data_6N4T # _model_server_result.job_id cztfCD28oLaozom_QagynA _model_server_result.datetime_utc '2024-11-26 16:41:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n4t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6N4T # _exptl.entry_id 6N4T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N4T _cell.length_a 67.029 _cell.length_b 141.519 _cell.length_c 52.109 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N4T _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 162 A CYS 168 1_555 A SG CYS 176 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 187 A CYS 191 1_555 A SG CYS 216 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A OE1 GLU 9 A GLU 24 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? covale ? covale1 A SG CYS 117 A CYS 122 1_555 D SG2 GSH . A GSH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? covale ? covale2 A OG SER 191 A SER 195 1_555 E C40 KD7 . A KD7 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.397 ? metalc ? metalc2 A OE1 GLU 9 A GLU 24 1_555 B MG MG . A MG 301 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc3 A OE2 GLU 9 A GLU 24 1_555 B MG MG . A MG 301 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6N4T _atom_sites.fract_transf_matrix[1][1] 0.014919 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 1 MG MG . C 3 EOH A 1 302 1 EOH EOH . D 4 GSH A 1 303 2 GSH GSH . E 5 KD7 A 1 304 1 KD7 LIG . F 6 144 A 1 305 1 144 144 . G 7 HOH A 1 401 117 HOH HOH . G 7 HOH A 2 402 339 HOH HOH . G 7 HOH A 3 403 331 HOH HOH . G 7 HOH A 4 404 21 HOH HOH . G 7 HOH A 5 405 307 HOH HOH . G 7 HOH A 6 406 335 HOH HOH . G 7 HOH A 7 407 53 HOH HOH . G 7 HOH A 8 408 188 HOH HOH . G 7 HOH A 9 409 278 HOH HOH . G 7 HOH A 10 410 290 HOH HOH . G 7 HOH A 11 411 181 HOH HOH . G 7 HOH A 12 412 37 HOH HOH . G 7 HOH A 13 413 296 HOH HOH . G 7 HOH A 14 414 102 HOH HOH . G 7 HOH A 15 415 162 HOH HOH . G 7 HOH A 16 416 291 HOH HOH . G 7 HOH A 17 417 323 HOH HOH . G 7 HOH A 18 418 135 HOH HOH . G 7 HOH A 19 419 42 HOH HOH . G 7 HOH A 20 420 311 HOH HOH . G 7 HOH A 21 421 116 HOH HOH . G 7 HOH A 22 422 321 HOH HOH . G 7 HOH A 23 423 340 HOH HOH . G 7 HOH A 24 424 183 HOH HOH . G 7 HOH A 25 425 208 HOH HOH . G 7 HOH A 26 426 104 HOH HOH . G 7 HOH A 27 427 203 HOH HOH . G 7 HOH A 28 428 320 HOH HOH . G 7 HOH A 29 429 46 HOH HOH . G 7 HOH A 30 430 334 HOH HOH . G 7 HOH A 31 431 345 HOH HOH . G 7 HOH A 32 432 17 HOH HOH . G 7 HOH A 33 433 18 HOH HOH . G 7 HOH A 34 434 165 HOH HOH . G 7 HOH A 35 435 326 HOH HOH . G 7 HOH A 36 436 11 HOH HOH . G 7 HOH A 37 437 332 HOH HOH . G 7 HOH A 38 438 265 HOH HOH . G 7 HOH A 39 439 174 HOH HOH . G 7 HOH A 40 440 49 HOH HOH . G 7 HOH A 41 441 56 HOH HOH . G 7 HOH A 42 442 110 HOH HOH . G 7 HOH A 43 443 253 HOH HOH . G 7 HOH A 44 444 48 HOH HOH . G 7 HOH A 45 445 87 HOH HOH . G 7 HOH A 46 446 295 HOH HOH . G 7 HOH A 47 447 199 HOH HOH . G 7 HOH A 48 448 122 HOH HOH . G 7 HOH A 49 449 109 HOH HOH . G 7 HOH A 50 450 16 HOH HOH . G 7 HOH A 51 451 308 HOH HOH . G 7 HOH A 52 452 153 HOH HOH . G 7 HOH A 53 453 144 HOH HOH . G 7 HOH A 54 454 8 HOH HOH . G 7 HOH A 55 455 34 HOH HOH . G 7 HOH A 56 456 132 HOH HOH . G 7 HOH A 57 457 83 HOH HOH . G 7 HOH A 58 458 79 HOH HOH . G 7 HOH A 59 459 182 HOH HOH . G 7 HOH A 60 460 148 HOH HOH . G 7 HOH A 61 461 30 HOH HOH . G 7 HOH A 62 462 231 HOH HOH . G 7 HOH A 63 463 143 HOH HOH . G 7 HOH A 64 464 195 HOH HOH . G 7 HOH A 65 465 108 HOH HOH . G 7 HOH A 66 466 39 HOH HOH . G 7 HOH A 67 467 129 HOH HOH . G 7 HOH A 68 468 6 HOH HOH . G 7 HOH A 69 469 318 HOH HOH . G 7 HOH A 70 470 186 HOH HOH . G 7 HOH A 71 471 106 HOH HOH . G 7 HOH A 72 472 179 HOH HOH . G 7 HOH A 73 473 173 HOH HOH . G 7 HOH A 74 474 280 HOH HOH . G 7 HOH A 75 475 25 HOH HOH . G 7 HOH A 76 476 315 HOH HOH . G 7 HOH A 77 477 166 HOH HOH . G 7 HOH A 78 478 60 HOH HOH . G 7 HOH A 79 479 84 HOH HOH . G 7 HOH A 80 480 243 HOH HOH . G 7 HOH A 81 481 59 HOH HOH . G 7 HOH A 82 482 327 HOH HOH . G 7 HOH A 83 483 4 HOH HOH . G 7 HOH A 84 484 293 HOH HOH . G 7 HOH A 85 485 112 HOH HOH . G 7 HOH A 86 486 343 HOH HOH . G 7 HOH A 87 487 338 HOH HOH . G 7 HOH A 88 488 152 HOH HOH . G 7 HOH A 89 489 328 HOH HOH . G 7 HOH A 90 490 248 HOH HOH . G 7 HOH A 91 491 1 HOH HOH . G 7 HOH A 92 492 23 HOH HOH . G 7 HOH A 93 493 342 HOH HOH . G 7 HOH A 94 494 140 HOH HOH . G 7 HOH A 95 495 80 HOH HOH . G 7 HOH A 96 496 172 HOH HOH . G 7 HOH A 97 497 101 HOH HOH . G 7 HOH A 98 498 310 HOH HOH . G 7 HOH A 99 499 283 HOH HOH . G 7 HOH A 100 500 322 HOH HOH . G 7 HOH A 101 501 289 HOH HOH . G 7 HOH A 102 502 71 HOH HOH . G 7 HOH A 103 503 61 HOH HOH . G 7 HOH A 104 504 210 HOH HOH . G 7 HOH A 105 505 287 HOH HOH . G 7 HOH A 106 506 211 HOH HOH . G 7 HOH A 107 507 303 HOH HOH . G 7 HOH A 108 508 336 HOH HOH . G 7 HOH A 109 509 313 HOH HOH . G 7 HOH A 110 510 299 HOH HOH . G 7 HOH A 111 511 314 HOH HOH . G 7 HOH A 112 512 22 HOH HOH . G 7 HOH A 113 513 138 HOH HOH . G 7 HOH A 114 514 294 HOH HOH . G 7 HOH A 115 515 268 HOH HOH . G 7 HOH A 116 516 51 HOH HOH . G 7 HOH A 117 517 329 HOH HOH . G 7 HOH A 118 518 330 HOH HOH . G 7 HOH A 119 519 130 HOH HOH . G 7 HOH A 120 520 36 HOH HOH . G 7 HOH A 121 521 341 HOH HOH . G 7 HOH A 122 522 297 HOH HOH . G 7 HOH A 123 523 105 HOH HOH . G 7 HOH A 124 524 272 HOH HOH . G 7 HOH A 125 525 127 HOH HOH . G 7 HOH A 126 526 119 HOH HOH . G 7 HOH A 127 527 175 HOH HOH . G 7 HOH A 128 528 269 HOH HOH . G 7 HOH A 129 529 302 HOH HOH . G 7 HOH A 130 530 54 HOH HOH . G 7 HOH A 131 531 276 HOH HOH . G 7 HOH A 132 532 168 HOH HOH . G 7 HOH A 133 533 125 HOH HOH . G 7 HOH A 134 534 227 HOH HOH . G 7 HOH A 135 535 200 HOH HOH . G 7 HOH A 136 536 111 HOH HOH . G 7 HOH A 137 537 141 HOH HOH . G 7 HOH A 138 538 139 HOH HOH . G 7 HOH A 139 539 217 HOH HOH . G 7 HOH A 140 540 274 HOH HOH . G 7 HOH A 141 541 64 HOH HOH . G 7 HOH A 142 542 251 HOH HOH . G 7 HOH A 143 543 337 HOH HOH . G 7 HOH A 144 544 306 HOH HOH . G 7 HOH A 145 545 177 HOH HOH . G 7 HOH A 146 546 288 HOH HOH . G 7 HOH A 147 547 344 HOH HOH . G 7 HOH A 148 548 333 HOH HOH . G 7 HOH A 149 549 267 HOH HOH . G 7 HOH A 150 550 325 HOH HOH . G 7 HOH A 151 551 158 HOH HOH . G 7 HOH A 152 552 113 HOH HOH . G 7 HOH A 153 553 285 HOH HOH . G 7 HOH A 154 554 63 HOH HOH . G 7 HOH A 155 555 298 HOH HOH . G 7 HOH A 156 556 316 HOH HOH . G 7 HOH A 157 557 170 HOH HOH . G 7 HOH A 158 558 238 HOH HOH . G 7 HOH A 159 559 346 HOH HOH . G 7 HOH A 160 560 240 HOH HOH . G 7 HOH A 161 561 286 HOH HOH . G 7 HOH A 162 562 241 HOH HOH . G 7 HOH A 163 563 324 HOH HOH . G 7 HOH A 164 564 230 HOH HOH . G 7 HOH A 165 565 221 HOH HOH . G 7 HOH A 166 566 239 HOH HOH . G 7 HOH A 167 567 300 HOH HOH . G 7 HOH A 168 568 262 HOH HOH . G 7 HOH A 169 569 312 HOH HOH . G 7 HOH A 170 570 150 HOH HOH . G 7 HOH A 171 571 242 HOH HOH . G 7 HOH A 172 572 136 HOH HOH . G 7 HOH A 173 573 103 HOH HOH . G 7 HOH A 174 574 249 HOH HOH . G 7 HOH A 175 575 317 HOH HOH . G 7 HOH A 176 576 176 HOH HOH . G 7 HOH A 177 577 146 HOH HOH . G 7 HOH A 178 578 284 HOH HOH . G 7 HOH A 179 579 319 HOH HOH . G 7 HOH A 180 580 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . D 4 -13.431 -28.239 -2.611 1 52.98 ? N1 GSH 303 A 1 HETATM 2 C CA1 GSH . . . D 4 -13.959 -29.045 -1.525 1 59.5 ? CA1 GSH 303 A 1 HETATM 3 C C1 GSH . . . D 4 -14.509 -30.356 -2.088 1 70.76 ? C1 GSH 303 A 1 HETATM 4 O O11 GSH . . . D 4 -14.042 -30.82 -3.165 1 76.83 ? O11 GSH 303 A 1 HETATM 5 O O12 GSH . . . D 4 -15.428 -30.971 -1.479 1 66.61 ? O12 GSH 303 A 1 HETATM 6 C CB1 GSH . . . D 4 -15.077 -28.275 -0.819 1 52.03 ? CB1 GSH 303 A 1 HETATM 7 C CG1 GSH . . . D 4 -15.472 -28.901 0.516 1 38.52 ? CG1 GSH 303 A 1 HETATM 8 C CD1 GSH . . . D 4 -15.326 -27.915 1.673 1 37.54 ? CD1 GSH 303 A 1 HETATM 9 O OE1 GSH . . . D 4 -14.855 -26.836 1.51 1 34.37 ? OE1 GSH 303 A 1 HETATM 10 N N2 GSH . . . D 4 -15.76 -28.299 2.994 1 28.62 ? N2 GSH 303 A 1 HETATM 11 C CA2 GSH . . . D 4 -15.603 -27.342 4.07 1 24.05 ? CA2 GSH 303 A 1 HETATM 12 C C2 GSH . . . D 4 -14.661 -27.929 5.108 1 24.74 ? C2 GSH 303 A 1 HETATM 13 O O2 GSH . . . D 4 -14.442 -29.098 5.111 1 23.93 ? O2 GSH 303 A 1 HETATM 14 C CB2 GSH . . . D 4 -16.961 -27.116 4.746 1 19.16 ? CB2 GSH 303 A 1 HETATM 15 S SG2 GSH . . . D 4 -17.576 -28.65 5.523 1 26.68 ? SG2 GSH 303 A 1 HETATM 16 N N3 GSH . . . D 4 -14.082 -27.032 6.09 1 18.47 ? N3 GSH 303 A 1 HETATM 17 C CA3 GSH . . . D 4 -13.226 -27.457 7.181 1 17.16 ? CA3 GSH 303 A 1 HETATM 18 C C3 GSH . . . D 4 -11.817 -27.866 6.804 1 23.92 ? C3 GSH 303 A 1 HETATM 19 O O31 GSH . . . D 4 -11.361 -27.679 5.641 1 23.9 ? O31 GSH 303 A 1 HETATM 20 O O32 GSH . . . D 4 -11.116 -28.387 7.707 1 21.1 ? O32 GSH 303 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 20 #