data_6N57 # _model_server_result.job_id Z-HXhBjQY4oOQBN7_OyR1g _model_server_result.datetime_utc '2024-11-16 19:39:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n57 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1504}' # _entry.id 6N57 # _exptl.entry_id 6N57 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 631.884 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHAPSO _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N57 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N57 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 H N N ? 7 L N N ? 7 M N N ? 7 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D SG CYS 70 J CYS 70 1_555 K ZN ZN . J ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc2 D SG CYS 72 J CYS 72 1_555 K ZN ZN . J ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc3 D SG CYS 85 J CYS 85 1_555 K ZN ZN . J ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc4 D SG CYS 88 J CYS 88 1_555 K ZN ZN . J ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc5 D OD1 ASP 460 J ASP 460 1_555 J MG MG . J MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc6 D OD1 ASP 462 J ASP 462 1_555 J MG MG . J MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc7 D OD2 ASP 462 J ASP 462 1_555 J MG MG . J MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.91 ? metalc ? metalc8 D OD1 ASP 464 J ASP 464 1_555 J MG MG . J MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc9 D OD2 ASP 464 J ASP 464 1_555 J MG MG . J MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc10 D SG CYS 814 J CYS 814 1_555 I ZN ZN . J ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.882 ? metalc ? metalc11 D SG CYS 888 J CYS 888 1_555 I ZN ZN . J ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc12 D SG CYS 895 J CYS 895 1_555 I ZN ZN . J ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc13 D SG CYS 898 J CYS 898 1_555 I ZN ZN . J ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc14 G SG CYS 36 M CYS 37 1_555 N ZN ZN . M ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc15 G SG CYS 39 M CYS 40 1_555 N ZN ZN . M ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? metalc ? metalc16 G SG CYS 57 M CYS 58 1_555 N ZN ZN . M ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? # _chem_comp.formula 'C32 H59 N2 O8 S 1' _chem_comp.formula_weight 631.884 _chem_comp.id 1N7 _chem_comp.mon_nstd_flag . _chem_comp.name CHAPSO _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-hydroxy-N,N-dimethyl-3-sulfo-N-(3-{[(3beta,5beta,7beta,12beta)-3,7,12-trihydroxy-24-oxocholan-24-yl]amino}propyl)propan-1-aminium # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C24 1N7 sing 1 n n C24 O1 1N7 doub 2 n n C24 C23 1N7 sing 3 n n C23 C22 1N7 sing 4 n n O2 C13 1N7 sing 5 n n O4 C4 1N7 sing 6 n n O3 C17 1N7 sing 7 n n C22 C20 1N7 sing 8 n n C21 C20 1N7 sing 9 n n C9 C8 1N7 sing 10 n n C9 C20 1N7 sing 11 n n C9 C5 1N7 sing 12 n n C8 C7 1N7 sing 13 n n C13 C14 1N7 sing 14 n n C13 C12 1N7 sing 15 n n C14 C15 1N7 sing 16 n n C6 C7 1N7 sing 17 n n C6 C5 1N7 sing 18 n n C6 C18 1N7 sing 19 n n C4 C5 1N7 sing 20 n n C4 C3 1N7 sing 21 n n C12 C1 1N7 sing 22 n n C5 C10 1N7 sing 23 n n C17 C18 1N7 sing 24 n n C17 C16 1N7 sing 25 n n C19 C3 1N7 sing 26 n n C19 C18 1N7 sing 27 n n C19 C2 1N7 sing 28 n n C15 C16 1N7 sing 29 n n C15 C2 1N7 sing 30 n n C1 C2 1N7 sing 31 n n C2 C11 1N7 sing 32 n n C1 H1 1N7 sing 33 n n C1 H2 1N7 sing 34 n n C3 H3 1N7 sing 35 n n C3 H4 1N7 sing 36 n n C4 H5 1N7 sing 37 n n C6 H6 1N7 sing 38 n n C7 H7 1N7 sing 39 n n C7 H8 1N7 sing 40 n n C8 H9 1N7 sing 41 n n C8 H10 1N7 sing 42 n n C9 H11 1N7 sing 43 n n C10 H12 1N7 sing 44 n n C10 H13 1N7 sing 45 n n C10 H14 1N7 sing 46 n n C11 H15 1N7 sing 47 n n C11 H16 1N7 sing 48 n n C11 H17 1N7 sing 49 n n C12 H18 1N7 sing 50 n n C12 H19 1N7 sing 51 n n C13 H20 1N7 sing 52 n n C14 H21 1N7 sing 53 n n C14 H22 1N7 sing 54 n n C15 H23 1N7 sing 55 n n C16 H24 1N7 sing 56 n n C16 H25 1N7 sing 57 n n C17 H26 1N7 sing 58 n n C18 H27 1N7 sing 59 n n C19 H28 1N7 sing 60 n n C20 H29 1N7 sing 61 n n C21 H30 1N7 sing 62 n n C21 H31 1N7 sing 63 n n C21 H32 1N7 sing 64 n n C22 H33 1N7 sing 65 n n C22 H34 1N7 sing 66 n n C23 H35 1N7 sing 67 n n C23 H36 1N7 sing 68 n n N1 H41 1N7 sing 69 n n O2 H43 1N7 sing 70 n n O3 H44 1N7 sing 71 n n O4 H45 1N7 sing 72 n n N1 C25 1N7 sing 73 n n C25 C26 1N7 sing 74 n n C26 C27 1N7 sing 75 n n C27 N2 1N7 sing 76 n n N2 C28 1N7 sing 77 n n N2 C29 1N7 sing 78 n n N2 C30 1N7 sing 79 n n C28 C31 1N7 sing 80 n n C31 C32 1N7 sing 81 n n C31 O5 1N7 sing 82 n n C32 S1 1N7 sing 83 n n S1 O7 1N7 doub 84 n n S1 O8 1N7 sing 85 n n S1 O6 1N7 doub 86 n n C25 H37 1N7 sing 87 n n C25 H38 1N7 sing 88 n n C26 H39 1N7 sing 89 n n C26 H40 1N7 sing 90 n n C27 H42 1N7 sing 91 n n C27 H46 1N7 sing 92 n n C28 H47 1N7 sing 93 n n C28 H48 1N7 sing 94 n n C29 H49 1N7 sing 95 n n C29 H50 1N7 sing 96 n n C29 H51 1N7 sing 97 n n C30 H52 1N7 sing 98 n n C30 H53 1N7 sing 99 n n C30 H54 1N7 sing 100 n n C31 H55 1N7 sing 101 n n C32 H56 1N7 sing 102 n n C32 H57 1N7 sing 103 n n O5 H58 1N7 sing 104 n n O8 H59 1N7 sing 105 n n # _atom_sites.entry_id 6N57 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 7 1N7 I 1 1401 4 1N7 1N7 . I 8 ZN J 1 1501 1410 ZN ZN . J 9 MG J 1 1502 1408 MG MG . K 8 ZN J 1 1503 1409 ZN ZN . L 7 1N7 J 1 1504 2 1N7 1N7 . M 7 1N7 L 1 701 1 1N7 1N7 . N 8 ZN M 1 101 101 ZN ZN . O 7 1N7 M 1 102 3 1N7 1N7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1N7 . . . L 7 175.137 149.08 184.029 1 59.58 ? C1 1N7 1504 J 1 HETATM 2 C C2 1N7 . . . L 7 174.949 149.489 182.522 1 59.58 ? C2 1N7 1504 J 1 HETATM 3 C C3 1N7 . . . L 7 174.786 152.107 183.249 1 59.58 ? C3 1N7 1504 J 1 HETATM 4 C C4 1N7 . . . L 7 174.201 153.579 182.578 1 59.58 ? C4 1N7 1504 J 1 HETATM 5 C C5 1N7 . . . L 7 174.213 153.518 181.18 1 59.58 ? C5 1N7 1504 J 1 HETATM 6 C C6 1N7 . . . L 7 173.379 152.368 180.729 1 59.58 ? C6 1N7 1504 J 1 HETATM 7 C C7 1N7 . . . L 7 173.186 152.661 179.174 1 59.58 ? C7 1N7 1504 J 1 HETATM 8 C C8 1N7 . . . L 7 173.068 154.339 179.133 1 59.58 ? C8 1N7 1504 J 1 HETATM 9 C C9 1N7 . . . L 7 173.554 154.824 180.482 1 59.58 ? C9 1N7 1504 J 1 HETATM 10 C C10 1N7 . . . L 7 175.707 153.417 180.7 1 59.58 ? C10 1N7 1504 J 1 HETATM 11 C C11 1N7 . . . L 7 176.444 149.699 182.125 1 59.58 ? C11 1N7 1504 J 1 HETATM 12 C C12 1N7 . . . L 7 173.943 148.301 184.645 1 59.58 ? C12 1N7 1504 J 1 HETATM 13 C C13 1N7 . . . L 7 173.758 147.037 183.776 1 59.58 ? C13 1N7 1504 J 1 HETATM 14 C C14 1N7 . . . L 7 173.221 147.557 182.432 1 59.58 ? C14 1N7 1504 J 1 HETATM 15 C C15 1N7 . . . L 7 174.323 148.238 181.719 1 59.58 ? C15 1N7 1504 J 1 HETATM 16 C C16 1N7 . . . L 7 173.739 148.636 180.329 1 59.58 ? C16 1N7 1504 J 1 HETATM 17 C C17 1N7 . . . L 7 172.971 149.924 180.328 1 59.58 ? C17 1N7 1504 J 1 HETATM 18 C C18 1N7 . . . L 7 173.895 151.006 180.907 1 59.58 ? C18 1N7 1504 J 1 HETATM 19 C C19 1N7 . . . L 7 174.133 150.643 182.372 1 59.58 ? C19 1N7 1504 J 1 HETATM 20 C C20 1N7 . . . L 7 174.415 156.053 180.238 1 59.58 ? C20 1N7 1504 J 1 HETATM 21 C C21 1N7 . . . L 7 174.869 156.635 181.572 1 59.58 ? C21 1N7 1504 J 1 HETATM 22 C C22 1N7 . . . L 7 173.677 157.184 179.424 1 59.58 ? C22 1N7 1504 J 1 HETATM 23 C C23 1N7 . . . L 7 174.347 157.399 178.034 1 59.58 ? C23 1N7 1504 J 1 HETATM 24 C C24 1N7 . . . L 7 175.682 158.136 178.209 1 59.58 ? C24 1N7 1504 J 1 HETATM 25 O O2 1N7 . . . L 7 172.87 146.159 184.314 1 59.58 ? O2 1N7 1504 J 1 HETATM 26 O O3 1N7 . . . L 7 171.753 149.811 181.011 1 59.58 ? O3 1N7 1504 J 1 HETATM 27 O O4 1N7 . . . L 7 172.946 153.778 183.063 1 59.58 ? O4 1N7 1504 J 1 HETATM 28 H H1 1N7 . . . L 7 175.901 148.487 184.065 1 59.58 ? H1 1N7 1504 J 1 HETATM 29 H H2 1N7 . . . L 7 175.328 149.848 184.58 1 59.58 ? H2 1N7 1504 J 1 HETATM 30 H H3 1N7 . . . L 7 175.746 152.118 183.214 1 59.58 ? H3 1N7 1504 J 1 HETATM 31 H H4 1N7 . . . L 7 174.505 152.06 184.171 1 59.58 ? H4 1N7 1504 J 1 HETATM 32 H H5 1N7 . . . L 7 174.783 154.274 182.897 1 59.58 ? H5 1N7 1504 J 1 HETATM 33 H H6 1N7 . . . L 7 172.512 152.415 181.135 1 59.58 ? H6 1N7 1504 J 1 HETATM 34 H H7 1N7 . . . L 7 173.965 152.359 178.685 1 59.58 ? H7 1N7 1504 J 1 HETATM 35 H H8 1N7 . . . L 7 172.372 152.26 178.847 1 59.58 ? H8 1N7 1504 J 1 HETATM 36 H H9 1N7 . . . L 7 173.637 154.656 178.426 1 59.58 ? H9 1N7 1504 J 1 HETATM 37 H H10 1N7 . . . L 7 172.153 154.617 179.001 1 59.58 ? H10 1N7 1504 J 1 HETATM 38 H H11 1N7 . . . L 7 172.779 155.086 180.986 1 59.58 ? H11 1N7 1504 J 1 HETATM 39 H H12 1N7 . . . L 7 176.113 152.575 180.933 1 59.58 ? H12 1N7 1504 J 1 HETATM 40 H H13 1N7 . . . L 7 175.732 153.534 179.739 1 59.58 ? H13 1N7 1504 J 1 HETATM 41 H H14 1N7 . . . L 7 176.22 154.123 181.11 1 59.58 ? H14 1N7 1504 J 1 HETATM 42 H H15 1N7 . . . L 7 176.898 150.146 182.854 1 59.58 ? H15 1N7 1504 J 1 HETATM 43 H H16 1N7 . . . L 7 176.87 148.842 181.981 1 59.58 ? H16 1N7 1504 J 1 HETATM 44 H H17 1N7 . . . L 7 176.538 150.236 181.336 1 59.58 ? H17 1N7 1504 J 1 HETATM 45 H H18 1N7 . . . L 7 174.173 148.049 185.544 1 59.58 ? H18 1N7 1504 J 1 HETATM 46 H H19 1N7 . . . L 7 173.142 148.848 184.645 1 59.58 ? H19 1N7 1504 J 1 HETATM 47 H H20 1N7 . . . L 7 174.612 146.602 183.633 1 59.58 ? H20 1N7 1504 J 1 HETATM 48 H H21 1N7 . . . L 7 172.903 146.8 181.923 1 59.58 ? H21 1N7 1504 J 1 HETATM 49 H H22 1N7 . . . L 7 172.504 148.177 182.59 1 59.58 ? H22 1N7 1504 J 1 HETATM 50 H H23 1N7 . . . L 7 175.019 147.583 181.579 1 59.58 ? H23 1N7 1504 J 1 HETATM 51 H H24 1N7 . . . L 7 174.473 148.727 179.708 1 59.58 ? H24 1N7 1504 J 1 HETATM 52 H H25 1N7 . . . L 7 173.146 147.937 180.016 1 59.58 ? H25 1N7 1504 J 1 HETATM 53 H H26 1N7 . . . L 7 172.788 150.085 179.406 1 59.58 ? H26 1N7 1504 J 1 HETATM 54 H H27 1N7 . . . L 7 174.687 150.926 180.384 1 59.58 ? H27 1N7 1504 J 1 HETATM 55 H H28 1N7 . . . L 7 173.287 150.438 182.787 1 59.58 ? H28 1N7 1504 J 1 HETATM 56 H H29 1N7 . . . L 7 175.191 155.825 179.717 1 59.58 ? H29 1N7 1504 J 1 HETATM 57 H H30 1N7 . . . L 7 174.131 156.586 182.193 1 59.58 ? H30 1N7 1504 J 1 HETATM 58 H H31 1N7 . . . L 7 175.608 156.121 181.916 1 59.58 ? H31 1N7 1504 J 1 HETATM 59 H H32 1N7 . . . L 7 175.165 157.552 181.484 1 59.58 ? H32 1N7 1504 J 1 HETATM 60 H H33 1N7 . . . L 7 172.744 156.968 179.302 1 59.58 ? H33 1N7 1504 J 1 HETATM 61 H H34 1N7 . . . L 7 173.719 158.027 179.896 1 59.58 ? H34 1N7 1504 J 1 HETATM 62 H H35 1N7 . . . L 7 174.502 156.553 177.593 1 59.58 ? H35 1N7 1504 J 1 HETATM 63 H H36 1N7 . . . L 7 173.773 157.938 177.472 1 59.58 ? H36 1N7 1504 J 1 HETATM 64 H H43 1N7 . . . L 7 172.844 145.461 183.827 1 59.58 ? H43 1N7 1504 J 1 HETATM 65 H H44 1N7 . . . L 7 171.647 150.493 181.499 1 59.58 ? H44 1N7 1504 J 1 HETATM 66 H H45 1N7 . . . L 7 172.599 153.018 183.223 1 59.58 ? H45 1N7 1504 J 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 75 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 66 #