data_6N5V # _model_server_result.job_id 2_EMPPxmunec3pJsM63dzA _model_server_result.datetime_utc '2025-03-05 18:16:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n5v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 6N5V # _exptl.entry_id 6N5V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.216 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(1H-indol-4-yl)ethan-1-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6N5V _cell.length_a 150.4 _cell.length_b 150.4 _cell.length_c 122.61 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N5V _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 61 A CYS 89 1_555 A SG CYS 73 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf2 B SG CYS 61 B CYS 89 1_555 B SG CYS 73 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? # _chem_comp.formula 'C10 H12 N2' _chem_comp.formula_weight 160.216 _chem_comp.id KDY _chem_comp.mon_nstd_flag . _chem_comp.name 2-(1H-indol-4-yl)ethan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 KDY sing 173 n n C5 C4 KDY doub 174 n y C5 C6 KDY sing 175 n y C4 C3 KDY sing 176 n y C6 C7 KDY doub 177 n y C1 C2 KDY sing 178 n n C3 C2 KDY sing 179 n n C3 C10 KDY doub 180 n y C7 C10 KDY sing 181 n y C7 N2 KDY sing 182 n y C10 C9 KDY sing 183 n y N2 C8 KDY sing 184 n y C9 C8 KDY doub 185 n y C1 H1 KDY sing 186 n n C1 H2 KDY sing 187 n n C2 H3 KDY sing 188 n n C2 H4 KDY sing 189 n n C4 H5 KDY sing 190 n n C5 H6 KDY sing 191 n n C6 H7 KDY sing 192 n n C8 H8 KDY sing 193 n n C9 H9 KDY sing 194 n n N1 H10 KDY sing 195 n n N1 H11 KDY sing 196 n n N2 H13 KDY sing 197 n n # _atom_sites.entry_id 6N5V _atom_sites.fract_transf_matrix[1][1] 0.006649 _atom_sites.fract_transf_matrix[1][2] 0.003839 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007678 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KDY A 1 401 1 KDY UNL . D 2 KDY B 1 401 2 KDY UNL . E 3 HOH A 1 501 2 HOH HOH . E 3 HOH A 2 502 7 HOH HOH . E 3 HOH A 3 503 3 HOH HOH . E 3 HOH A 4 504 1 HOH HOH . E 3 HOH A 5 505 4 HOH HOH . E 3 HOH A 6 506 9 HOH HOH . F 3 HOH B 1 501 6 HOH HOH . F 3 HOH B 2 502 8 HOH HOH . F 3 HOH B 3 503 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 KDY . . . D 2 48.928 0.126 -6.492 1 99.8 ? C1 KDY 401 B 1 HETATM 2 C C10 KDY . . . D 2 52.565 -0.223 -7.367 1 99.8 ? C10 KDY 401 B 1 HETATM 3 C C2 KDY . . . D 2 50.293 -0.528 -6.212 1 94.69 ? C2 KDY 401 B 1 HETATM 4 C C3 KDY . . . D 2 51.214 -0.637 -7.41 1 99.89 ? C3 KDY 401 B 1 HETATM 5 C C4 KDY . . . D 2 50.748 -1.152 -8.614 1 101.84 ? C4 KDY 401 B 1 HETATM 6 C C5 KDY . . . D 2 51.557 -1.27 -9.742 1 102.41 ? C5 KDY 401 B 1 HETATM 7 C C6 KDY . . . D 2 52.865 -0.878 -9.722 1 100.13 ? C6 KDY 401 B 1 HETATM 8 C C7 KDY . . . D 2 53.365 -0.355 -8.528 1 100.84 ? C7 KDY 401 B 1 HETATM 9 C C8 KDY . . . D 2 54.638 0.534 -6.921 1 97.55 ? C8 KDY 401 B 1 HETATM 10 C C9 KDY . . . D 2 53.409 0.346 -6.361 1 98.99 ? C9 KDY 401 B 1 HETATM 11 N N1 KDY . . . D 2 48.054 -0.577 -7.448 1 93.34 ? N1 KDY 401 B 1 HETATM 12 N N2 KDY . . . D 2 54.623 0.113 -8.224 1 98.24 ? N2 KDY 401 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #