data_6N3G # _model_server_result.job_id wT74MBbWXyoGcIlHwWkFyA _model_server_result.datetime_utc '2024-11-23 21:25:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n3g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6N3G # _exptl.entry_id 6N3G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N3G _cell.length_a 151.84 _cell.length_b 151.84 _cell.length_c 53.74 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N3G _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 52 A CYS 52 1_555 K ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc2 A SG CYS 55 A CYS 55 1_555 K ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc3 A SG CYS 65 A CYS 65 1_555 L ZN ZN . A ZN 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc4 A SG CYS 68 A CYS 68 1_555 L ZN ZN . A ZN 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc5 A SG CYS 74 A CYS 74 1_555 K ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc6 A SG CYS 78 A CYS 78 1_555 K ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc7 A NE2 HIS 86 A HIS 86 1_555 L ZN ZN . A ZN 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc8 A SG CYS 90 A CYS 90 1_555 L ZN ZN . A ZN 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc9 A SG CYS 209 A CYS 209 1_555 M ZN ZN . A ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc10 A SG CYS 262 A CYS 262 1_555 M ZN ZN . A ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc11 A SG CYS 264 A CYS 264 1_555 M ZN ZN . A ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc12 A SG CYS 267 A CYS 267 1_555 M ZN ZN . A ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 6N3G _atom_sites.fract_transf_matrix[1][1] 0.006586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006586 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018608 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH A 1 501 504 SAH SAH . C 3 12P A 1 502 505 12P PE8 . D 4 NI A 1 503 1 NI NI . E 4 NI A 1 504 2 NI NI . F 5 EOH A 1 505 1 EOH EOH . G 5 EOH A 1 506 2 EOH EOH . H 5 EOH A 1 507 3 EOH EOH . I 5 EOH A 1 508 4 EOH EOH . J 5 EOH A 1 509 5 EOH EOH . K 6 ZN A 1 510 507 ZN ZN . L 6 ZN A 1 511 508 ZN ZN . M 6 ZN A 1 512 509 ZN ZN . N 7 HOH A 1 601 3 HOH HOH . N 7 HOH A 2 602 21 HOH HOH . N 7 HOH A 3 603 46 HOH HOH . N 7 HOH A 4 604 27 HOH HOH . N 7 HOH A 5 605 59 HOH HOH . N 7 HOH A 6 606 25 HOH HOH . N 7 HOH A 7 607 54 HOH HOH . N 7 HOH A 8 608 29 HOH HOH . N 7 HOH A 9 609 44 HOH HOH . N 7 HOH A 10 610 60 HOH HOH . N 7 HOH A 11 611 47 HOH HOH . N 7 HOH A 12 612 23 HOH HOH . N 7 HOH A 13 613 28 HOH HOH . N 7 HOH A 14 614 8 HOH HOH . N 7 HOH A 15 615 57 HOH HOH . N 7 HOH A 16 616 45 HOH HOH . N 7 HOH A 17 617 7 HOH HOH . N 7 HOH A 18 618 9 HOH HOH . N 7 HOH A 19 619 72 HOH HOH . N 7 HOH A 20 620 15 HOH HOH . N 7 HOH A 21 621 38 HOH HOH . N 7 HOH A 22 622 16 HOH HOH . N 7 HOH A 23 623 14 HOH HOH . N 7 HOH A 24 624 2 HOH HOH . N 7 HOH A 25 625 55 HOH HOH . N 7 HOH A 26 626 5 HOH HOH . N 7 HOH A 27 627 30 HOH HOH . N 7 HOH A 28 628 35 HOH HOH . N 7 HOH A 29 629 26 HOH HOH . N 7 HOH A 30 630 74 HOH HOH . N 7 HOH A 31 631 22 HOH HOH . N 7 HOH A 32 632 19 HOH HOH . N 7 HOH A 33 633 18 HOH HOH . N 7 HOH A 34 634 6 HOH HOH . N 7 HOH A 35 635 61 HOH HOH . N 7 HOH A 36 636 1 HOH HOH . N 7 HOH A 37 637 64 HOH HOH . N 7 HOH A 38 638 40 HOH HOH . N 7 HOH A 39 639 4 HOH HOH . N 7 HOH A 40 640 34 HOH HOH . N 7 HOH A 41 641 39 HOH HOH . N 7 HOH A 42 642 12 HOH HOH . N 7 HOH A 43 643 58 HOH HOH . N 7 HOH A 44 644 11 HOH HOH . N 7 HOH A 45 645 36 HOH HOH . N 7 HOH A 46 646 10 HOH HOH . N 7 HOH A 47 647 52 HOH HOH . N 7 HOH A 48 648 20 HOH HOH . N 7 HOH A 49 649 24 HOH HOH . N 7 HOH A 50 650 76 HOH HOH . N 7 HOH A 51 651 50 HOH HOH . N 7 HOH A 52 652 48 HOH HOH . N 7 HOH A 53 653 31 HOH HOH . N 7 HOH A 54 654 53 HOH HOH . N 7 HOH A 55 655 17 HOH HOH . N 7 HOH A 56 656 75 HOH HOH . N 7 HOH A 57 657 62 HOH HOH . N 7 HOH A 58 658 41 HOH HOH . N 7 HOH A 59 659 32 HOH HOH . N 7 HOH A 60 660 73 HOH HOH . N 7 HOH A 61 661 71 HOH HOH . N 7 HOH A 62 662 13 HOH HOH . N 7 HOH A 63 663 67 HOH HOH . N 7 HOH A 64 664 66 HOH HOH . N 7 HOH A 65 665 65 HOH HOH . N 7 HOH A 66 666 77 HOH HOH . N 7 HOH A 67 667 70 HOH HOH . N 7 HOH A 68 668 33 HOH HOH . N 7 HOH A 69 669 51 HOH HOH . N 7 HOH A 70 670 69 HOH HOH . N 7 HOH A 71 671 43 HOH HOH . N 7 HOH A 72 672 49 HOH HOH . N 7 HOH A 73 673 56 HOH HOH . N 7 HOH A 74 674 78 HOH HOH . N 7 HOH A 75 675 63 HOH HOH . N 7 HOH A 76 676 68 HOH HOH . N 7 HOH A 77 677 79 HOH HOH . N 7 HOH A 78 678 37 HOH HOH . N 7 HOH A 79 679 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O37 12P . . . C 3 178.567 31.645 -26.25 1 37.97 ? O37 12P 502 A 1 HETATM 2 C C36 12P . . . C 3 179.709 32.359 -26.642 1 38.53 ? C36 12P 502 A 1 HETATM 3 C C35 12P . . . C 3 180.507 32.755 -25.393 1 47.95 ? C35 12P 502 A 1 HETATM 4 O O34 12P . . . C 3 179.856 33.778 -24.679 1 54.91 ? O34 12P 502 A 1 HETATM 5 C C33 12P . . . C 3 179.12 33.374 -23.551 1 48.42 ? C33 12P 502 A 1 HETATM 6 C C32 12P . . . C 3 179.358 34.409 -22.453 1 46.23 ? C32 12P 502 A 1 HETATM 7 O O31 12P . . . C 3 178.983 35.692 -22.895 1 46.11 ? O31 12P 502 A 1 HETATM 8 C C30 12P . . . C 3 178.025 36.324 -22.076 1 47.62 ? C30 12P 502 A 1 HETATM 9 C C29 12P . . . C 3 177.243 37.412 -22.832 1 45.89 ? C29 12P 502 A 1 HETATM 10 O O28 12P . . . C 3 177.205 38.602 -22.079 1 43.74 ? O28 12P 502 A 1 HETATM 11 C C27 12P . . . C 3 176.482 39.663 -22.651 1 30.36 ? C27 12P 502 A 1 HETATM 12 C C26 12P . . . C 3 175.582 40.28 -21.572 1 28.78 ? C26 12P 502 A 1 HETATM 13 O O25 12P . . . C 3 176.292 41.259 -20.86 1 33.97 ? O25 12P 502 A 1 HETATM 14 C C24 12P . . . C 3 176.553 40.954 -19.51 1 44.34 ? C24 12P 502 A 1 HETATM 15 C C23 12P . . . C 3 176.676 42.239 -18.667 1 50.58 ? C23 12P 502 A 1 HETATM 16 O O22 12P . . . C 3 177.827 42.154 -17.86 1 52.95 ? O22 12P 502 A 1 HETATM 17 C C21 12P . . . C 3 178.249 43.336 -17.222 1 46.68 ? C21 12P 502 A 1 HETATM 18 C C20 12P . . . C 3 179.563 43.867 -17.828 1 37.26 ? C20 12P 502 A 1 HETATM 19 O O19 12P . . . C 3 179.711 45.221 -17.461 1 34.46 ? O19 12P 502 A 1 HETATM 20 C C18 12P . . . C 3 180.314 46.069 -18.415 1 40.42 ? C18 12P 502 A 1 HETATM 21 C C17 12P . . . C 3 179.618 47.439 -18.554 1 41.56 ? C17 12P 502 A 1 HETATM 22 O O16 12P . . . C 3 178.685 47.336 -19.611 1 60.21 ? O16 12P 502 A 1 HETATM 23 C C15 12P . . . C 3 178.292 48.529 -20.266 1 71.84 ? C15 12P 502 A 1 HETATM 24 C C14 12P . . . C 3 177.057 48.311 -21.172 1 74 ? C14 12P 502 A 1 HETATM 25 O O13 12P . . . C 3 177.182 49.005 -22.401 1 71.75 ? O13 12P 502 A 1 HETATM 26 C C12 12P . . . C 3 176.176 48.788 -23.371 1 59.36 ? C12 12P 502 A 1 HETATM 27 C C11 12P . . . C 3 176.705 49.23 -24.745 1 52.89 ? C11 12P 502 A 1 HETATM 28 O O10 12P . . . C 3 175.813 50.089 -25.418 1 47.96 ? O10 12P 502 A 1 HETATM 29 C C9 12P . . . C 3 175.431 49.658 -26.7 1 37.28 ? C9 12P 502 A 1 HETATM 30 C C8 12P . . . C 3 174.223 50.464 -27.185 1 36.36 ? C8 12P 502 A 1 HETATM 31 O O7 12P . . . C 3 173.03 49.879 -26.704 1 46.21 ? O7 12P 502 A 1 HETATM 32 C C6 12P . . . C 3 171.846 50.632 -26.85 1 48.66 ? C6 12P 502 A 1 HETATM 33 C C5 12P . . . C 3 172.095 52.098 -26.45 1 54.53 ? C5 12P 502 A 1 HETATM 34 O O4 12P . . . C 3 171.359 52.464 -25.302 1 58.55 ? O4 12P 502 A 1 HETATM 35 C C3 12P . . . C 3 172.094 53.036 -24.235 1 55.33 ? C3 12P 502 A 1 HETATM 36 C C2 12P . . . C 3 171.18 53.923 -23.367 1 49.48 ? C2 12P 502 A 1 HETATM 37 O O1 12P . . . C 3 171.496 53.817 -21.994 1 46.03 ? O1 12P 502 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 53 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 792 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 37 #