data_6N4K # _model_server_result.job_id yMgAl1u5ZBG7lKsbSixvjg _model_server_result.datetime_utc '2025-02-18 18:05:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6N4K # _exptl.entry_id 6N4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.58 _cell.angle_gamma 90 _cell.entry_id 6N4K _cell.length_a 103.62 _cell.length_b 45.199 _cell.length_c 108.772 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 97 A CYS 97 1_555 C FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc2 A SG CYS 132 A CYS 132 1_555 C FE2 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc3 C FE3 SF4 . A SF4 301 1_555 B SG CYS 97 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc4 C FE4 SF4 . A SF4 301 1_555 B SG CYS 132 B CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 6N4K _atom_sites.fract_transf_matrix[1][1] 0.009651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001114 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009255 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 301 1 SF4 SF4 . D 3 HOH A 1 401 3 HOH HOH . D 3 HOH A 2 402 37 HOH HOH . D 3 HOH A 3 403 32 HOH HOH . D 3 HOH A 4 404 11 HOH HOH . D 3 HOH A 5 405 23 HOH HOH . D 3 HOH A 6 406 22 HOH HOH . D 3 HOH A 7 407 29 HOH HOH . D 3 HOH A 8 408 7 HOH HOH . D 3 HOH A 9 409 42 HOH HOH . D 3 HOH A 10 410 4 HOH HOH . D 3 HOH A 11 411 45 HOH HOH . D 3 HOH A 12 412 28 HOH HOH . D 3 HOH A 13 413 12 HOH HOH . D 3 HOH A 14 414 1 HOH HOH . D 3 HOH A 15 415 40 HOH HOH . D 3 HOH A 16 416 15 HOH HOH . D 3 HOH A 17 417 38 HOH HOH . D 3 HOH A 18 418 19 HOH HOH . D 3 HOH A 19 419 41 HOH HOH . D 3 HOH A 20 420 9 HOH HOH . D 3 HOH A 21 421 8 HOH HOH . D 3 HOH A 22 422 17 HOH HOH . D 3 HOH A 23 423 6 HOH HOH . D 3 HOH A 24 424 21 HOH HOH . D 3 HOH A 25 425 31 HOH HOH . E 3 HOH B 1 301 48 HOH HOH . E 3 HOH B 2 302 35 HOH HOH . E 3 HOH B 3 303 39 HOH HOH . E 3 HOH B 4 304 20 HOH HOH . E 3 HOH B 5 305 26 HOH HOH . E 3 HOH B 6 306 2 HOH HOH . E 3 HOH B 7 307 34 HOH HOH . E 3 HOH B 8 308 14 HOH HOH . E 3 HOH B 9 309 10 HOH HOH . E 3 HOH B 10 310 18 HOH HOH . E 3 HOH B 11 311 47 HOH HOH . E 3 HOH B 12 312 24 HOH HOH . E 3 HOH B 13 313 5 HOH HOH . E 3 HOH B 14 314 43 HOH HOH . E 3 HOH B 15 315 25 HOH HOH . E 3 HOH B 16 316 46 HOH HOH . E 3 HOH B 17 317 16 HOH HOH . E 3 HOH B 18 318 44 HOH HOH . E 3 HOH B 19 319 13 HOH HOH . E 3 HOH B 20 320 33 HOH HOH . E 3 HOH B 21 321 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . C 2 -27.305 2.608 28.685 1 18.32 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . . . C 2 -26.443 0.624 27.176 1 17.93 ? FE2 SF4 301 A 1 HETATM 3 FE FE3 SF4 . . . C 2 -27.708 2.721 26.034 1 19.08 ? FE3 SF4 301 A 1 HETATM 4 FE FE4 SF4 . . . C 2 -29.044 0.969 27.487 1 18.28 ? FE4 SF4 301 A 1 HETATM 5 S S1 SF4 . . . C 2 -27.963 0.554 25.57 1 19.07 ? S1 SF4 301 A 1 HETATM 6 S S2 SF4 . . . C 2 -29.182 3.211 27.658 1 18.5 ? S2 SF4 301 A 1 HETATM 7 S S3 SF4 . . . C 2 -27.619 0.442 29.084 1 18.26 ? S3 SF4 301 A 1 HETATM 8 S S4 SF4 . . . C 2 -25.736 2.725 27.066 1 18.73 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #