data_6N5U # _model_server_result.job_id Mh4LqEaU1NoqLYiJ29Z5xA _model_server_result.datetime_utc '2025-08-31 02:17:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n5u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 6N5U # _exptl.entry_id 6N5U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (I) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.75 _cell.angle_gamma 90 _cell.entry_id 6N5U _cell.length_a 53.65 _cell.length_b 80.44 _cell.length_c 72.31 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N5U _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 42 A CYS 42 1_555 D CU CU1 . A CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc2 A SG CYS 46 A CYS 46 1_555 D CU CU1 . A CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 A NE2 HIS 131 A HIS 131 1_555 D CU CU1 . A CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc4 B SG CYS 42 B CYS 42 1_555 E CU CU1 . B CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc5 B SG CYS 46 B CYS 46 1_555 E CU CU1 . B CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc6 B NE2 HIS 131 B HIS 131 1_555 E CU CU1 . B CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc7 C SG CYS 42 C CYS 42 1_555 F CU CU1 . C CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 C SG CYS 46 C CYS 46 1_555 F CU CU1 . C CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc9 C NE2 HIS 131 C HIS 131 1_555 F CU CU1 . C CU1 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? # _chem_comp.formula 'Cu 1' _chem_comp.formula_weight 63.546 _chem_comp.id CU1 _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (I) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6N5U _atom_sites.fract_transf_matrix[1][1] 0.018639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001549 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012432 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013877 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CU1 A 1 201 1 CU1 CU1 . E 2 CU1 B 1 201 2 CU1 CU1 . F 2 CU1 C 1 201 3 CU1 CU1 . G 3 HOH A 1 301 62 HOH HOH . G 3 HOH A 2 302 49 HOH HOH . G 3 HOH A 3 303 71 HOH HOH . G 3 HOH A 4 304 10 HOH HOH . G 3 HOH A 5 305 63 HOH HOH . G 3 HOH A 6 306 72 HOH HOH . G 3 HOH A 7 307 22 HOH HOH . G 3 HOH A 8 308 88 HOH HOH . G 3 HOH A 9 309 38 HOH HOH . G 3 HOH A 10 310 43 HOH HOH . G 3 HOH A 11 311 51 HOH HOH . G 3 HOH A 12 312 61 HOH HOH . G 3 HOH A 13 313 37 HOH HOH . G 3 HOH A 14 314 57 HOH HOH . G 3 HOH A 15 315 81 HOH HOH . G 3 HOH A 16 316 19 HOH HOH . G 3 HOH A 17 317 77 HOH HOH . G 3 HOH A 18 318 50 HOH HOH . G 3 HOH A 19 319 7 HOH HOH . G 3 HOH A 20 320 42 HOH HOH . G 3 HOH A 21 321 21 HOH HOH . G 3 HOH A 22 322 15 HOH HOH . G 3 HOH A 23 323 66 HOH HOH . G 3 HOH A 24 324 89 HOH HOH . G 3 HOH A 25 325 27 HOH HOH . G 3 HOH A 26 326 82 HOH HOH . H 3 HOH B 1 301 5 HOH HOH . H 3 HOH B 2 302 1 HOH HOH . H 3 HOH B 3 303 20 HOH HOH . H 3 HOH B 4 304 24 HOH HOH . H 3 HOH B 5 305 76 HOH HOH . H 3 HOH B 6 306 30 HOH HOH . H 3 HOH B 7 307 80 HOH HOH . H 3 HOH B 8 308 85 HOH HOH . H 3 HOH B 9 309 41 HOH HOH . H 3 HOH B 10 310 3 HOH HOH . H 3 HOH B 11 311 52 HOH HOH . H 3 HOH B 12 312 46 HOH HOH . H 3 HOH B 13 313 75 HOH HOH . H 3 HOH B 14 314 11 HOH HOH . H 3 HOH B 15 315 36 HOH HOH . H 3 HOH B 16 316 55 HOH HOH . H 3 HOH B 17 317 79 HOH HOH . H 3 HOH B 18 318 54 HOH HOH . H 3 HOH B 19 319 29 HOH HOH . H 3 HOH B 20 320 74 HOH HOH . H 3 HOH B 21 321 39 HOH HOH . H 3 HOH B 22 322 28 HOH HOH . H 3 HOH B 23 323 56 HOH HOH . H 3 HOH B 24 324 32 HOH HOH . H 3 HOH B 25 325 47 HOH HOH . H 3 HOH B 26 326 40 HOH HOH . H 3 HOH B 27 327 44 HOH HOH . H 3 HOH B 28 328 86 HOH HOH . H 3 HOH B 29 329 84 HOH HOH . H 3 HOH B 30 330 91 HOH HOH . H 3 HOH B 31 331 6 HOH HOH . I 3 HOH C 1 301 9 HOH HOH . I 3 HOH C 2 302 17 HOH HOH . I 3 HOH C 3 303 26 HOH HOH . I 3 HOH C 4 304 2 HOH HOH . I 3 HOH C 5 305 67 HOH HOH . I 3 HOH C 6 306 25 HOH HOH . I 3 HOH C 7 307 68 HOH HOH . I 3 HOH C 8 308 4 HOH HOH . I 3 HOH C 9 309 83 HOH HOH . I 3 HOH C 10 310 34 HOH HOH . I 3 HOH C 11 311 48 HOH HOH . I 3 HOH C 12 312 64 HOH HOH . I 3 HOH C 13 313 14 HOH HOH . I 3 HOH C 14 314 33 HOH HOH . I 3 HOH C 15 315 13 HOH HOH . I 3 HOH C 16 316 12 HOH HOH . I 3 HOH C 17 317 23 HOH HOH . I 3 HOH C 18 318 45 HOH HOH . I 3 HOH C 19 319 58 HOH HOH . I 3 HOH C 20 320 16 HOH HOH . I 3 HOH C 21 321 18 HOH HOH . I 3 HOH C 22 322 31 HOH HOH . I 3 HOH C 23 323 90 HOH HOH . I 3 HOH C 24 324 70 HOH HOH . I 3 HOH C 25 325 8 HOH HOH . I 3 HOH C 26 326 87 HOH HOH . I 3 HOH C 27 327 73 HOH HOH . I 3 HOH C 28 328 59 HOH HOH . I 3 HOH C 29 329 69 HOH HOH . I 3 HOH C 30 330 35 HOH HOH . I 3 HOH C 31 331 78 HOH HOH . I 3 HOH C 32 332 53 HOH HOH . I 3 HOH C 33 333 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU1 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -8.918 _atom_site.Cartn_y -4.417 _atom_site.Cartn_z -25.68 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 58.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU1 _atom_site.auth_seq_id 201 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #