH . A HOH 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6N36 _atom_sites.fract_transf_matrix[1][1] 0.024915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 501 ZN ZN . C 2 ZN A 1 502 502 ZN ZN . D 3 EDO A 1 503 503 EDO EDO . E 4 HOH A 1 601 90 HOH HOH . E 4 HOH A 2 602 197 HOH HOH . E 4 HOH A 3 603 202 HOH HOH . E 4 HOH A 4 604 150 HOH HOH . E 4 HOH A 5 605 115 HOH HOH . E 4 HOH A 6 606 86 HOH HOH . E 4 HOH A 7 607 181 HOH HOH . E 4 HOH A 8 608 138 HOH HOH . E 4 HOH A 9 609 174 HOH HOH . E 4 HOH A 10 610 217 HOH HOH . E 4 HOH A 11 611 176 HOH HOH . E 4 HOH A 12 612 32 HOH HOH . E 4 HOH A 13 613 182 HOH HOH . E 4 HOH A 14 614 224 HOH HOH . E 4 HOH A 15 615 127 HOH HOH . E 4 HOH A 16 616 89 HOH HOH . E 4 HOH A 17 617 121 HOH HOH . E 4 HOH A 18 618 168 HOH HOH . E 4 HOH A 19 619 30 HOH HOH . E 4 HOH A 20 620 173 HOH HOH . E 4 HOH A 21 621 94 HOH HOH . E 4 HOH A 22 622 225 HOH HOH . E 4 HOH A 23 623 163 HOH HOH . E 4 HOH A 24 624 184 HOH HOH . E 4 HOH A 25 625 67 HOH HOH . E 4 HOH A 26 626 154 HOH HOH . E 4 HOH A 27 627 192 HOH HOH . E 4 HOH A 28 628 209 HOH HOH . E 4 HOH A 29 629 100 HOH HOH . E 4 HOH A 30 630 179 HOH HOH . E 4 HOH A 31 631 46 HOH HOH . E 4 HOH A 32 632 68 HOH HOH . E 4 HOH A 33 633 159 HOH HOH . E 4 HOH A 34 634 36 HOH HOH . E 4 HOH A 35 635 13 HOH HOH . E 4 HOH A 36 636 5 HOH HOH . E 4 HOH A 37 637 191 HOH HOH . E 4 HOH A 38 638 102 HOH HOH . E 4 HOH A 39 639 28 HOH HOH . E 4 HOH A 40 640 98 HOH HOH . E 4 HOH A 41 641 166 HOH HOH . E 4 HOH A 42 642 97 HOH HOH . E 4 HOH A 43 643 59 HOH HOH . E 4 HOH A 44 644 212 HOH HOH . E 4 HOH A 45 645 63 HOH HOH . E 4 HOH A 46 646 52 HOH HOH . E 4 HOH A 47 647 203 HOH HOH . E 4 HOH A 48 648 189 HOH HOH . E 4 HOH A 49 649 41 HOH HOH . E 4 HOH A 50 650 31 HOH HOH . E 4 HOH A 51 651 157 HOH HOH . E 4 HOH A 52 652 144 HOH HOH . E 4 HOH A 53 653 175 HOH HOH . E 4 HOH A 54 654 21 HOH HOH . E 4 HOH A 55 655 223 HOH HOH . E 4 HOH A 56 656 194 HOH HOH . E 4 HOH A 57 657 65 HOH HOH . E 4 HOH A 58 658 149 HOH HOH . E 4 HOH A 59 659 14 HOH HOH . E 4 HOH A 60 660 169 HOH HOH . E 4 HOH A 61 661 177 HOH HOH . E 4 HOH A 62 662 114 HOH HOH . E 4 HOH A 63 663 172 HOH HOH . E 4 HOH A 64 664 221 HOH HOH . E 4 HOH A 65 665 117 HOH HOH . E 4 HOH A 66 666 122 HOH HOH . E 4 HOH A 67 667 78 HOH HOH . E 4 HOH A 68 668 25 HOH HOH . E 4 HOH A 69 669 17 HOH HOH . E 4 HOH A 70 670 104 HOH HOH . E 4 HOH A 71 671 85 HOH HOH . E 4 HOH A 72 672 56 HOH HOH . E 4 HOH A 73 673 193 HOH HOH . E 4 HOH A 74 674 84 HOH HOH . E 4 HOH A 75 675 10 HOH HOH . E 4 HOH A 76 676 124 HOH HOH . E 4 HOH A 77 677 222 HOH HOH . E 4 HOH A 78 678 16 HOH HOH . E 4 HOH A 79 679 106 HOH HOH . E 4 HOH A 80 680 2 HOH HOH . E 4 HOH A 81 681 6 HOH HOH . E 4 HOH A 82 682 142 HOH HOH . E 4 HOH A 83 683 69 HOH HOH . E 4 HOH A 84 684 39 HOH HOH . E 4 HOH A 85 685 162 HOH HOH . E 4 HOH A 86 686 4 HOH HOH . E 4 HOH A 87 687 190 HOH HOH . E 4 HOH A 88 688 126 HOH HOH . E 4 HOH A 89 689 116 HOH HOH . E 4 HOH A 90 690 11 HOH HOH . E 4 HOH A 91 691 74 HOH HOH . E 4 HOH A 92 692 199 HOH HOH . E 4 HOH A 93 693 185 HOH HOH . E 4 HOH A 94 694 54 HOH HOH . E 4 HOH A 95 695 204 HOH HOH . E 4 HOH A 96 696 7 HOH HOH . E 4 HOH A 97 697 195 HOH HOH . E 4 HOH A 98 698 8 HOH HOH . E 4 HOH A 99 699 211 HOH HOH . E 4 HOH A 100 700 110 HOH HOH . E 4 HOH A 101 701 40 HOH HOH . E 4 HOH A 102 702 49 HOH HOH . E 4 HOH A 103 703 29 HOH HOH . E 4 HOH A 104 704 143 HOH HOH . E 4 HOH A 105 705 72 HOH HOH . E 4 HOH A 106 706 128 HOH HOH . E 4 HOH A 107 707 55 HOH HOH . E 4 HOH A 108 708 24 HOH HOH . E 4 HOH A 109 709 38 HOH HOH . E 4 HOH A 110 710 183 HOH HOH . E 4 HOH A 111 711 64 HOH HOH . E 4 HOH A 112 712 27 HOH HOH . E 4 HOH A 113 713 35 HOH HOH . E 4 HOH A 114 714 48 HOH HOH . E 4 HOH A 115 715 153 HOH HOH . E 4 HOH A 116 716 23 HOH HOH . E 4 HOH A 117 717 151 HOH HOH . E 4 HOH A 118 718 135 HOH HOH . E 4 HOH A 119 719 171 HOH HOH . E 4 HOH A 120 720 22 HOH HOH . E 4 HOH A 121 721 3 HOH HOH . E 4 HOH A 122 722 26 HOH HOH . E 4 HOH A 123 723 131 HOH HOH . E 4 HOH A 124 724 178 HOH HOH . E 4 HOH A 125 725 113 HOH HOH . E 4 HOH A 126 726 1 HOH HOH . E 4 HOH A 127 727 93 HOH HOH . E 4 HOH A 128 728 61 HOH HOH . E 4 HOH A 129 729 79 HOH HOH . E 4 HOH A 130 730 76 HOH HOH . E 4 HOH A 131 731 101 HOH HOH . E 4 HOH A 132 732 226 HOH HOH . E 4 HOH A 133 733 109 HOH HOH . E 4 HOH A 134 734 180 HOH HOH . E 4 HOH A 135 735 44 HOH HOH . E 4 HOH A 136 736 42 HOH HOH . E 4 HOH A 137 737 43 HOH HOH . E 4 HOH A 138 738 62 HOH HOH . E 4 HOH A 139 739 33 HOH HOH . E 4 HOH A 140 740 51 HOH HOH . E 4 HOH A 141 741 34 HOH HOH . E 4 HOH A 142 742 152 HOH HOH . E 4 HOH A 143 743 132 HOH HOH . E 4 HOH A 144 744 9 HOH HOH . E 4 HOH A 145 745 95 HOH HOH . E 4 HOH A 146 746 37 HOH HOH . E 4 HOH A 147 747 130 HOH HOH . E 4 HOH A 148 748 134 HOH HOH . E 4 HOH A 149 749 208 HOH HOH . E 4 HOH A 150 750 220 HOH HOH . E 4 HOH A 151 751 19 HOH HOH . E 4 HOH A 152 752 105 HOH HOH . E 4 HOH A 153 753 53 HOH HOH . E 4 HOH A 154 754 148 HOH HOH . E 4 HOH A 155 755 133 HOH HOH . E 4 HOH A 156 756 15 HOH HOH . E 4 HOH A 157 757 73 HOH HOH . E 4 HOH A 158 758 108 HOH HOH . E 4 HOH A 159 759 186 HOH HOH . E 4 HOH A 160 760 164 HOH HOH . E 4 HOH A 161 761 75 HOH HOH . E 4 HOH A 162 762 161 HOH HOH . E 4 HOH A 163 763 50 HOH HOH . E 4 HOH A 164 764 12 HOH HOH . E 4 HOH A 165 765 139 HOH HOH . E 4 HOH A 166 766 111 HOH HOH . E 4 HOH A 167 767 167 HOH HOH . E 4 HOH A 168 768 57 HOH HOH . E 4 HOH A 169 769 140 HOH HOH . E 4 HOH A 170 770 146 HOH HOH . E 4 HOH A 171 771 158 HOH HOH . E 4 HOH A 172 772 83 HOH HOH . E 4 HOH A 173 773 187 HOH HOH . E 4 HOH A 174 774 71 HOH HOH . E 4 HOH A 175 775 20 HOH HOH . E 4 HOH A 176 776 45 HOH HOH . E 4 HOH A 177 777 70 HOH HOH . E 4 HOH A 178 778 112 HOH HOH . E 4 HOH A 179 779 77 HOH HOH . E 4 HOH A 180 780 170 HOH HOH . E 4 HOH A 181 781 18 HOH HOH . E 4 HOH A 182 782 58 HOH HOH . E 4 HOH A 183 783 201 HOH HOH . E 4 HOH A 184 784 47 HOH HOH . E 4 HOH A 185 785 188 HOH HOH . E 4 HOH A 186 786 210 HOH HOH . E 4 HOH A 187 787 215 HOH HOH . E 4 HOH A 188 788 160 HOH HOH . E 4 HOH A 189 789 87 HOH HOH . E 4 HOH A 190 790 155 HOH HOH . E 4 HOH A 191 791 205 HOH HOH . E 4 HOH A 192 792 136 HOH HOH . E 4 HOH A 193 793 216 HOH HOH . E 4 HOH A 194 794 99 HOH HOH . E 4 HOH A 195 795 60 HOH HOH . E 4 HOH A 196 796 129 HOH HOH . E 4 HOH A 197 797 107 HOH HOH . E 4 HOH A 198 798 207 HOH HOH . E 4 HOH A 199 799 119 HOH HOH . E 4 HOH A 200 800 200 HOH HOH . E 4 HOH A 201 801 218 HOH HOH . E 4 HOH A 202 802 103 HOH HOH . E 4 HOH A 203 803 123 HOH HOH . E 4 HOH A 204 804 206 HOH HOH . E 4 HOH A 205 805 92 HOH HOH . E 4 HOH A 206 806 137 HOH HOH . E 4 HOH A 207 807 66 HOH HOH . E 4 HOH A 208 808 96 HOH HOH . E 4 HOH A 209 809 198 HOH HOH . E 4 HOH A 210 810 145 HOH HOH . E 4 HOH A 211 811 80 HOH HOH . E 4 HOH A 212 812 118 HOH HOH . E 4 HOH A 213 813 141 HOH HOH . E 4 HOH A 214 814 196 HOH HOH . E 4 HOH A 215 815 82 HOH HOH . E 4 HOH A 216 816 213 HOH HOH . E 4 HOH A 217 817 88 HOH HOH . E 4 HOH A 218 818 125 HOH HOH . E 4 HOH A 219 819 81 HOH HOH . E 4 HOH A 220 820 156 HOH HOH . E 4 HOH A 221 821 91 HOH HOH . E 4 HOH A 222 822 165 HOH HOH . E 4 HOH A 223 823 120 HOH HOH . E 4 HOH A 224 824 219 HOH HOH . E 4 HOH A 225 825 214 HOH HOH . E 4 HOH A 226 826 147 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -0.713 8.585 24.447 1 49.92 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . D 3 -1.77 8.197 25.305 1 51.99 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . D 3 -0.235 9.934 24.75 1 50.15 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . D 3 -0.965 10.913 24.029 1 54.1 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #