data_6N3V
#
_model_server_result.job_id            w6O5sdt-PB0yRe1fDMtHJA 
_model_server_result.datetime_utc      '2024-12-11 21:03:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6n3v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6N3V 
#
_exptl.entry_id    6N3V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              354.319 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "5'-O-(ethylcarbamoyl)guanosine" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.96 
_cell.angle_gamma         90 
_cell.entry_id            6N3V 
_cell.length_a            77.922 
_cell.length_b            46.306 
_cell.length_c            63.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6N3V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C13 H18 N6 O6' 
_chem_comp.formula_weight    354.319 
_chem_comp.id                KB7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "5'-O-(ethylcarbamoyl)guanosine" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O6 C6 KB7 doub 173 n n 
N1 C6 KB7 sing 174 n n 
N1 C2 KB7 sing 175 n n 
C6 C5 KB7 sing 176 n n 
N2 C2 KB7 sing 177 n n 
C2 N3 KB7 doub 178 n n 
C5 N7 KB7 sing 179 n y 
C5 C4 KB7 doub 180 n y 
N7 C8 KB7 doub 181 n y 
N3 C4 KB7 sing 182 n n 
C4 N9 KB7 sing 183 n y 
C8 N9 KB7 sing 184 n y 
N9 C1' KB7 sing 185 n n 
C1' C2' KB7 sing 186 n n 
C1' O4' KB7 sing 187 n n 
O2' C2' KB7 sing 188 n n 
C2' C3' KB7 sing 189 n n 
O4' C4' KB7 sing 190 n n 
C3' C4' KB7 sing 191 n n 
C3' O3' KB7 sing 192 n n 
C4' C5' KB7 sing 193 n n 
C5' O5' KB7 sing 194 n n 
O5' C1 KB7 sing 195 n n 
O2 C1 KB7 doub 196 n n 
C1 N4 KB7 sing 197 n n 
C9 C7 KB7 sing 198 n n 
C7 N4 KB7 sing 199 n n 
N4 H2 KB7 sing 200 n n 
C1' H3 KB7 sing 201 n n 
C2' H4 KB7 sing 202 n n 
O2' H5 KB7 sing 203 n n 
C3' H6 KB7 sing 204 n n 
O3' H7 KB7 sing 205 n n 
C4' H8 KB7 sing 206 n n 
C5' H9 KB7 sing 207 n n 
C5' H10 KB7 sing 208 n n 
N2 H11 KB7 sing 209 n n 
N2 H12 KB7 sing 210 n n 
C8 H13 KB7 sing 211 n n 
C7 H14 KB7 sing 212 n n 
C7 H15 KB7 sing 213 n n 
C9 H16 KB7 sing 214 n n 
C9 H17 KB7 sing 215 n n 
C9 H18 KB7 sing 216 n n 
N1 H19 KB7 sing 217 n n 
#
_atom_sites.entry_id                     6N3V 
_atom_sites.fract_transf_matrix[1][1]    0.012833 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001114 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021595 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015694 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 KB7 A 1 201 1 KB7 829 . 
D 3 CL B 1 201 1 CL CL . 
E 4 HOH A 1 301 46 HOH HOH . 
E 4 HOH A 2 302 188 HOH HOH . 
E 4 HOH A 3 303 166 HOH HOH . 
E 4 HOH A 4 304 11 HOH HOH . 
E 4 HOH A 5 305 106 HOH HOH . 
E 4 HOH A 6 306 58 HOH HOH . 
E 4 HOH A 7 307 5 HOH HOH . 
E 4 HOH A 8 308 36 HOH HOH . 
E 4 HOH A 9 309 12 HOH HOH . 
E 4 HOH A 10 310 31 HOH HOH . 
E 4 HOH A 11 311 63 HOH HOH . 
E 4 HOH A 12 312 81 HOH HOH . 
E 4 HOH A 13 313 155 HOH HOH . 
E 4 HOH A 14 314 20 HOH HOH . 
E 4 HOH A 15 315 120 HOH HOH . 
E 4 HOH A 16 316 22 HOH HOH . 
E 4 HOH A 17 317 8 HOH HOH . 
E 4 HOH A 18 318 154 HOH HOH . 
E 4 HOH A 19 319 176 HOH HOH . 
E 4 HOH A 20 320 88 HOH HOH . 
E 4 HOH A 21 321 100 HOH HOH . 
E 4 HOH A 22 322 73 HOH HOH . 
E 4 HOH A 23 323 15 HOH HOH . 
E 4 HOH A 24 324 193 HOH HOH . 
E 4 HOH A 25 325 32 HOH HOH . 
E 4 HOH A 26 326 194 HOH HOH . 
E 4 HOH A 27 327 52 HOH HOH . 
E 4 HOH A 28 328 111 HOH HOH . 
E 4 HOH A 29 329 28 HOH HOH . 
E 4 HOH A 30 330 94 HOH HOH . 
E 4 HOH A 31 331 40 HOH HOH . 
E 4 HOH A 32 332 178 HOH HOH . 
E 4 HOH A 33 333 23 HOH HOH . 
E 4 HOH A 34 334 13 HOH HOH . 
E 4 HOH A 35 335 83 HOH HOH . 
E 4 HOH A 36 336 50 HOH HOH . 
E 4 HOH A 37 337 93 HOH HOH . 
E 4 HOH A 38 338 7 HOH HOH . 
E 4 HOH A 39 339 65 HOH HOH . 
E 4 HOH A 40 340 61 HOH HOH . 
E 4 HOH A 41 341 203 HOH HOH . 
E 4 HOH A 42 342 131 HOH HOH . 
E 4 HOH A 43 343 182 HOH HOH . 
E 4 HOH A 44 344 18 HOH HOH . 
E 4 HOH A 45 345 102 HOH HOH . 
E 4 HOH A 46 346 84 HOH HOH . 
E 4 HOH A 47 347 56 HOH HOH . 
E 4 HOH A 48 348 92 HOH HOH . 
E 4 HOH A 49 349 3 HOH HOH . 
E 4 HOH A 50 350 97 HOH HOH . 
E 4 HOH A 51 351 107 HOH HOH . 
E 4 HOH A 52 352 119 HOH HOH . 
E 4 HOH A 53 353 115 HOH HOH . 
E 4 HOH A 54 354 167 HOH HOH . 
E 4 HOH A 55 355 158 HOH HOH . 
E 4 HOH A 56 356 202 HOH HOH . 
E 4 HOH A 57 357 60 HOH HOH . 
E 4 HOH A 58 358 67 HOH HOH . 
E 4 HOH A 59 359 75 HOH HOH . 
E 4 HOH A 60 360 77 HOH HOH . 
E 4 HOH A 61 361 49 HOH HOH . 
E 4 HOH A 62 362 101 HOH HOH . 
E 4 HOH A 63 363 86 HOH HOH . 
E 4 HOH A 64 364 72 HOH HOH . 
E 4 HOH A 65 365 137 HOH HOH . 
E 4 HOH A 66 366 71 HOH HOH . 
E 4 HOH A 67 367 90 HOH HOH . 
E 4 HOH A 68 368 51 HOH HOH . 
E 4 HOH A 69 369 25 HOH HOH . 
E 4 HOH A 70 370 196 HOH HOH . 
E 4 HOH A 71 371 38 HOH HOH . 
E 4 HOH A 72 372 55 HOH HOH . 
E 4 HOH A 73 373 96 HOH HOH . 
E 4 HOH A 74 374 68 HOH HOH . 
E 4 HOH A 75 375 113 HOH HOH . 
E 4 HOH A 76 376 174 HOH HOH . 
E 4 HOH A 77 377 192 HOH HOH . 
E 4 HOH A 78 378 76 HOH HOH . 
E 4 HOH A 79 379 195 HOH HOH . 
E 4 HOH A 80 380 2 HOH HOH . 
E 4 HOH A 81 381 128 HOH HOH . 
E 4 HOH A 82 382 135 HOH HOH . 
E 4 HOH A 83 383 129 HOH HOH . 
E 4 HOH A 84 384 197 HOH HOH . 
E 4 HOH A 85 385 206 HOH HOH . 
E 4 HOH A 86 386 142 HOH HOH . 
E 4 HOH A 87 387 200 HOH HOH . 
E 4 HOH A 88 388 186 HOH HOH . 
E 4 HOH A 89 389 177 HOH HOH . 
E 4 HOH A 90 390 133 HOH HOH . 
E 4 HOH A 91 391 141 HOH HOH . 
E 4 HOH A 92 392 181 HOH HOH . 
E 4 HOH A 93 393 168 HOH HOH . 
E 4 HOH A 94 394 140 HOH HOH . 
E 4 HOH A 95 395 122 HOH HOH . 
E 4 HOH A 96 396 162 HOH HOH . 
E 4 HOH A 97 397 69 HOH HOH . 
E 4 HOH A 98 398 146 HOH HOH . 
F 4 HOH B 1 301 147 HOH HOH . 
F 4 HOH B 2 302 64 HOH HOH . 
F 4 HOH B 3 303 74 HOH HOH . 
F 4 HOH B 4 304 156 HOH HOH . 
F 4 HOH B 5 305 26 HOH HOH . 
F 4 HOH B 6 306 42 HOH HOH . 
F 4 HOH B 7 307 110 HOH HOH . 
F 4 HOH B 8 308 37 HOH HOH . 
F 4 HOH B 9 309 191 HOH HOH . 
F 4 HOH B 10 310 66 HOH HOH . 
F 4 HOH B 11 311 62 HOH HOH . 
F 4 HOH B 12 312 27 HOH HOH . 
F 4 HOH B 13 313 103 HOH HOH . 
F 4 HOH B 14 314 149 HOH HOH . 
F 4 HOH B 15 315 21 HOH HOH . 
F 4 HOH B 16 316 6 HOH HOH . 
F 4 HOH B 17 317 123 HOH HOH . 
F 4 HOH B 18 318 132 HOH HOH . 
F 4 HOH B 19 319 138 HOH HOH . 
F 4 HOH B 20 320 34 HOH HOH . 
F 4 HOH B 21 321 17 HOH HOH . 
F 4 HOH B 22 322 14 HOH HOH . 
F 4 HOH B 23 323 10 HOH HOH . 
F 4 HOH B 24 324 29 HOH HOH . 
F 4 HOH B 25 325 165 HOH HOH . 
F 4 HOH B 26 326 78 HOH HOH . 
F 4 HOH B 27 327 24 HOH HOH . 
F 4 HOH B 28 328 173 HOH HOH . 
F 4 HOH B 29 329 82 HOH HOH . 
F 4 HOH B 30 330 33 HOH HOH . 
F 4 HOH B 31 331 9 HOH HOH . 
F 4 HOH B 32 332 187 HOH HOH . 
F 4 HOH B 33 333 44 HOH HOH . 
F 4 HOH B 34 334 99 HOH HOH . 
F 4 HOH B 35 335 85 HOH HOH . 
F 4 HOH B 36 336 41 HOH HOH . 
F 4 HOH B 37 337 59 HOH HOH . 
F 4 HOH B 38 338 30 HOH HOH . 
F 4 HOH B 39 339 204 HOH HOH . 
F 4 HOH B 40 340 160 HOH HOH . 
F 4 HOH B 41 341 43 HOH HOH . 
F 4 HOH B 42 342 136 HOH HOH . 
F 4 HOH B 43 343 126 HOH HOH . 
F 4 HOH B 44 344 80 HOH HOH . 
F 4 HOH B 45 345 185 HOH HOH . 
F 4 HOH B 46 346 170 HOH HOH . 
F 4 HOH B 47 347 109 HOH HOH . 
F 4 HOH B 48 348 35 HOH HOH . 
F 4 HOH B 49 349 117 HOH HOH . 
F 4 HOH B 50 350 130 HOH HOH . 
F 4 HOH B 51 351 45 HOH HOH . 
F 4 HOH B 52 352 127 HOH HOH . 
F 4 HOH B 53 353 48 HOH HOH . 
F 4 HOH B 54 354 53 HOH HOH . 
F 4 HOH B 55 355 47 HOH HOH . 
F 4 HOH B 56 356 91 HOH HOH . 
F 4 HOH B 57 357 19 HOH HOH . 
F 4 HOH B 58 358 114 HOH HOH . 
F 4 HOH B 59 359 104 HOH HOH . 
F 4 HOH B 60 360 57 HOH HOH . 
F 4 HOH B 61 361 89 HOH HOH . 
F 4 HOH B 62 362 148 HOH HOH . 
F 4 HOH B 63 363 108 HOH HOH . 
F 4 HOH B 64 364 121 HOH HOH . 
F 4 HOH B 65 365 39 HOH HOH . 
F 4 HOH B 66 366 54 HOH HOH . 
F 4 HOH B 67 367 98 HOH HOH . 
F 4 HOH B 68 368 95 HOH HOH . 
F 4 HOH B 69 369 153 HOH HOH . 
F 4 HOH B 70 370 198 HOH HOH . 
F 4 HOH B 71 371 125 HOH HOH . 
F 4 HOH B 72 372 112 HOH HOH . 
F 4 HOH B 73 373 180 HOH HOH . 
F 4 HOH B 74 374 118 HOH HOH . 
F 4 HOH B 75 375 79 HOH HOH . 
F 4 HOH B 76 376 116 HOH HOH . 
F 4 HOH B 77 377 150 HOH HOH . 
F 4 HOH B 78 378 105 HOH HOH . 
F 4 HOH B 79 379 189 HOH HOH . 
F 4 HOH B 80 380 171 HOH HOH . 
F 4 HOH B 81 381 205 HOH HOH . 
F 4 HOH B 82 382 145 HOH HOH . 
F 4 HOH B 83 383 199 HOH HOH . 
F 4 HOH B 84 384 161 HOH HOH . 
F 4 HOH B 85 385 157 HOH HOH . 
F 4 HOH B 86 386 201 HOH HOH . 
F 4 HOH B 87 387 87 HOH HOH . 
F 4 HOH B 88 388 144 HOH HOH . 
F 4 HOH B 89 389 190 HOH HOH . 
F 4 HOH B 90 390 183 HOH HOH . 
F 4 HOH B 91 391 184 HOH HOH . 
F 4 HOH B 92 392 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 KB7 . . . C 2 -27.395 4.731 -33.996 1 12.66 ? N1 KB7 201 A 1 
HETATM 2 C C2 KB7 . . . C 2 -26.672 5.013 -32.896 1 11.3 ? C2 KB7 201 A 1 
HETATM 3 O O2 KB7 . . . C 2 -32.19 3.414 -24.203 1 13.2 ? O2 KB7 201 A 1 
HETATM 4 N N3 KB7 . . . C 2 -27.232 5.222 -31.675 1 11.54 ? N3 KB7 201 A 1 
HETATM 5 C C4 KB7 . . . C 2 -28.574 5.119 -31.533 1 12 ? C4 KB7 201 A 1 
HETATM 6 N N4 KB7 . . . C 2 -31.924 5.378 -23.093 1 16.91 ? N4 KB7 201 A 1 
HETATM 7 C C5 KB7 . . . C 2 -29.417 4.802 -32.69 1 14.44 ? C5 KB7 201 A 1 
HETATM 8 C C6 KB7 . . . C 2 -28.73 4.606 -33.977 1 14.75 ? C6 KB7 201 A 1 
HETATM 9 C C1' KB7 . . . C 2 -29.015 5.592 -29.161 1 11.23 ? C1' KB7 201 A 1 
HETATM 10 C C2' KB7 . . . C 2 -29.798 6.783 -28.623 1 10.8 ? C2' KB7 201 A 1 
HETATM 11 O O2' KB7 . . . C 2 -29.273 8.02 -29.067 1 12.92 ? O2' KB7 201 A 1 
HETATM 12 C C3' KB7 . . . C 2 -29.758 6.547 -27.102 1 12.57 ? C3' KB7 201 A 1 
HETATM 13 O O3' KB7 . . . C 2 -28.741 7.337 -26.477 1 11.62 ? O3' KB7 201 A 1 
HETATM 14 C C4' KB7 . . . C 2 -29.423 5.055 -26.973 1 11.53 ? C4' KB7 201 A 1 
HETATM 15 O O4' KB7 . . . C 2 -29.351 4.536 -28.314 1 12.19 ? O4' KB7 201 A 1 
HETATM 16 C C5' KB7 . . . C 2 -30.421 4.267 -26.186 1 13.11 ? C5' KB7 201 A 1 
HETATM 17 O O6 KB7 . . . C 2 -29.388 4.346 -35.015 1 16.47 ? O6 KB7 201 A 1 
HETATM 18 N N2 KB7 . . . C 2 -25.331 5.113 -33.02 1 13.32 ? N2 KB7 201 A 1 
HETATM 19 N N7 KB7 . . . C 2 -30.693 4.766 -32.26 1 15.55 ? N7 KB7 201 A 1 
HETATM 20 C C8 KB7 . . . C 2 -30.677 5.04 -30.933 1 13.93 ? C8 KB7 201 A 1 
HETATM 21 N N9 KB7 . . . C 2 -29.413 5.241 -30.514 1 13.05 ? N9 KB7 201 A 1 
HETATM 22 O O5' KB7 . . . C 2 -30.568 4.871 -24.912 1 13.16 ? O5' KB7 201 A 1 
HETATM 23 C C1 KB7 . . . C 2 -31.636 4.487 -24.031 1 12.35 ? C1 KB7 201 A 1 
HETATM 24 C C7 KB7 . . . C 2 -31.357 6.72 -23.184 1 16.6 ? C7 KB7 201 A 1 
HETATM 25 C C9 KB7 . . . C 2 -32.279 7.688 -23.897 1 17.24 ? C9 KB7 201 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           224 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           25 
#