data_6N50 # _model_server_result.job_id i5sN5L0fBZPgudo1LFT33g _model_server_result.datetime_utc '2024-11-04 22:33:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":602}' # _entry.id 6N50 # _exptl.entry_id 6N50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.126 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N50 _cell.length_a 150.433 _cell.length_b 157.159 _cell.length_c 208.112 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G 1 1 B,H,I 2 1 C,J,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 I N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 57 1_555 A SG CYS 116 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 258 A CYS 241 1_555 A SG CYS 547 A CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 293 A CYS 276 1_555 A SG CYS 295 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 382 A CYS 365 1_555 A SG CYS 398 A CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 436 A CYS 419 1_555 A SG CYS 443 A CYS 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 A SG CYS 528 A CYS 511 1_555 A SG CYS 548 A CYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 A SG CYS 532 A CYS 515 1_555 A SG CYS 551 A CYS 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 A SG CYS 554 A CYS 537 1_555 A SG CYS 566 A CYS 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf9 A SG CYS 569 A CYS 552 1_555 A SG CYS 582 A CYS 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 B SG CYS 74 B CYS 57 1_555 B SG CYS 116 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 B SG CYS 293 B CYS 276 1_555 B SG CYS 295 B CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf12 B SG CYS 382 B CYS 365 1_555 B SG CYS 398 B CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf13 B SG CYS 436 B CYS 419 1_555 B SG CYS 443 B CYS 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf14 C SG CYS 74 C CYS 57 1_555 C SG CYS 116 C CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf15 C SG CYS 258 C CYS 241 1_555 C SG CYS 547 C CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf16 C SG CYS 293 C CYS 276 1_555 C SG CYS 295 C CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf17 C SG CYS 382 C CYS 365 1_555 C SG CYS 398 C CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf18 C SG CYS 436 C CYS 419 1_555 C SG CYS 443 C CYS 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf19 C SG CYS 528 C CYS 511 1_555 C SG CYS 548 C CYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf20 C SG CYS 532 C CYS 515 1_555 C SG CYS 551 C CYS 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf21 C SG CYS 554 C CYS 537 1_555 C SG CYS 566 C CYS 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf22 C SG CYS 569 C CYS 552 1_555 C SG CYS 582 C CYS 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf23 D SG CYS 22 E CYS 24 1_555 D SG CYS 96 E CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A ND2 ASN 227 A ASN 210 1_555 E C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 A ND2 ASN 462 A ASN 445 1_555 F C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale3 B ND2 ASN 227 B ASN 210 1_555 H C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 C ND2 ASN 227 C ASN 210 1_555 J C1 NAG . C NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale5 C ND2 ASN 462 C ASN 445 1_555 K C1 NAG . C NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? # _chem_comp.formula 'C5 H7 N3 O5' _chem_comp.formula_weight 189.126 _chem_comp.id QUS _chem_comp.mon_nstd_flag . _chem_comp.name '(S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms QUISQUALATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 QUS sing 305 n n C01 O16 QUS doub 306 n n C01 O17 QUS sing 307 n n C02 C03 QUS sing 308 n n C02 NP3 QUS sing 309 n n C02 H02 QUS sing 310 n n C03 N14 QUS sing 311 n n C03 H031 QUS sing 312 n n C03 H032 QUS sing 313 n n C04 N14 QUS sing 314 n y C04 N15 QUS sing 315 n y C04 O18 QUS doub 316 n n C05 N15 QUS sing 317 n y C05 O19 QUS doub 318 n n C05 O20 QUS sing 319 n y NP3 HP31 QUS sing 320 n n NP3 HP32 QUS sing 321 n n N14 O20 QUS sing 322 n y N15 H15 QUS sing 323 n n O17 H17 QUS sing 324 n n # _atom_sites.entry_id 6N50 _atom_sites.fract_transf_matrix[1][1] 0.006647 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004805 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NAG A 1 601 2 NAG NAG . F 3 NAG A 1 602 5 NAG NAG . G 4 QUS A 1 603 1 QUS QUS . H 3 NAG B 1 601 6 NAG NAG . I 4 QUS B 1 602 3 QUS QUS . J 3 NAG C 1 601 1 NAG NAG . K 3 NAG C 1 602 7 NAG NAG . L 4 QUS C 1 603 2 QUS QUS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 QUS . . . I 4 2.672 14.056 52.943 1 146.85 ? C01 QUS 602 B 1 HETATM 2 C C02 QUS . . . I 4 3.174 15.235 53.773 1 149.14 ? C02 QUS 602 B 1 HETATM 3 C C03 QUS . . . I 4 1.979 15.968 54.377 1 152.37 ? C03 QUS 602 B 1 HETATM 4 C C04 QUS . . . I 4 1.991 17.843 55.985 1 157.39 ? C04 QUS 602 B 1 HETATM 5 C C05 QUS . . . I 4 3.277 17.044 57.527 1 156.39 ? C05 QUS 602 B 1 HETATM 6 N NP3 QUS . . . I 4 3.922 16.14 52.921 1 148.52 ? NP3 QUS 602 B 1 HETATM 7 N N14 QUS . . . I 4 2.368 16.631 55.609 1 155.46 ? N14 QUS 602 B 1 HETATM 8 N N15 QUS . . . I 4 2.553 18.102 57.172 1 157.45 ? N15 QUS 602 B 1 HETATM 9 O O16 QUS . . . I 4 2.778 14.077 51.688 1 145.73 ? O16 QUS 602 B 1 HETATM 10 O O17 QUS . . . I 4 2.15 13.062 53.514 1 146.38 ? O17 QUS 602 B 1 HETATM 11 O O18 QUS . . . I 4 1.282 18.572 55.377 1 158.28 ? O18 QUS 602 B 1 HETATM 12 O O19 QUS . . . I 4 3.907 16.939 58.525 1 155.95 ? O19 QUS 602 B 1 HETATM 13 O O20 QUS . . . I 4 3.168 16.13 56.565 1 155.91 ? O20 QUS 602 B 1 # _model_server_stats.io_time_ms 119 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #